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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000506_pilon:35062..41116- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035121 ID=XLOC_035121|Name=XLOC_035121|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6055bp|location=Sequence derived from alignment at sc0000506_pilon:35062..41116- (Clytia hemisphaerica_ch_hm2_pilon)
GATTCAACGACCTACCAAAGCGTATTAACTGCCATGAACCTACCGTCGCC
CAAAATCCTCTACCCTTTTGCTAATGTCAAAGAAGAGTTTTTGTTGGCGG
ACTACGGACCAAACAATTTAAACCTCCAGAAGCAAAATGAAAACGTGAAA
GTTGTTTCCAACAATCACAACCGCTTTGGATTGCCAGATCACTCTGCGAC
CATCCATGGTGGTGATTCGTACGCCCTTTTTCAAGAAGACTGTTCAAGCG
TTACTGACGCTCTCACTCAGTTTACCATCTTGCTGCAGTATCATGATTTC
AATGTTGCGGGCGGCTATCAACACCGAGGCATTCGGTTTATAAGTGGATA
TGGTGGCACTGACCAACAGTTCCTGCATTTCCAGTCTTCTGGAAAACTTA
TTTTAAGGTATGTATTTTATGGTAAATATACGAAATGATAATGCCTGAAA
CGAGACGATTCTTAAAGGAGATCTAACGGCAAAAATTTTGCTACATTTTT
TTTGGAAATTATGGAAACTTTATATTGTGGGGATTAAAATGAGCTATATT
ATGTTGAAAAATTTTAACTCAATAGGAAATTATATCCCTTTAAAGATTTA
AGCATGTGACGTCATTGCTGAACAACTTGTTTGCTAAACAAGATTTTCTC
TTTTTTTCTCTAAGAAAAAATTCTTGATAAAATCATTTAGCACATTCATT
TAGACTTCTAAATTCAGAGCAAAATGTCGTCGAGTGAATCTTCAAGTGAA
GAAAATGATTTCTCAGACATTTTTAACCATTCTACTGCTTCTACATTCTA
CGTATATCAAAATTATATTTTGCTATAAAACATCTTCTTTCCATAATTCT
TGTCTACAAAGAGTTTCTCTATCGAAATGAAAGTTCAGCGCTGACGTCAC
GAAACCCTCTTACTTTCAAATAAAGAGATATTTTAAACAATGATAATTCA
ATCAATATGAAAGATTTTGCACTCGTTCTTTTTTGGGGGGGGCGTACGGG
ATATCGGTACATCGGTATTGGCCTTTTTTTAGATCGGTAAATCGGTATTA
GAGGAAAAAAATGATCGGTACTCGGTATTTTAAGATCATCTCGGTATCGG
TAAAAGACCCTTTTTTATGTCGGTATTTCGGTATTTTTGGTCAACTATCG
GTATCACATCAAAGATCATTATCCAATTCGCCCCCAGACCAATTTTAGTG
AGATAAATTTTAAAATCGTGCAATTTTTTTTCGCTCGCGTCGCTCGCAAT
AAAGTTCTTTCACAAGCCAATACACTCTTCTCGAGATGCATAAAAGCATT
GCAGGCCTCGTTTTCAAATAATCTTGCTTAAGTAACTCAACGTCATTTGA
CATCATTATCTTTTGTGAATCATTATCTTTTGTGAATGTGCGTGCTTTTG
TTTTAAAACTTCCTTTTGGGAATGCATTTACGTCTACGTAAATTGAATGT
TAAATAATTGTTCTGCTTGCGAACGAGGCTTGCAATGTTTTTTATACATC
TCGAGAAGAGTGTATTTGGCGAACACAATATTTAAAACAAAAAATCTAAT
TTTTTTGCTCGCTTTGCTCGCAGTAGCTTCTTCGAAATAATCTTGATAAG
TATCAAATTCATGGCTTTTTAAAGAGTTTTTGTTATTTGGTTGACTTTCA
AAAATTTTCTATTTGGCCATAACCTCCTTTTCTATTCGAATATATGAACG
ATATGTTCTGAGCGCTGATCTACTAAATAATCCCTCCCTCATACGTAAAT
TAGTACAAATTAAGGAACACTCAGGGGCGCCAATTTGAATTTGAAATCAT
TCCTGCAATTTTGATAAGGCAAGAGGCTCAGCCAGGGGTCTGCTTGACAC
GTGAATGACCATTTTTCTGCCGTGAATACAGTTGACGCTCTCTAAATTGA
CGTTGTACTCTTTGATAAGCTCCAATTTTCGATCCATTGGCGTTGTGACA
GGGCCACGCCTCCCCAAGTTGAACCTTTTTGAACGCCCAAATCTTAAAAT
TACCCTAAATTCGCTTTAAATTGCGTCCCACGACCAGAAATAACTTTAAA
AATCATGAAATTTTTTTCGCTCGCTTCGCTCGCAATAGTTTCTTTCAATT
TGTTTGATCTAGAGATTCAGAGTAGAGATTCTAGAGTATCAAATTTATAT
CTTTATCCGTTACTTTCTATTATTCGACATTCTATCATTCGATAAGCTCC
CATTTTCGATGAAAGTTCTAGGTCGGTCCCTTGATGGAATTCCGTTCTCT
TATTCGATTTCTAGCATCTTACTAAAGTTTTGGTTAAATTTAAGCTCTAT
TCTGGAAAAAATTTTCGCTCGCTTCGATCGCGTCAAACAGAGTGGTTGTG
TTTTGTTCCTTTTCTTCTCAAAAATTTTGTGCTCGCATCGCTCCCATTTC
AATATCATTATACTGTACTAGCAGTTTTTGTGACCTTTTCCTGGCTACCT
TTGACCTTTTTAAGGCCTCCTTTAAGCTGTTTAACCTTTCTTAGACCAAA
ATTTTCGCATGCGGCGCCAAGATTACAAAGAAAACTCTCTGCGACATGAA
ATTTTATGCTTTCTGTACTTTTTGTGACCTTATTCTTGCTAACTTTGAGC
TTGCTTAGAGCAAAAATTTACGCCTGCGGCGCATAAGTTACGAAAAAAAC
TTTCTCTGAAAATTTCCCCTAAAAACTTTTCCAATCTCGCCCCCTCCCCG
AAACGAGAGAGACCACGCCTCTGCTAGGCTTTACTCAATCCATCTCGATG
AACAATGTCGCAAATTTTTCTTGCTCGCTTCACTCGCATTTCCTAAATGT
TTCTAAAATGACCTAAATTTTAACTTCGAATTTAGGTATACGAATGAGAC
CAAAAAGGGGGCGCAAGAATAAGCCTACAAGGGGGCGACTTAAGCCAAAA
TTCAACTTTGCTTCCCCAGCATGTACCTACCCAGCACGCTACTGTTTGGT
GATCGTTATAGAGACTTTGGATGATGAAAAACCCAACATTTATCGTCCAC
ACATACCAAGCACTCATTTTTTTTTGCCTAAGTACCCCCTCCGGGGGACG
AGTACCTGAAAAATGGGGAAAAATTGATCGGTATCGGTATTTGAACGAAA
AATTTATCGGCATATCGGTAATTGAGAGAAAAAGTGATCGGTATATCGGT
ATTACGAAGTCCCGTACGCCCCCCACTTTTTGCAATGTTTTTTATTTAAT
TAGGCCTGTACTCTGTCAAAAAATAAGGATAAAGAAATTTTTGCCGTTAG
ATCTCCTTTAACAAGAAAGTGTCCAGGGCAAAAATTTGCCGAAAATTCAC
CGAAATGATTGTTGATTCTTTGGCGTTCGTTCATTTAGTTAGAATAATAA
ACTAGTAGACGAAATGGCTCCCTGGTACGAAAAAGTCAAGCTCGAAAAAA
AAAACTTGGTCTATCAGCATCTTTTTGTGGATATTTGAAAGGATTTTCAA
AATTTCAAAACTTTCCCTACAAAAAAGGAGCTTTTTATAGGCTAGACGCA
TGGCTGCGTGTCAGTTGCTATACTGCCTCGAAAATCGATTAATTGTGAAG
AAAATCTAACTATTCATTTTTTAGACTCGTTGGCAACGGAGGTTCGCCAA
GTGGTGACCATGAGCTGGCCACTTTAGAATTTCAGAAGACAAATTATGTT
GCTTTGGTTTATGACAACGGGAGATTGATTTGTTATGTCAATAATCAGGT
AATTACTGTATGCGAGTCCCAAACTCCTGACCCTTTCATGAAATGCCCCT
TGCTCTTTGCTTTCCACGGATCTCTGTAGCTTAGGTCTTCTTAGATCTTT
ACATAGAAAACGGCAAAAAAAGTTTTAATCGATATTGCATGAAAATTGAC
CAGATAATTTTCAACTTTAATTTTTAATGATGATTCCATTGCAGGTGGCG
TATGATAGCTCCTTGACCATCATTATTCAAAGGCGGATCGAGTTCGCAAC
AGAAGATGGAAATCAGGCTGCCATATCTTGTTTCCAATTCTACGATCAAG
TTCTCAACAGCATGCAAATCAAAGCGTTAGAGCTTTGTCCGAACTTACAA
AGTAATAAAGTATTATCTTTCTTTTTTTGTGTTTATGGAGAATATATATC
ATCATACGCTTAAATCGGAACTCTCAAATTCTCGCATGAAGCTTTTTCGC
CGGTGCCAGGTCAGCATTTTATTAAAAGCTAGGCCTATTCGTCTTGCTTA
TTGTTTTGTTTTCTTCAACTTTTAGATGGAGCTTTTTACAACAACGTTGA
ATGTGAGAACGGAGGCGTACACGTCTTCCCGTACCAGGACTGTCTTTGTC
CCGGTGATCATGTGACTAAAACAACCACCTGCACTAATGGTAAGAACTTT
TGTTCATACTACCTCCTGCTTTACTCTATTCGTTACTTCATTTGTCAAAA
AATCATTATTTGAAGTCCCGAAGAAACAAAATGGATTTTGTTTTATCGAC
ATTGACAATACAATCCACTACAAATAACCAGATTCTCCTGCGTTTTCCAA
TGTTTACCGTAGGGGGCGGTCCAGATGCTACACTTTTCATAAGAAACTCC
CCCTTCACGTTTTTACATCCACCTTTTTTCAGATTTTCCACAGTTCGAAA
ACGCTCTTCTTTACATTCCCATGGATGAAGATTTGGAGAGCAGCAAAGGC
TCTTTCACTCCTGGTTCACCTTCAAATAAAGAATCGCAACCAAGTCCTGT
CAATAATGCACAGTGTATAACACAAGATGGCTCACTGACCTCCATTGGTA
CTTTCACACATAGTTGTCTCTCCGATTTCACCGGCTGCCCTGAAGGTTAC
GTCTTCAACTTCTGGGTGAAATTTGACTCCCATTCAGTACATGATACGAA
AATCCATGTCTTGAAACTGGGCGAAATGTCATGGTTTAACACTTACAAAG
TGAGCGGAGATGTAGAGGCACGCATCGAATGGCAATCAGAGGATATCTGT
TTCATGGAGTTTGCGTGTCCCGTCAACGCGTGGGCTTACGTCTCTCTACA
TGTCAATGAAACGCACCTCAACCTGCTCATTAACGGAGAAGAGGTGACCG
ATAAAACTGCCAATTGCACGGTACCGGAAACACGATCACCTCAACTTCAG
ATCAAAGTGGGTGGTGTTTCTGCGCCTATTTGTTTGGATGATATTTCACT
TGTCCCTGTGGAAAGTATGGAAGACGTGATCACTTTATATCGCTCGCTCA
CTGCTGATGGTAAGTCAATTGTTGCAACAACGTTCTAATTATTTTCAAAT
ACTTCAAATAAAAAATTATAGTTCTACATACAAGTACTAGTCAAATAATA
AATGTCAGAATTCGGGATAAACTTTTTGTTTGTTGGGTGAGCTAGTTCTC
ATTTGTAATTCAAATACTGCAAGTGGGTGTCTGCTTGAAAATTTTTGCTG
AGTGATGTTCCAAGAAGGAGTTTCGTAGTTGCAAGAAAAAAGTTTTCTCT
CTTTTTTTTGAAGCAACGGATATGAACAGACACAACAAAGCGGCCACCAT
TGGGTTGCGTGTGACCGGAGATTTCAGCGATCTCATCCAGGACGAACTGT
TCAACCAGCACATCCCAGAAGCGTTAACGCATGCCAGATTGAGAGATTTG
ATCAACTCTACCGTAAGTCAGCAACCATTTATTTGCAATGTCCCCTTAAT
GATCTGTGGTGCAGTGATCAAATGTAATTAAAACATGGAAATATTAACAC
CTCTCTGGACAGCAGAAATGCTTATTTTTGAAAGAAGAAATGAGAATGTC
ACACGACGTCCCGCTGCATCTCATGTATGTGAGCTAACCTTTTCAATTGG
AAACGGTGCCCAAATCGAGCTCCAAATCAAAATTTCATACTAGCTTACTA
GCTGAACGAGAGCTTGGGGAGGCTCAGTTTTTTAGATATAACTATTAATC
ATTGCCATCAAGTGTTCAATATTTGTGTTGTCCCCGATCAGCATCTATCA
TCTATCGAAATTTGTGTTTATTTTCAGATTGGAGACCTGCAAGAGAAAGC
CCGGGACGATGGATTGATGCTGTATAGCCAATCTACAATCAAAAAGATTA
AATTT Coding sequence (CDS) from alignment at sc0000506_pilon:35062..41116- >XLOC_035121 ID=XLOC_035121|Name=XLOC_035121|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3312bp|location=Sequence derived from alignment at sc0000506_pilon:35062..41116- (Clytia hemisphaerica_ch_hm2_pilon)
GATTCAACGACCTACCAAAGCGTATTAACTGCCATGAACCTACCGTCGCC
CAAAATCCTCTACCCTTTTGCTAATGTCAAAGAAGAGTTTTTGTTGGCGG
ACTACGGACCAAACAATTTAAACCTCCAGAAGCAAAATGAAAACGTGAAA
GTTGTTTCCAACAATCACAACCGCTTTGGATTGCCAGATCACTCTGCGAC
CATCCATGGTGGTGATTCGTACGCCCTTTTTCAAGAAGACTGTTCAAGCG
TTACTGACGCTCTCACTCAGTTTACCATCTTGCTGCAGTATCATGATTTC
AATGTTGCGGGCGGCTATCAACACCGAGGCATTCGGTTTATAAGTGGATA
TGGTGGCACTGACCAACAGTTCCTGCATTTCCAGTCTTCTGGAAAACTTA
TTTTAAGGATTCAACGACCTACCAAAGCGTATTAACTGCCATGAACCTAC
CGTCGCCCAAAATCCTCTACCCTTTTGCTAATGTCAAAGAAGAGTTTTTG
TTGGCGGACTACGGACCAAACAATTTAAACCTCCAGAAGCAAAATGAAAA
CGTGAAAGTTGTTTCCAACAATCACAACCGCTTTGGATTGCCAGATCACT
CTGCGACCATCCATGGTGGTGATTCGTACGCCCTTTTTCAAGAAGACTGT
TCAAGCGTTACTGACGCTCTCACTCAGTTTACCATCTTGCTGCAGTATCA
TGATTTCAATGTTGCGGGCGGCTATCAACACCGAGGCATTCGGTTTATAA
GTGGATATGGTGGCACTGACCAACAGTTCCTGCATTTCCAGTCTTCTGGA
AAACTTATTTTAAGACTCGTTGGCAACGGAGGTTCGCCAAGTGGTGACCA
TGAGCTGGCCACTTTAGAATTTCAGAAGACAAATTATGTTGCTTTGGTTT
ATGACAACGGGAGATTGATTTGTTATGTCAATAATCAGACTCGTTGGCAA
CGGAGGTTCGCCAAGTGGTGACCATGAGCTGGCCACTTTAGAATTTCAGA
AGACAAATTATGTTGCTTTGGTTTATGACAACGGGAGATTGATTTGTTAT
GTCAATAATCAGGTGGCGTATGATAGCTCCTTGACCATCATTATTCAAAG
GCGGATCGAGTTCGCAACAGAAGATGGAAATCAGGCTGCCATATCTTGTT
TCCAATTCTACGATCAAGTTCTCAACAGCATGCAAATCAAAGCGTTAGAG
CTTTGTCCGAACTTACAAAGTGGCGTATGATAGCTCCTTGACCATCATTA
TTCAAAGGCGGATCGAGTTCGCAACAGAAGATGGAAATCAGGCTGCCATA
TCTTGTTTCCAATTCTACGATCAAGTTCTCAACAGCATGCAAATCAAAGC
GTTAGAGCTTTGTCCGAACTTACAAAATGGAGCTTTTTACAACAACGTTG
AATGTGAGAACGGAGGCGTACACGTCTTCCCGTACCAGGACTGTCTTTGT
CCCGGTGATCATGTGACTAAAACAACCACCTGCACTAATGATGGAGCTTT
TTACAACAACGTTGAATGTGAGAACGGAGGCGTACACGTCTTCCCGTACC
AGGACTGTCTTTGTCCCGGTGATCATGTGACTAAAACAACCACCTGCACT
AATGATTTTCCACAGTTCGAAAACGCTCTTCTTTACATTCCCATGGATGA
AGATTTGGAGAGCAGCAAAGGCTCTTTCACTCCTGGTTCACCTTCAAATA
AAGAATCGCAACCAAGTCCTGTCAATAATGCACAGTGTATAACACAAGAT
GGCTCACTGACCTCCATTGGTACTTTCACACATAGTTGTCTCTCCGATTT
CACCGGCTGCCCTGAAGGTTACGTCTTCAACTTCTGGGTGAAATTTGACT
CCCATTCAGTACATGATACGAAAATCCATGTCTTGAAACTGGGCGAAATG
TCATGGTTTAACACTTACAAAGTGAGCGGAGATGTAGAGGCACGCATCGA
ATGGCAATCAGAGGATATCTGTTTCATGGAGTTTGCGTGTCCCGTCAACG
CGTGGGCTTACGTCTCTCTACATGTCAATGAAACGCACCTCAACCTGCTC
ATTAACGGAGAAGAGGTGACCGATAAAACTGCCAATTGCACGGTACCGGA
AACACGATCACCTCAACTTCAGATCAAAGTGGGTGGTGTTTCTGCGCCTA
TTTGTTTGGATGATATTTCACTTGTCCCTGTGGAAAGTATGGAAGACGTG
ATCACTTTATATCGCTCGCTCACTGCTGATGATTTTCCACAGTTCGAAAA
CGCTCTTCTTTACATTCCCATGGATGAAGATTTGGAGAGCAGCAAAGGCT
CTTTCACTCCTGGTTCACCTTCAAATAAAGAATCGCAACCAAGTCCTGTC
AATAATGCACAGTGTATAACACAAGATGGCTCACTGACCTCCATTGGTAC
TTTCACACATAGTTGTCTCTCCGATTTCACCGGCTGCCCTGAAGGTTACG
TCTTCAACTTCTGGGTGAAATTTGACTCCCATTCAGTACATGATACGAAA
ATCCATGTCTTGAAACTGGGCGAAATGTCATGGTTTAACACTTACAAAGT
GAGCGGAGATGTAGAGGCACGCATCGAATGGCAATCAGAGGATATCTGTT
TCATGGAGTTTGCGTGTCCCGTCAACGCGTGGGCTTACGTCTCTCTACAT
GTCAATGAAACGCACCTCAACCTGCTCATTAACGGAGAAGAGGTGACCGA
TAAAACTGCCAATTGCACGGTACCGGAAACACGATCACCTCAACTTCAGA
TCAAAGTGGGTGGTGTTTCTGCGCCTATTTGTTTGGATGATATTTCACTT
GTCCCTGTGGAAAGTATGGAAGACGTGATCACTTTATATCGCTCGCTCAC
TGCTGATGCAACGGATATGAACAGACACAACAAAGCGGCCACCATTGGGT
TGCGTGTGACCGGAGATTTCAGCGATCTCATCCAGGACGAACTGTTCAAC
CAGCACATCCCAGAAGCGTTAACGCATGCCAGATTGAGAGATTTGATCAA
CTCTACCCAACGGATATGAACAGACACAACAAAGCGGCCACCATTGGGTT
GCGTGTGACCGGAGATTTCAGCGATCTCATCCAGGACGAACTGTTCAACC
AGCACATCCCAGAAGCGTTAACGCATGCCAGATTGAGAGATTTGATCAAC
TCTACCATTGGAGACCTGCAAGAGAAAGCCCGGGACGATGGATTGATGCT
GTATAGCCAATCTACAATCAAAAAGATTAAATTTATTGGAGACCTGCAAG
AGAAAGCCCGGGACGATGGATTGATGCTGTATAGCCAATCTACAATCAAA
AAGATTAAATTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000506_pilon | genome | sc0000506_pilon:35062..41116 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1579-1656:79 |
| Aaloc | 1432-1578:591 |
| Aaloc | 805-1428:1472 |
| Aaloc | 691-801:1829 |
| Aaloc | 532-687:2162 |
| Aaloc | 409-531:2481 |
| Aaloc | 1-405:6056 |
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