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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000506_pilon:103465..105748- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035119 ID=XLOC_035119|Name=XLOC_035119|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2284bp|location=Sequence derived from alignment at sc0000506_pilon:103465..105748- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGGAACAGGACATCACAATACATCAAGGATGGCTGGAACTTTATTC
CGATTCGTCGTCCGGCGCATGGGGCAAACTGTCCGGTAAAAAGCAATGGA
AGAGAAGGTTTATTGTGTTCAACCAGTCAGCCAGTAATGAAGATGAATGC
TATTTGTTGTCTTACGAAAAAGAAGAGGCGTGGAGAGTTGCAATCCCCAA
AAGGAAACTTTCCTTGTATCCACGCTATAAAGTCTGCAAACTGAACGATT
TTAAAGGACGAGAGAAAGTTCTAGAGGTGAACAATGAACAAGAGAAATGG
TATTTTGCTTCTGATAAAATGAAACTGATCAATCTTTGGGCGTGCCAGAT
TCAAATGCAAACCAAATTGAGTCGATCGATATCAGGAAGGATCTTCAGCG
TTGTTGGTGCTTCTGTGAAAGACATGCATAATATAGGTGCTGCTCAGCAA
AGGTGTTTACTTCATTTCACCAAATGGGGTATCACATTAGCGCTTCAGCA
GTCCAGAGCTATTTTGGCCATGTGGCCGATAAAGACTATTCGAAATTACG
AGGATTCGGGACATTCTGAGTTCACCATTGAAGCTGGCAGGCGTGCACCG
ATGGGAGAAGGTGTATATAAATTTGAAACAAACGCTGGCCAAGATCGAGA
AATGTTTAATGTTGTCGACGCATTTGTTGCAGCGCTATTAGATGAGAAAG
CGCGCATTGCTGGTGCAAGTAAACAGACTACTGATGATGATATTCTCAAG
ATTTATGACCAACTGTATAAAACAGCCATCGGTGAAAACCAACCTCATCC
CCAGCCCCCACAACCTATGAACCAAAGACCTAAATTCCATAACCAGGATA
TGCATGACACACCAGGATACTCACATATCGGAATGAATTCTGCTACATTA
TCCACAAAAACCAGTGCAGATAACATGTCACACGTCCCCATGTACAAACC
CCCTGATTACGATAATTTATATGGTGAGGGAGTGGATTTTTCACGAGTGC
AACTTGACGACGAGAAAAAGCATTCGACTGGTTCCTATGGTGATTATTCA
CCTCGAGATCTTTCTTTCACTGAGCAAAATTACGATAAGTTGGGCGGAAG
AAATCCGAGTTGGGGCGGCTCATCTGATGGCGGGAAGGGCGAGTATGATC
ACATCAATTCGAATACTATCGGACGAAAGGTGGATAATACATACGACCAA
ATCGATCGCACTGGAACCAGCTTTAAGGTAAGCGCTTCCTCAAAATCTTC
AATACAGTGCCCCTTAAATAAACCAGTCATTATAATAGGGGCCATCCATA
TAGTACACAGTGAAGGAGTGAAAGGGGGTTTAGCAAAATTGTACGTTTAT
TGTTTAAATCGCCTAATTTCAAATATCGCTGCGTAAAAGGGGGAGGGGTA
TCAAATATTTGGAATTTTTTCGCGTACGTACCATGAGGACAACTCACACA
TAAGCAAACTAAGAGCATTTCGTTTTTTTTGAACGATGCTTAAAATTGCG
TGTTCCGAATTTATAATTATAGAATCAAATTTCCTGTTACGGTTATGACA
ATGAGTTATAGGTACCTAGTGTACGATACTGTTTGATAGATATAAACATA
CATAAATAAACTATCATTACTCCTTTAATTTTCACTAACCTGAATTTATT
CCTCATATAGGGTTTTTTTGTGTCTTGGAGATAACAACGAATTTCCAATT
TTAGGCAGTTGAAATATTTCGATTTCGTCTTCTTTTATCCATAGAAAAAG
CAAGGATCATGGGGTACAGCTGGCTACCCGTTACGCGACGAACCATCCGT
CCCCTGCTTGGATGACTACGACCACTCCTTCAAAGGGAGGAGTCCTATAC
AACAAACCCCTGAAAATGAAAAAGGCTTCATCTTCAGAAATTCCATCTAC
TCTCCTCTCGATTCTTCAAGTCGAAAAAACTCTTCAGCGTCCACAATACA
AGGGATCGGCTCTCGTCACGACTCCACTGCAAGTGAAGGGGGTCGACCAA
TGGGTGCCAGTGCACAGGGAATGGACATACGGCACGATTCAACGGCAAGC
GAAAGCGGACGTCAATTTAGACGTGGGATCAGTATAAAAGAACGTAGTCA
CCAAGATATCGCCGACCATTTCATGTATCAAGTTCCCTCGTCTTTGAACA
GTACCACCGATCAAGAGACGAGTTTTCAACAAGAAGAAGTTTATCAGAAC
ACTCAGGGCACTACTCCCGATGAAACATACAGTAACACGTCTTCCAGTCA
AAACACGAACTCAGAACGATCAACCACAGCGTGA Coding sequence (CDS) from alignment at sc0000506_pilon:103465..105748- >XLOC_035119 ID=XLOC_035119|Name=XLOC_035119|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3534bp|location=Sequence derived from alignment at sc0000506_pilon:103465..105748- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGGAACAGGACATCACAATACATCAAGGATGGCTGGAACTTTATTC
CGATTCGTCGTCCGGCGCATGGGGCAAACTGTCCGGTAAAAAGCAATGGA
AGAGAAGGTTTATTGTGTTCAACCAGTCAGCCAGTAATGAAGATGAATGC
TATTTGTTGTCTTACGAAAAAGAAGAGGCGTGGAGAGTTGCAATCCCCAA
AAGGAAACTTTCCTTGTATCCACGCTATAAAGTCTGCAAACTGAACGATT
TTAAAGGACGAGAGAAAGTTCTAGAGGTGAACAATGAACAAGAGAAATGG
TATTTTGCTTCTGATAAAATGAAACTGATCAATCTTTGGGCGTGCCAGAT
TCAAATGCAAACCAAATTGAGTCGATCGATATCAGGAAGGATCTTCAGCG
TTGTTGGTGCTTCTGTGAAAGACATGCATAATATAGGTGCTGCTCAGCAA
AGGTGTTTACTTCATTTCACCAAATGGGGTATCACATTAGCGCTTCAGCA
GTCCAGAGCTATTTTGGCCATGTGGCCGATAAAGACTATTCGAAATTACG
AGGATTCGGGACATTCTGAGTTCACCATTGAAGCTGGCAGGCGTGCACCG
ATGGGAGAAGGTGTATATAAATTTGAAACAAACGCTGGCCAAGATCGAGA
AATGTTTAATGTTGTCGACGCATTTGTTGCAGCGCTATTAGATGAGAAAG
CGCGCATTGCTGGTGCAAGTAAACAGACTACTGATGATGATATTCTCAAG
ATTTATGACCAACTGTATAAAACAGCCATCGGTGAAAACCAACCTCATCC
CCAGCCCCCACAACCTATGAACCAAAGACCTAAATTCCATAACCAGGATA
TGCATGACACACCAGGATACTCACATATCGGAATGAATTCTGCTACATTA
TCCACAAAAACCAGTGCAGATAACATGTCACACGTCCCCATGTACAAACC
CCCTGATTACGATAATTTATATGGTGAGGGAGTGGATTTTTCACGAGTGC
AACTTGACGACGAGAAAAAGCATTCGACTGGTTCCTATGGTGATTATTCA
CCTCGAGATCTTTCTTTCACTGAGCAAAATTACGATAAGTTGGGCGGAAG
AAATCCGAGTTGGGGCGGCTCATCTGATGGCGGGAAGGGCGAGTATGATC
ACATCAATTCGAATACTATCGGACGAAAGGTGGATAATACATACGACCAA
ATCGATCGCACTGGAACCAGCTTTAAGATGGTGGAACAGGACATCACAAT
ACATCAAGGATGGCTGGAACTTTATTCCGATTCGTCGTCCGGCGCATGGG
GCAAACTGTCCGGTAAAAAGCAATGGAAGAGAAGGTTTATTGTGTTCAAC
CAGTCAGCCAGTAATGAAGATGAATGCTATTTGTTGTCTTACGAAAAAGA
AGAGGCGTGGAGAGTTGCAATCCCCAAAAGGAAACTTTCCTTGTATCCAC
GCTATAAAGTCTGCAAACTGAACGATTTTAAAGGACGAGAGAAAGTTCTA
GAGGTGAACAATGAACAAGAGAAATGGTATTTTGCTTCTGATAAAATGAA
ACTGATCAATCTTTGGGCGTGCCAGATTCAAATGCAAACCAAATTGAGTC
GATCGATATCAGGAAGGATCTTCAGCGTTGTTGGTGCTTCTGTGAAAGAC
ATGCATAATATAGGTGCTGCTCAGCAAAGGTGTTTACTTCATTTCACCAA
ATGGGGTATCACATTAGCGCTTCAGCAGTCCAGAGCTATTTTGGCCATGT
GGCCGATAAAGACTATTCGAAATTACGAGGATTCGGGACATTCTGAGTTC
ACCATTGAAGCTGGCAGGCGTGCACCGATGGGAGAAGGTGTATATAAATT
TGAAACAAACGCTGGCCAAGATCGAGAAATGTTTAATGTTGTCGACGCAT
TTGTTGCAGCGCTATTAGATGAGAAAGCGCGCATTGCTGGTGCAAGTAAA
CAGACTACTGATGATGATATTCTCAAGATTTATGACCAACTGTATAAAAC
AGCCATCGGTGAAAACCAACCTCATCCCCAGCCCCCACAACCTATGAACC
AAAGACCTAAATTCCATAACCAGGATATGCATGACACACCAGGATACTCA
CATATCGGAATGAATTCTGCTACATTATCCACAAAAACCAGTGCAGATAA
CATGTCACACGTCCCCATGTACAAACCCCCTGATTACGATAATTTATATG
GTGAGGGAGTGGATTTTTCACGAGTGCAACTTGACGACGAGAAAAAGCAT
TCGACTGGTTCCTATGGTGATTATTCACCTCGAGATCTTTCTTTCACTGA
GCAAAATTACGATAAGTTGGGCGGAAGAAATCCGAGTTGGGGCGGCTCAT
CTGATGGCGGGAAGGGCGAGTATGATCACATCAATTCGAATACTATCGGA
CGAAAGGTGGATAATACATACGACCAAATCGATCGCACTGGAACCAGCTT
TAAGAAAAAGCAAGGATCATGGGGTACAGCTGGCTACCCGTTACGCGACG
AACCATCCGTCCCCTGCTTGGATGACTACGACCACTCCTTCAAAGGGAGG
AGTCCTATACAACAAACCCCTGAAAATGAAAAAGGCTTCATCTTCAGAAA
TTCCATCTACTCTCCTCTCGATTCTTCAAGTCGAAAAAACTCTTCAGCGT
CCACAATACAAGGGATCGGCTCTCGTCACGACTCCACTGCAAGTGAAGGG
GGTCGACCAATGGGTGCCAGTGCACAGGGAATGGACATACGGCACGATTC
AACGGCAAGCGAAAGCGGACGTCAATTTAGACGTGGGATCAGTATAAAAG
AACGTAGTCACCAAGATATCGCCGACCATTTCATGTATCAAGTTCCCTCG
TCTTTGAACAGTACCACCGATCAAGAGACGAGTTTTCAACAAGAAGAAGT
TTATCAGAACACTCAGGGCACTACTCCCGATGAAACATACAGTAACACGT
CTTCCAGTCAAAACACGAACTCAGAACGATCAACCACAGCGTGAAAAAAG
CAAGGATCATGGGGTACAGCTGGCTACCCGTTACGCGACGAACCATCCGT
CCCCTGCTTGGATGACTACGACCACTCCTTCAAAGGGAGGAGTCCTATAC
AACAAACCCCTGAAAATGAAAAAGGCTTCATCTTCAGAAATTCCATCTAC
TCTCCTCTCGATTCTTCAAGTCGAAAAAACTCTTCAGCGTCCACAATACA
AGGGATCGGCTCTCGTCACGACTCCACTGCAAGTGAAGGGGGTCGACCAA
TGGGTGCCAGTGCACAGGGAATGGACATACGGCACGATTCAACGGCAAGC
GAAAGCGGACGTCAATTTAGACGTGGGATCAGTATAAAAGAACGTAGTCA
CCAAGATATCGCCGACCATTTCATGTATCAAGTTCCCTCGTCTTTGAACA
GTACCACCGATCAAGAGACGAGTTTTCAACAAGAAGAAGTTTATCAGAAC
ACTCAGGGCACTACTCCCGATGAAACATACAGTAACACGTCTTCCAGTCA
AAACACGAACTCAGAACGATCAACCACAGCGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000506_pilon | genome | sc0000506_pilon:103465..105748 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1228-1767:541 |
| Aaloc | 1-1227:2285 |
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