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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000506_pilon:117366..119775+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035118 ID=XLOC_035118|Name=XLOC_035118|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2410bp|location=Sequence derived from alignment at sc0000506_pilon:117366..119775+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaatttttattggtATACATCTTACTGGGATACGTTGCAGTATTCGT
GAAGTCGCACAACGAATTCACACCTGAAGGGTGTTTATTGGTGCATAATG
AACTGAGGGCTTTGCACAAAGACACCCTATCCGTAGAATACGATGCGGAA
CTCGAAAAATCAGCGGAACAATCGGCAAATTTCGTGAAAGCTACGGGTGG
CGGTGAAGACACGTAAGTAAAGCCAgcaggaacagataatgtgatCAAAT
TTTGACTTATTCTAATATACAGTATTGTAGTTGACTCGTTTTAATATGAT
CGGTCACCCTTTTAAAGAGTAGAACTAAACGATTAAGAATTTCACTTGAA
ATCGTGAATATCTTTTGAATAGGTTTAAATCCTTCTCCTATCcttacata
tatattgtagattattttcaagcactgttttgaaatttggtcttcatgaa
aggaagttttctgttagagtagtctgagtcaaaaagaagaaagaagttta
ttatatttcacatatatttgttagctatttttgtccaaaatccttggctt
ttttaaaggttgggggatgccaagaaggggggatcatttaagaaggggga
tcagaccccaTTCCGCACTATGTCTTGATTTTAAGATTAAACTTAAAGAT
TAAAACAGAGTAACTTTCTTTTTTCCGACAGGCGACCGACGCGAGTATTA
CCAAAGCGACGCCGACGTCATGTTGaagatattgataaaaatgttcaCAT
TGAAAGTTGGGATGGCGATATCTACTATCCCGATACTTCGTAAGTTGAGT
TTTCCCCTCGTCCATGTTTCGTTATAATATTCGATTAAAAAACTATTTCC
AAATAGTGCAACTTTTGCTTGACAGGAATATAAAGCAATAAGATAATCCT
TCAATATtctaaaaatatattataagtAGCGAATTGAAATTTGTACGATG
CGACAAGCAACGATAATTATTCTACAATTTTTCAGGTTTACACCGCAAGG
GACTGGAGAGAGTATTCATAAAATGTGTTGTCGAACTGCACCTCATTGTC
CGAGAGAATTTTTCCACGGTCTCCTGTTTCCACCATCAGCTGAGGGTGTC
GTAAGAGATTTCTACAATGAGGAGATGAAAAGTTATGATTTTGCCAGTGG
GAAGAAGAAAGCTCAATTTTACACTCAAATTAAACATTTCACCAACATCG
TGTGGAAGAAAACTTCGAAGATCGGATGTTTTCAGACCAAGATGGATAGC
AATAATTGTGTTTACACCGTCATTCATTATAAAGAGAAAGGAAGCGAGGG
AACGCCTGAAATCTTCAAAGAAAATGTGGGAGTCCTGCGTAAGTTTCTTA
CCTTATCTCACTTATGGGAAAGATACAGAGGTAAATAGAATAAATCAGAA
CTTTAAAGAGGCCAGGTTTGCTAATTTTCTTTACACCCGTGATGTGACGT
CAAACATCTTTCAATGAATTGCCCTTAAAAGTGTATATGATTTTCATCTA
ATGGTTCAGTGGGTaaaatgataattgtgttgaaTAGACTTTTCTGTTTT
CTACATTCCAGTGGATTCAGAGGAGGACTCGACGAACATTGTGTTGATCT
TTTTGATCGTCTTTTTCATCGTTCTATTCTTGGTGTTGGTAATCTTGTGT
TATTGCTGCAGGGACCGGCTCTCCGAAAAATATTacgaaatcaaaatcaa
aactgaTACAATGAAGGCTGAGTAAGTACATAAGAAAGATCAGTTTCTAT
GAGTTTATACCCCTGTGTCGCAGACCCGCTGGGAGCCCAGCCCTACTGGA
AAGATTTGCAAACAtttccccggtgggaaaataccttagaatttcagccc
cacttggaaattaacttttatttaattatttcatTCACCTtagaacaaag
gaatttctatcatcattgggatttcaatacaggaatttttatccccactg
agaaaaaagttccaccggggttgtgagacaggggtatgaGTTAAGATGAC
ATGATAGATATAAGTAACTGTCTTCACATACATATAAACAATACAAAAAA
GGgtgtcttttcttcctgacCAGTCCTGACTGATATATAAACAATGCATA
ATCTTGAGCaccacgaatttttttcttttagtacGAGCTTTTAATTAGAC
ATATTTTTCGACCTGCTAACACAGCATACTTTTCTTTGGACAGGCAAGAA
TTGGAGACAGACTCCACAGCGTTCTGGTGgttaaagattttcaagaaaCG
ACGTCGAACAGTGAAACGACCGACACGTGCTCGATCAACGAAAACTCATC
AAAGTTTACGGGACCGAAACATTTCCATTGAAGTTGTGCATACAGTAAAA
CCACAGCGAAGCATCAAACAACCTCACCGTGCTCGTGGTCAAAGTACGCT
TCCCAAATTT Coding sequence (CDS) from alignment at sc0000506_pilon:117366..119775+ >XLOC_035118 ID=XLOC_035118|Name=XLOC_035118|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000506_pilon:117366..119775+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaatttttattggtATACATCTTACTGGGATACGTTGCAGTATTCGT
GAAGTCGCACAACGAATTCACACCTGAAGGGTGTTTATTGGTGCATAATG
AACTGAGGGCTTTGCACAAAGACACCCTATCCGTAGAATACGATGCGGAA
CTCGAAAAATCAGCGGAACAATCGGCAAATTTCGTGAAAGCTACGGGTGG
CGGTGAAGACACatgaaatttttattggtATACATCTTACTGGGATACGT
TGCAGTATTCGTGAAGTCGCACAACGAATTCACACCTGAAGGGTGTTTAT
TGGTGCATAATGAACTGAGGGCTTTGCACAAAGACACCCTATCCGTAGAA
TACGATGCGGAACTCGAAAAATCAGCGGAACAATCGGCAAATTTCGTGAA
AGCTACGGGTGGCGGTGAAGACACGCGACCGACGCGAGTATTACCAAAGC
GACGCCGACGTCATGTTGaagatattgataaaaatgttcaCATTGAAAGT
TGGGATGGCGATATCTACTATCCCGATACTTCGCGACCGACGCGAGTATT
ACCAAAGCGACGCCGACGTCATGTTGaagatattgataaaaatgttcaCA
TTGAAAGTTGGGATGGCGATATCTACTATCCCGATACTTCGTTTACACCG
CAAGGGACTGGAGAGAGTATTCATAAAATGTGTTGTCGAACTGCACCTCA
TTGTCCGAGAGAATTTTTCCACGGTCTCCTGTTTCCACCATCAGCTGAGG
GTGTCGTAAGAGATTTCTACAATGAGGAGATGAAAAGTTATGATTTTGCC
AGTGGGAAGAAGAAAGCTCAATTTTACACTCAAATTAAACATTTCACCAA
CATCGTGTGGAAGAAAACTTCGAAGATCGGATGTTTTCAGACCAAGATGG
ATAGCAATAATTGTGTTTACACCGTCATTCATTATAAAGAGAAAGGAAGC
GAGGGAACGCCTGAAATCTTCAAAGAAAATGTGGGAGTCCTGCGTTTACA
CCGCAAGGGACTGGAGAGAGTATTCATAAAATGTGTTGTCGAACTGCACC
TCATTGTCCGAGAGAATTTTTCCACGGTCTCCTGTTTCCACCATCAGCTG
AGGGTGTCGTAAGAGATTTCTACAATGAGGAGATGAAAAGTTATGATTTT
GCCAGTGGGAAGAAGAAAGCTCAATTTTACACTCAAATTAAACATTTCAC
CAACATCGTGTGGAAGAAAACTTCGAAGATCGGATGTTTTCAGACCAAGA
TGGATAGCAATAATTGTGTTTACACCGTCATTCATTATAAAGAGAAAGGA
AGCGAGGGAACGCCTGAAATCTTCAAAGAAAATGTGGGAGTCCTGCTGGA
TTCAGAGGAGGACTCGACGAACATTGTGTTGATCTTTTTGATCGTCTTTT
TCATCGTTCTATTCTTGGTGTTGGTAATCTTGTGTTATTGCTGCAGGGAC
CGGCTCTCCGAAAAATATTacgaaatcaaaatcaaaactgaTACAATGAA
GGCTGATGGATTCAGAGGAGGACTCGACGAACATTGTGTTGATCTTTTTG
ATCGTCTTTTTCATCGTTCTATTCTTGGTGTTGGTAATCTTGTGTTATTG
CTGCAGGGACCGGCTCTCCGAAAAATATTacgaaatcaaaatcaaaactg
aTACAATGAAGGCTGAGCAAGAATTGGAGACAGACTCCACAGCGTTCTGG
TGgttaaagattttcaagaaaCGACGTCGAACAGTGAAACGACCGACACG
TGCTCGATCAACGAAAACTCATCAAAGTTTACGGGACCGAAACATTTCCA
TTGAAGTTGTGCATACAGTAAAACCACAGCGAAGCATCAAACAACCTCAC
CGTGCTCGTGGTCAAAGTACGCTTCCCAAATTTGCAAGAATTGGAGACAG
ACTCCACAGCGTTCTGGTGgttaaagattttcaagaaaCGACGTCGAACA
GTGAAACGACCGACACGTGCTCGATCAACGAAAACTCATCAAAGTTTACG
GGACCGAAACATTTCCATTGAAGTTGTGCATACAGTAAAACCACAGCGAA
GCATCAAACAACCTCACCGTGCTCGTGGTCAAAGTACGCTTCCCAAATTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000506_pilon | genome | sc0000506_pilon:117366..119775 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 835-1050:2195 |
| Aaloc | 676-831:1564 |
| Aaloc | 322-672:987 |
| Aaloc | 214-318:683 |
| Aaloc | 1-210:1 |
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