XLOC_035106 (mRNA) -

Overview
NameXLOC_035106
Unique NameXLOC_035106
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000055_pilon:1812282..1813532-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035106 ID=XLOC_035106|Name=XLOC_035106|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1251bp|location=Sequence derived from alignment at sc0000055_pilon:1812282..1813532- (Clytia hemisphaerica_ch_hm2_pilon)
ATCGATAAACTTTTAACTTTTGATGGTTTTGAGAGAAAAGATAAATCTTC GTTTTTGTTTCTCATTGCAATTGGTGGTGATGAAGCCCCTGAGGCAGGAA CAGCTTTTCTTTTATCTTTTCTCAATGTTGGAAAGAGAATTGCCAGCAGT TTTGAAAATTTCTTAGTTTTTGGTGCACATGTGAAGGAGAGTGGTATCGT TGTCCAGCGTTATTTGAGAAAACTCTTAAGTGACTTGGTGTTCCTTGAAA GTAATGTTTTTGATGTGTTTATTAATGATGAGCTTTTCAAGGTAGAGTTC AAAGTACAGGCTATTCCAAACGACATGAAAATGCTAGCTTTCATTGCCGG AGAACTTAACAACAAAGCAACTTATTTCACTACATTTGCAAATGTTTGTG GTGCGGAAAGTAATGATATTACTAAAAGATTCTCGATGACTGATGATAAT GCTGAATGGAAACCCTTTTCTTACGAAAAACGTGTGAACGATGCCAAAAA AGTGTCCATAAAAAAACAGGAATTGCACAAGAAAAACACCACCAAGTCGA GAACTCCATTAACAACTTACATTGCTGGCTTGAAGAGCCGACAAGAGTTT GCGCCGCGTTTAGGAAAGTTTGTTGATCTTGCCCGTTGTGAACCCTTACA TCTTAAAAATAACTGTTGCAAAGAAATTTTCATGAAAATTCTCTTAAGTA TTGTTCTAGTTGAAGCAAAATTGCCATCATCAGTCAAAGAGTTCAAGGAT ATCAAGGATGATAACATTTTTAAAATTTTCATCAGTTTTGTCAAAACTGA TATGAATTGCAACTATCTTGCTAAGAAACTGATTTCATGGTTTAATGACA ACAAAGAAAAGCAAAAGGAAAGAGATTTTGGTTTTCGGTTTCGTGGTAAA GAAAGTGGAAATTTCTTAAAATTTTTTCCAAAGATGGTTGAACTCCTTCA ATCGCTAATATCATCAGATCGCCTCGAAAAATTGTTCATTTATTTTTATC AGGCTTTTCATCTTCGAAAAATGGTCTCATACTCAGTGCGTATACAAAAT TTAACCGATGTTGATGTTGATGATGTTTTAATCACTGGACGATCCTTGTT TTTAAGTTGTGCATTATTTGATTCAAAACTTACACCGAGCATGTGGTGTT TTGCTGTAGTTGCTCCAGCTCATATAGCTGATTGTATGAAAAAGTTGAAA CTTGGACTAGGTGTTATGACAATGGAGGGTAGAGAGCAGAAGCATCAAAA G

Coding sequence (CDS) from alignment at sc0000055_pilon:1812282..1813532-

>XLOC_035106 ID=XLOC_035106|Name=XLOC_035106|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2502bp|location=Sequence derived from alignment at sc0000055_pilon:1812282..1813532- (Clytia hemisphaerica_ch_hm2_pilon)
ATCGATAAACTTTTAACTTTTGATGGTTTTGAGAGAAAAGATAAATCTTC
GTTTTTGTTTCTCATTGCAATTGGTGGTGATGAAGCCCCTGAGGCAGGAA
CAGCTTTTCTTTTATCTTTTCTCAATGTTGGAAAGAGAATTGCCAGCAGT
TTTGAAAATTTCTTAGTTTTTGGTGCACATGTGAAGGAGAGTGGTATCGT
TGTCCAGCGTTATTTGAGAAAACTCTTAAGTGACTTGGTGTTCCTTGAAA
GTAATGTTTTTGATGTGTTTATTAATGATGAGCTTTTCAAGGTAGAGTTC
AAAGTACAGGCTATTCCAAACGACATGAAAATGCTAGCTTTCATTGCCGG
AGAACTTAACAACAAAGCAACTTATTTCACTACATTTGCAAATGTTTGTG
GTGCGGAAAGTAATGATATTACTAAAAGATTCTCGATGACTGATGATAAT
GCTGAATGGAAACCCTTTTCTTACGAAAAACGTGTGAACGATGCCAAAAA
AGTGTCCATAAAAAAACAGGAATTGCACAAGAAAAACACCACCAAGTCGA
GAACTCCATTAACAACTTACATTGCTGGCTTGAAGAGCCGACAAGAGTTT
GCGCCGCGTTTAGGAAAGTTTGTTGATCTTGCCCGTTGTGAACCCTTACA
TCTTAAAAATAACTGTTGCAAAGAAATTTTCATGAAAATTCTCTTAAGTA
TTGTTCTAGTTGAAGCAAAATTGCCATCATCAGTCAAAGAGTTCAAGGAT
ATCAAGGATGATAACATTTTTAAAATTTTCATCAGTTTTGTCAAAACTGA
TATGAATTGCAACTATCTTGCTAAGAAACTGATTTCATGGTTTAATGACA
ACAAAGAAAAGCAAAAGGAAAGAGATTTTGGTTTTCGGTTTCGTGGTAAA
GAAAGTGGAAATTTCTTAAAATTTTTTCCAAAGATGGTTGAACTCCTTCA
ATCGCTAATATCATCAGATCGCCTCGAAAAATTGTTCATTTATTTTTATC
AGGCTTTTCATCTTCGAAAAATGGTCTCATACTCAGTGCGTATACAAAAT
TTAACCGATGTTGATGTTGATGATGTTTTAATCACTGGACGATCCTTGTT
TTTAAGTTGTGCATTATTTGATTCAAAACTTACACCGAGCATGTGGTGTT
TTGCTGTAGTTGCTCCAGCTCATATAGCTGATTGTATGAAAAAGTTGAAA
CTTGGACTAGGTGTTATGACAATGGAGGGTAGAGAGCAGAAGCATCAAAA
GATCGATAAACTTTTAACTTTTGATGGTTTTGAGAGAAAAGATAAATCTT
CGTTTTTGTTTCTCATTGCAATTGGTGGTGATGAAGCCCCTGAGGCAGGA
ACAGCTTTTCTTTTATCTTTTCTCAATGTTGGAAAGAGAATTGCCAGCAG
TTTTGAAAATTTCTTAGTTTTTGGTGCACATGTGAAGGAGAGTGGTATCG
TTGTCCAGCGTTATTTGAGAAAACTCTTAAGTGACTTGGTGTTCCTTGAA
AGTAATGTTTTTGATGTGTTTATTAATGATGAGCTTTTCAAGGTAGAGTT
CAAAGTACAGGCTATTCCAAACGACATGAAAATGCTAGCTTTCATTGCCG
GAGAACTTAACAACAAAGCAACTTATTTCACTACATTTGCAAATGTTTGT
GGTGCGGAAAGTAATGATATTACTAAAAGATTCTCGATGACTGATGATAA
TGCTGAATGGAAACCCTTTTCTTACGAAAAACGTGTGAACGATGCCAAAA
AAGTGTCCATAAAAAAACAGGAATTGCACAAGAAAAACACCACCAAGTCG
AGAACTCCATTAACAACTTACATTGCTGGCTTGAAGAGCCGACAAGAGTT
TGCGCCGCGTTTAGGAAAGTTTGTTGATCTTGCCCGTTGTGAACCCTTAC
ATCTTAAAAATAACTGTTGCAAAGAAATTTTCATGAAAATTCTCTTAAGT
ATTGTTCTAGTTGAAGCAAAATTGCCATCATCAGTCAAAGAGTTCAAGGA
TATCAAGGATGATAACATTTTTAAAATTTTCATCAGTTTTGTCAAAACTG
ATATGAATTGCAACTATCTTGCTAAGAAACTGATTTCATGGTTTAATGAC
AACAAAGAAAAGCAAAAGGAAAGAGATTTTGGTTTTCGGTTTCGTGGTAA
AGAAAGTGGAAATTTCTTAAAATTTTTTCCAAAGATGGTTGAACTCCTTC
AATCGCTAATATCATCAGATCGCCTCGAAAAATTGTTCATTTATTTTTAT
CAGGCTTTTCATCTTCGAAAAATGGTCTCATACTCAGTGCGTATACAAAA
TTTAACCGATGTTGATGTTGATGATGTTTTAATCACTGGACGATCCTTGT
TTTTAAGTTGTGCATTATTTGATTCAAAACTTACACCGAGCATGTGGTGT
TTTGCTGTAGTTGCTCCAGCTCATATAGCTGATTGTATGAAAAAGTTGAA
ACTTGGACTAGGTGTTATGACAATGGAGGGTAGAGAGCAGAAGCATCAAA
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035106XLOC_035106-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000055_pilongenomesc0000055_pilon:1812282..1813532 -
Properties
Property NameValue
Aaloc1-1251:1252