|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000177_pilon:453089..455272+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035054 ID=XLOC_035054|Name=XLOC_035054|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2184bp|location=Sequence derived from alignment at sc0000177_pilon:453089..455272+ (Clytia hemisphaerica_ch_hm2_pilon)
GACAACAATAACATTCCATTGAACAATCAGAATGATCATGAGATGAATGA
GGAACCACGTGTGAACGAAACAAATATTCAATTGAGTGACCATCATCATG
GGCACCTTAACATCCATGAAAATAGATTTGTAAAAGAAGCTGTATCAAAC
TTCATCAAAGGGGAAGATAAGCATTCTATAGATAGATGTATCACATGCCA
AGAAGTCAGGCCAGTATTCTTTTCCCATGTCCCTAAGAAGAAGGCGGATA
AGTGGCAAGTAGAAGATCAAAGATGCACTAGGTGTAAAGATGAATTTAAT
CAgaaacaaaatcgaaaaaaaaatcatgcgCTACTTTTTTCAGGGATTCA
TTCACCTCCCACTGATTGCTTCTGTGACAATGAGGGAAATCTGTTGCATA
ATAATCAACACTTTGCCAACACACCCTCTTTTCTCCAAGGCCTTACTTTT
GTCGAAACATTGTTAATTCGCAAAATATCCATTGCAATCTATGTTCATTG
TTTAAAGTACGGAATGTTGGCCTCAAAGGGCCATGCAGTTGCCATacctt
caaatttaaaaatattcaccAAATTGCCTCAATTACCATCTGAAATTGGC
ATCATCTTGATAAGAAGTGGTAGCAATAATTCAAAAGCTTACATGGCCTC
CCGACACAGGGTACAAAAAGCTCTTAATGGTTTGGTTTTTGGTATCCCTG
CTTTTGGACTGGATAATCCACAACCTGGATATTCTCAATATAAaggaaaa
aatcacatttctgggaaaattttaaaagggaaatattttttgcatgaGCC
CAATCCATATTATCATGATGTAATTATTGAGCAGAATCGCCTCTTAAACA
TTCCTGAAGATGCTGGAATTATACCagggcttccaatagtttctgCTGAT
AAGttcaataatgaaaataaaaatgaagataaaggCCCAGCACCTGGTCA
GTTTGAAAAGCTTGCCGTAGATGAAGAATTAACAACAGCATCAGGGTTTG
CAACTCAATTAACAAATTCTGATGCTgatgaaaatgttaagaatgcATTG
CGTGCATTTCTGGGTGACAATGCTAATGTTGAAGAAATTCTTGAAGCAGG
TCAAGTAGCAGACATAGGAAGGCTGCACCTAAACAAAAGAGAGAAACCTA
TTCCAGAATTATCAACCGATGGTTTTTTCACAATGTGTTATCCTCATATT
TTTGTAAATGGGACATGTGATTATACTATTAAAGCTGCAAGAACTTTGAA
ATATGAAGACTGGGTACAGCACATATGCTATTGCAATGATAACAGAGTGC
CTGCTCacagatttctcaaatttcaccTAATGAATATCAGTATGCGTAAA
AAAGCTTTGGATCAAGGTTCCTTTTGTGTCAACCAACAGATCAATGAGAA
ACATATCACCAGGGATGAGTTACTTGAACAGTtagaaaatcaagatgaag
CAATACCGCGCAAATTTTTATCATTCAGTGCTAACTTAATTGATACAGCT
CCGTATTGGCGTGAACGAAAGCATGAATTGGattccttttgttttttcat
GTTGAAAGAACACCAAGTTTATCCTACCTATTTTGATACTTCCAGCTGTG
CAGAGCATCACTGGATTCCACTGCATAACATTTTGATAAAGTACCTGTCT
CAAATTACTGGAGATCTTGAAGCTGATCTCcaagtaaaattcaaaagtga
ctCAAAGTTTCGACATCAAGTCTTACTTCAAAACCAGCATATTGTTACAT
CATATTTTGATGCAAGACATCACAATTACATAAATACAGTATTAAAAGAG
CTTTTTCAGTATGAAGAATTTTGGAGTCGATATGAATTCGCCAAATCAAG
AGGGCAGATTCATTCACACtccttatttttttctaaacaacaCTATGATA
AAGTCAAAGCTATATTATCTCAAGATAAAAATGACCCAACTGTAAATATT
GCCAAAGATCTTGAAACATGGCTTCAAACAAATGAGATGAATGACACTGG
GGTTTTTTCTCCTGGGTTTGTATCCTTACACCCTGCAGGAGGTGAAGTGC
AACACAATGATGATCAAACACCACAATGGGTTCCTAACAAACAAAATTGG
CCTTTGCCAGAAGGAAGTTTAACTGATGTAGATGCCAATGTGTTGAAAAA
TGTGTCTTATGTCAAGGAGATGATGAAGAATTAA Coding sequence (CDS) from alignment at sc0000177_pilon:453089..455272+ >XLOC_035054 ID=XLOC_035054|Name=XLOC_035054|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4368bp|location=Sequence derived from alignment at sc0000177_pilon:453089..455272+ (Clytia hemisphaerica_ch_hm2_pilon)
GACAACAATAACATTCCATTGAACAATCAGAATGATCATGAGATGAATGA
GGAACCACGTGTGAACGAAACAAATATTCAATTGAGTGACCATCATCATG
GGCACCTTAACATCCATGAAAATAGATTTGTAAAAGAAGCTGTATCAAAC
TTCATCAAAGGGGAAGATAAGCATTCTATAGATAGATGTATCACATGCCA
AGAAGTCAGGCCAGTATTCTTTTCCCATGTCCCTAAGAAGAAGGCGGATA
AGTGGCAAGTAGAAGATCAAAGATGCACTAGGTGTAAAGATGAATTTAAT
CAgaaacaaaatcgaaaaaaaaatcatgcgCTACTTTTTTCAGGGATTCA
TTCACCTCCCACTGATTGCTTCTGTGACAATGAGGGAAATCTGTTGCATA
ATAATCAACACTTTGCCAACACACCCTCTTTTCTCCAAGGCCTTACTTTT
GTCGAAACATTGTTAATTCGCAAAATATCCATTGCAATCTATGTTCATTG
TTTAAAGTACGGAATGTTGGCCTCAAAGGGCCATGCAGTTGCCATacctt
caaatttaaaaatattcaccAAATTGCCTCAATTACCATCTGAAATTGGC
ATCATCTTGATAAGAAGTGGTAGCAATAATTCAAAAGCTTACATGGCCTC
CCGACACAGGGTACAAAAAGCTCTTAATGGTTTGGTTTTTGGTATCCCTG
CTTTTGGACTGGATAATCCACAACCTGGATATTCTCAATATAAaggaaaa
aatcacatttctgggaaaattttaaaagggaaatattttttgcatgaGCC
CAATCCATATTATCATGATGTAATTATTGAGCAGAATCGCCTCTTAAACA
TTCCTGAAGATGCTGGAATTATACCagggcttccaatagtttctgCTGAT
AAGttcaataatgaaaataaaaatgaagataaaggCCCAGCACCTGGTCA
GTTTGAAAAGCTTGCCGTAGATGAAGAATTAACAACAGCATCAGGGTTTG
CAACTCAATTAACAAATTCTGATGCTgatgaaaatgttaagaatgcATTG
CGTGCATTTCTGGGTGACAATGCTAATGTTGAAGAAATTCTTGAAGCAGG
TCAAGTAGCAGACATAGGAAGGCTGCACCTAAACAAAAGAGAGAAACCTA
TTCCAGAATTATCAACCGATGGTTTTTTCACAATGTGTTATCCTCATATT
TTTGTAAATGGGACATGTGATTATACTATTAAAGCTGCAAGAACTTTGAA
ATATGAAGACTGGGTACAGCACATATGCTATTGCAATGATAACAGAGTGC
CTGCTCacagatttctcaaatttcaccTAATGAATATCAGTATGCGTAAA
AAAGCTTTGGATCAAGGTTCCTTTTGTGTCAACCAACAGATCAATGAGAA
ACATATCACCAGGGATGAGTTACTTGAACAGTtagaaaatcaagatgaag
CAATACCGCGCAAATTTTTATCATTCAGTGCTAACTTAATTGATACAGCT
CCGTATTGGCGTGAACGAAAGCATGAATTGGattccttttgttttttcat
GTTGAAAGAACACCAAGTTTATCCTACCTATTTTGATACTTCCAGCTGTG
CAGAGCATCACTGGATTCCACTGCATAACATTTTGATAAAGTACCTGTCT
CAAATTACTGGAGATCTTGAAGCTGATCTCcaagtaaaattcaaaagtga
ctCAAAGTTTCGACATCAAGTCTTACTTCAAAACCAGCATATTGTTACAT
CATATTTTGATGCAAGACATCACAATTACATAAATACAGTATTAAAAGAG
CTTTTTCAGTATGAAGAATTTTGGAGTCGATATGAATTCGCCAAATCAAG
AGGGCAGATTCATTCACACtccttatttttttctaaacaacaCTATGATA
AAGTCAAAGCTATATTATCTCAAGATAAAAATGACCCAACTGTAAATATT
GCCAAAGATCTTGAAACATGGCTTCAAACAAATGAGATGAATGACACTGG
GGTTTTTTCTCCTGGGTTTGTATCCTTACACCCTGCAGGAGGTGAAGTGC
AACACAATGATGATCAAACACCACAATGGGTTCCTAACAAACAAAATTGG
CCTTTGCCAGAAGGAAGTTTAACTGATGTAGATGCCAATGTGTTGAAAAA
TGTGTCTTATGTCAAGGAGATGATGAAGAATTAAGACAACAATAACATTC
CATTGAACAATCAGAATGATCATGAGATGAATGAGGAACCACGTGTGAAC
GAAACAAATATTCAATTGAGTGACCATCATCATGGGCACCTTAACATCCA
TGAAAATAGATTTGTAAAAGAAGCTGTATCAAACTTCATCAAAGGGGAAG
ATAAGCATTCTATAGATAGATGTATCACATGCCAAGAAGTCAGGCCAGTA
TTCTTTTCCCATGTCCCTAAGAAGAAGGCGGATAAGTGGCAAGTAGAAGA
TCAAAGATGCACTAGGTGTAAAGATGAATTTAATCAgaaacaaaatcgaa
aaaaaaatcatgcgCTACTTTTTTCAGGGATTCATTCACCTCCCACTGAT
TGCTTCTGTGACAATGAGGGAAATCTGTTGCATAATAATCAACACTTTGC
CAACACACCCTCTTTTCTCCAAGGCCTTACTTTTGTCGAAACATTGTTAA
TTCGCAAAATATCCATTGCAATCTATGTTCATTGTTTAAAGTACGGAATG
TTGGCCTCAAAGGGCCATGCAGTTGCCATaccttcaaatttaaaaatatt
caccAAATTGCCTCAATTACCATCTGAAATTGGCATCATCTTGATAAGAA
GTGGTAGCAATAATTCAAAAGCTTACATGGCCTCCCGACACAGGGTACAA
AAAGCTCTTAATGGTTTGGTTTTTGGTATCCCTGCTTTTGGACTGGATAA
TCCACAACCTGGATATTCTCAATATAAaggaaaaaatcacatttctggga
aaattttaaaagggaaatattttttgcatgaGCCCAATCCATATTATCAT
GATGTAATTATTGAGCAGAATCGCCTCTTAAACATTCCTGAAGATGCTGG
AATTATACCagggcttccaatagtttctgCTGATAAGttcaataatgaaa
ataaaaatgaagataaaggCCCAGCACCTGGTCAGTTTGAAAAGCTTGCC
GTAGATGAAGAATTAACAACAGCATCAGGGTTTGCAACTCAATTAACAAA
TTCTGATGCTgatgaaaatgttaagaatgcATTGCGTGCATTTCTGGGTG
ACAATGCTAATGTTGAAGAAATTCTTGAAGCAGGTCAAGTAGCAGACATA
GGAAGGCTGCACCTAAACAAAAGAGAGAAACCTATTCCAGAATTATCAAC
CGATGGTTTTTTCACAATGTGTTATCCTCATATTTTTGTAAATGGGACAT
GTGATTATACTATTAAAGCTGCAAGAACTTTGAAATATGAAGACTGGGTA
CAGCACATATGCTATTGCAATGATAACAGAGTGCCTGCTCacagatttct
caaatttcaccTAATGAATATCAGTATGCGTAAAAAAGCTTTGGATCAAG
GTTCCTTTTGTGTCAACCAACAGATCAATGAGAAACATATCACCAGGGAT
GAGTTACTTGAACAGTtagaaaatcaagatgaagCAATACCGCGCAAATT
TTTATCATTCAGTGCTAACTTAATTGATACAGCTCCGTATTGGCGTGAAC
GAAAGCATGAATTGGattccttttgttttttcatGTTGAAAGAACACCAA
GTTTATCCTACCTATTTTGATACTTCCAGCTGTGCAGAGCATCACTGGAT
TCCACTGCATAACATTTTGATAAAGTACCTGTCTCAAATTACTGGAGATC
TTGAAGCTGATCTCcaagtaaaattcaaaagtgactCAAAGTTTCGACAT
CAAGTCTTACTTCAAAACCAGCATATTGTTACATCATATTTTGATGCAAG
ACATCACAATTACATAAATACAGTATTAAAAGAGCTTTTTCAGTATGAAG
AATTTTGGAGTCGATATGAATTCGCCAAATCAAGAGGGCAGATTCATTCA
CACtccttatttttttctaaacaacaCTATGATAAAGTCAAAGCTATATT
ATCTCAAGATAAAAATGACCCAACTGTAAATATTGCCAAAGATCTTGAAA
CATGGCTTCAAACAAATGAGATGAATGACACTGGGGTTTTTTCTCCTGGG
TTTGTATCCTTACACCCTGCAGGAGGTGAAGTGCAACACAATGATGATCA
AACACCACAATGGGTTCCTAACAAACAAAATTGGCCTTTGCCAGAAGGAA
GTTTAACTGATGTAGATGCCAATGTGTTGAAAAATGTGTCTTATGTCAAG
GAGATGATGAAGAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000177_pilon | genome | sc0000177_pilon:453089..455272 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2137-2172:2149 |
| Aaloc | 1-2136:1 |
|
