XLOC_035039 (mRNA) -

Overview
NameXLOC_035039
Unique NameXLOC_035039
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000293_pilon:430848..431756+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035039 ID=XLOC_035039|Name=XLOC_035039|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=909bp|location=Sequence derived from alignment at sc0000293_pilon:430848..431756+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCACGAAAATATTGAATCCATTTGCTtcaaatttgaagaagaaattga gAATGTAAACAATATTGAGAATAGAAATATCGCTGGGAATGAGTTGGACA CCGTGAAAGTCAAAATCGAGGAGAAGGATTATGATTTTGTTAGTATTGAT GGTAATGCTACGACAGCAAGTCTGCAAATTGATTCGTCCATTGAtatcaa aattgaatttgatgaaatttcaacctttgCTGCAGAAGAATCGTCAAATA CTGATTATTTAACCCAAATCGCGAGTTCGATTGTGGAAAGTGAAAAGGAA CGAATAAAAGAAGGCGATAATTCcaataattattttgagtgtAATGACTG TGGTGCTTGTTATACATCAAAGGAGTTCCTTGATCAacatttcgttcaaa aacaCCGTCTAATTAATAATCTAAATTGTGCTGTTTGTGGTAAACACTTT ACGCAAAAATATAACTTGAATGTCCATTTAAGAACTCACACAGGAGAAAG ACCTTTTCaatgtgaagaatgtggtaaatcctTTACTTACAAATCGTGCT TGAACATTCACTTGAGGTCTCATACAGGAAAGgatcaagaatgtggtaaa caATTTACCGAAAGTAGAGCAGCAAATGGGATGAGCCGAACCAATGATTC ACcaagcaaatattttaaatgtaaTAAATGTGGCGTATGTTATACTACAA AAGAGTTCCTTGAAAAGCATTTCTTACAAAAACATAGTAATAACACAAAG TTTCAGTGTAAAGAATGTGGTAGATCATTTACACAAAAATATAACCTGGC TACTCATTTAAAAACTCACAAACGAGAAAAGGTATTTGTATTCAAAGATT GCAGTGAAAAATTTGCCACAAAAAGTCAGAAGGTACACAAAAGAATCAAA TCATGTTAG

Coding sequence (CDS) from alignment at sc0000293_pilon:430848..431756+

>XLOC_035039 ID=XLOC_035039|Name=XLOC_035039|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1818bp|location=Sequence derived from alignment at sc0000293_pilon:430848..431756+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCACGAAAATATTGAATCCATTTGCTtcaaatttgaagaagaaattga
gAATGTAAACAATATTGAGAATAGAAATATCGCTGGGAATGAGTTGGACA
CCGTGAAAGTCAAAATCGAGGAGAAGGATTATGATTTTGTTAGTATTGAT
GGTAATGCTACGACAGCAAGTCTGCAAATTGATTCGTCCATTGAtatcaa
aattgaatttgatgaaatttcaacctttgCTGCAGAAGAATCGTCAAATA
CTGATTATTTAACCCAAATCGCGAGTTCGATTGTGGAAAGTGAAAAGGAA
CGAATAAAAGAAGGCGATAATTCcaataattattttgagtgtAATGACTG
TGGTGCTTGTTATACATCAAAGGAGTTCCTTGATCAacatttcgttcaaa
aacaCCGTCTAATTAATAATCTAAATTGTGCTGTTTGTGGTAAACACTTT
ACGCAAAAATATAACTTGAATGTCCATTTAAGAACTCACACAGGAGAAAG
ACCTTTTCaatgtgaagaatgtggtaaatcctTTACTTACAAATCGTGCT
TGAACATTCACTTGAGGTCTCATACAGGAAAGgatcaagaatgtggtaaa
caATTTACCGAAAGTAGAGCAGCAAATGGGATGAGCCGAACCAATGATTC
ACcaagcaaatattttaaatgtaaTAAATGTGGCGTATGTTATACTACAA
AAGAGTTCCTTGAAAAGCATTTCTTACAAAAACATAGTAATAACACAAAG
TTTCAGTGTAAAGAATGTGGTAGATCATTTACACAAAAATATAACCTGGC
TACTCATTTAAAAACTCACAAACGAGAAAAGGTATTTGTATTCAAAGATT
GCAGTGAAAAATTTGCCACAAAAAGTCAGAAGGTACACAAAAGAATCAAA
TCATGTTAGTTTCACGAAAATATTGAATCCATTTGCTtcaaatttgaaga
agaaattgagAATGTAAACAATATTGAGAATAGAAATATCGCTGGGAATG
AGTTGGACACCGTGAAAGTCAAAATCGAGGAGAAGGATTATGATTTTGTT
AGTATTGATGGTAATGCTACGACAGCAAGTCTGCAAATTGATTCGTCCAT
TGAtatcaaaattgaatttgatgaaatttcaacctttgCTGCAGAAGAAT
CGTCAAATACTGATTATTTAACCCAAATCGCGAGTTCGATTGTGGAAAGT
GAAAAGGAACGAATAAAAGAAGGCGATAATTCcaataattattttgagtg
tAATGACTGTGGTGCTTGTTATACATCAAAGGAGTTCCTTGATCAacatt
tcgttcaaaaacaCCGTCTAATTAATAATCTAAATTGTGCTGTTTGTGGT
AAACACTTTACGCAAAAATATAACTTGAATGTCCATTTAAGAACTCACAC
AGGAGAAAGACCTTTTCaatgtgaagaatgtggtaaatcctTTACTTACA
AATCGTGCTTGAACATTCACTTGAGGTCTCATACAGGAAAGgatcaagaa
tgtggtaaacaATTTACCGAAAGTAGAGCAGCAAATGGGATGAGCCGAAC
CAATGATTCACcaagcaaatattttaaatgtaaTAAATGTGGCGTATGTT
ATACTACAAAAGAGTTCCTTGAAAAGCATTTCTTACAAAAACATAGTAAT
AACACAAAGTTTCAGTGTAAAGAATGTGGTAGATCATTTACACAAAAATA
TAACCTGGCTACTCATTTAAAAACTCACAAACGAGAAAAGGTATTTGTAT
TCAAAGATTGCAGTGAAAAATTTGCCACAAAAAGTCAGAAGGTACACAAA
AGAATCAAATCATGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035039XLOC_035039-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000293_pilongenomesc0000293_pilon:430848..431756 +
Properties
Property NameValue
Aaloc841-900:850
Aaloc817-840:820
Aaloc1-816:1