XLOC_035037 (mRNA) -

Overview
NameXLOC_035037
Unique NameXLOC_035037
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000019_pilon:1816342..1817626-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035037 ID=XLOC_035037|Name=XLOC_035037|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1285bp|location=Sequence derived from alignment at sc0000019_pilon:1816342..1817626- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGAGTTTGGGGAATATGATTCCGTGAAGGTAAGGGATAGGGTCTT GCTTTCATCCTTTTCGTTTTCACTTTCATGTCATCCTTGCATAATCAATT TTCTAATTTTATCTTGTCACTTCCGTTCTAGTTTTAAGTTTGTTTGTTTA TTTATTGATTTTTTTCATTTATTTATTTGTCATCTTTCGCAGCGAACTGG ATGAGACGGTGACTGAGTTGCTCAAAAAGAATAGCCCTTATTCCATGGCC AGTCATTTTAAATCTAAAATCGTGTTATTATTGTTATTACAGCAATACGT TACCCCTAAAGGACACAAGAAGCTGGAAACGACCTGTCCTTACCGAGATT GCCCTACGGGGTTCTATGGACCAAATATCGCTACCCACCTCACGAGCAAG CACCACTTGTGGGATAAGGAAATGGCTCAGATGGAGCAAAATTATCGCCA CAGGTACTTCATTTTAATTTAATCGAAAACAGACACCCGTGGTATCGAGG TAACTGTATTTTCTATTATTGACACCTCAGAAGTGAGCTCAGCCCTAATA TTTTTATTCATACAAAGAAAGAATGGAATCTCGATCTCCTTTGTAGGATA AATATTTCATACACTGTATAGGATCATTTTTTTTCAAGATATATTTCATT CTTTACACAGGATGTACAATTGGTGCACTCGATTAAAGGCCCATGATAGC ACAAGACCGAAGTTGTGCCGGGGTTGCAACAAGTTTTATGACCGTCTAGA TACTCATTTAAGAAGCAAACCACATAAAATCAAGGACGCAGCCCAGATTA ACATTGAAACCCAAGCCTGCCAACGTAAGATGAAAGATTTCCTCAACTTC CGTGATTCATTTCCAAGAATGAAACACAACACGTAAGTATATGAATTTCC TTCATTTTCTGTTTCGCAGAACTTGTAAATAAACTTTTAAGAGTGCAGAT GGGCTTGGTTTAGCTATAATTACTTTTTTTCTTTTTCCAATGGAAAGTAT TGAGTTAGTAACTGACTTAATATATTCATTGATCTTATTGCAAAGAAACA TATTTTGTTTTTTTAATCTTTATATAGGTTACCATCAACTTTATCTTCAT TCGAAACAAGTACGTCCAGGCGTAGTTCAATTTCAACGGCAAAAGAACAT ACGTCAAGTCCAAAGAAAAGAAAGACTGGGTATGTCATAATATTTTGCAC ATTAAAGCATCAAGTCTTATTTAGAACCTTTACTAAGGTTTCACTCTTTT CAAGTCATTCATTATTAAGTCCAATCCATCTTTGA

Coding sequence (CDS) from alignment at sc0000019_pilon:1816342..1817626-

>XLOC_035037 ID=XLOC_035037|Name=XLOC_035037|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1248bp|location=Sequence derived from alignment at sc0000019_pilon:1816342..1817626- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGAGTTTGGGGAATATGATTCCGTGAAGATGAAGGAGTTTGGGGA
ATATGATTCCGTGAAGCAATACGTTACCCCTAAAGGACACAAGAAGCTGG
AAACGACCTGTCCTTACCGAGATTGCCCTACGGGGTTCTATGGACCAAAT
ATCGCTACCCACCTCACGAGCAAGCACCACTTGTGGGATAAGGAAATGGC
TCAGATGGAGCAAAATTATCGCCACAGCAATACGTTACCCCTAAAGGACA
CAAGAAGCTGGAAACGACCTGTCCTTACCGAGATTGCCCTACGGGGTTCT
ATGGACCAAATATCGCTACCCACCTCACGAGCAAGCACCACTTGTGGGAT
AAGGAAATGGCTCAGATGGAGCAAAATTATCGCCACAGGATGTACAATTG
GTGCACTCGATTAAAGGCCCATGATAGCACAAGACCGAAGTTGTGCCGGG
GTTGCAACAAGTTTTATGACCGTCTAGATACTCATTTAAGAAGCAAACCA
CATAAAATCAAGGACGCAGCCCAGATTAACATTGAAACCCAAGCCTGCCA
ACGTAAGATGAAAGATTTCCTCAACTTCCGTGATTCATTTCCAAGAATGA
AACACAACACGATGTACAATTGGTGCACTCGATTAAAGGCCCATGATAGC
ACAAGACCGAAGTTGTGCCGGGGTTGCAACAAGTTTTATGACCGTCTAGA
TACTCATTTAAGAAGCAAACCACATAAAATCAAGGACGCAGCCCAGATTA
ACATTGAAACCCAAGCCTGCCAACGTAAGATGAAAGATTTCCTCAACTTC
CGTGATTCATTTCCAAGAATGAAACACAACACGTTACCATCAACTTTATC
TTCATTCGAAACAAGTACGTCCAGGCGTAGTTCAATTTCAACGGCAAAAG
AACATACGTCAAGTCCAAAGAAAAGAAAGACTGGGTATGTCATAATATTT
TGCACATTAAAGCATCAAGTCTTATTTAGAACCTTTACTAAGGTTTCACT
CTTTTCAAGTCATTCATTATTAAGTCCAATCCATCTTTGAGTTACCATCA
ACTTTATCTTCATTCGAAACAAGTACGTCCAGGCGTAGTTCAATTTCAAC
GGCAAAAGAACATACGTCAAGTCCAAAGAAAAGAAAGACTGGGTATGTCA
TAATATTTTGCACATTAAAGCATCAAGTCTTATTTAGAACCTTTACTAAG
GTTTCACTCTTTTCAAGTCATTCATTATTAAGTCCAATCCATCTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035037XLOC_035037-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019_pilongenomesc0000019_pilon:1816342..1817626 -
Properties
Property NameValue
Aaloc418-624:208
Aaloc196-414:625
Aaloc34-192:994
Aaloc1-33:1286