XLOC_035035 (mRNA) -

Overview
NameXLOC_035035
Unique NameXLOC_035035
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000293_pilon:426423..430155+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035035 ID=XLOC_035035|Name=XLOC_035035|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3733bp|location=Sequence derived from alignment at sc0000293_pilon:426423..430155+ (Clytia hemisphaerica_ch_hm2_pilon)
ATggagattgaaaatgaagtcaCAGACTGTAACATGGAAAGTAATTTTAG
TTTTACATGGAATGAACCAATCAATGGGAGAGaacttgattttgaagacc
agaCTTTGGATTTCAATGATCTTGTTAGGACCACTTTGGATATGGAAAAA
ACAGATATGACCAGTCTGCAGATTGATTTGGTCCCTGATTTAATTTCTAA
AGATAATGAAGTTTTAACCATGGAAACCTCCGATAATCTGTCAATATCTA
CGGAAGAAGACTTGTCAAATActgaaaatttaatggaaatGGCAAGTTCA
ATTGTTATAGATGAAGAagaaaggaaaaatgaaaattatttcaaatgcaT
AAAGTGTAGTTTCTGTTTCGACAAAAAGGAGTTCCTTAATGAGCATATAC
AAAAAGTACATGGTGAAGTCATGGGTTTTCaatgtgaagaatgtggtaag
CAGTTTACTCAAAATAGCAACTTGAAAGCACATTTGAGAACTCATTTAGG
TGGAAAGCCTTTTAAgtgtgaagaatgtggtaaacTCTTTACCCaaaaaa
aGAACTTGACAGAACATTTCAAAACTCATACTGGAGAAAAACCTTTCAAG
TGTGAAGAATGTGGTATACACTTCACACAAAAAGGCAGTTTGGCTGTCCA
TTTGAGAATCCATGcatgtgaaaataattttaaatgtgaagaatgtggta
aaaaCTTTACACAAAAAGGCAGCCTGAAAAGACATTTGAGAACTCacaca
ggagaaaaaaattttgaatgccAAGAGTGTGGTAAATGCTTTATGCAAAA
GGGTACCTTGAAAAGACATTTGAGAACTCACACAGgagaaaaacaatttg
aatgTCAATAGTGTGGTAAATGCTTTATGCAAAAGGGTACCTTGAAAACT
TATACGAGAACTCATGATGGAGGAAAAATGTGGTAAAACGTTTAGATGCA
AAAAACATCTCTCAAGACATCACAATTGAATTCACAAAAAGGAATAAAAC
TTACTTATGCAGATTTATATGATATACCCATTTATGAATTTAGTTTATAA
CTTTTAACCTGTGtttgtctgttcgtccgttctgttaccaacttttctcg
gggtTGAATcataggaaaattttgtgatttttgatacaaaggtcatggct
ggaaccccccctggcctgaggggggggggctaaaaggtcgagcagcgatt
ggtacctgattttagcctgtggctaggggggactaaccatgttaaggggt
cacctaaattttttcagaacgacctgggggctagattctatgtttggtga
ttgaatagacgatatcggctttccaaattctccccgaatgattacccatg
atgcgttgtgcaaaaaaattaacGGACGATATTGATGACGATaccaatgc
atcatgggtaatcattcggggagaattcggaaagctgatatcgtctatta
taagcagcctaccagaccataggttggcactttctcatcttatagtttaa
tctaagcaatgctcaaaaactgacaatttggtatctaatatattatctgc
agtgccgtagcatgggggggggggtcaaggggggCTATaaccccaataat
tttttcaaaaatggttattttgcaaagtttttctttttaaatttgtcata
attgtcttataagtgcatgctttgagtgcattttcaagcaatctagagat
caaattttcaaaatttttcccctcggaccaaaccatggttggccctcgcg
gtgtcactaaacttcagctcccctaatatgaaaatgcttcctacggaact
gatctgtaaaaattctttaatcatgTTGTATTTACTTAGATAAGAATCTG
TCTGGCAAGGGATCTGCATTctgacttacaaaaccttgataatctggCAT
GAACCTTCCGTAGTCAGCTTATCTCTAATTTCTTAccttagggcatttat
tctatttagcaataacctaaactaactgttgtatttgtttgatggtttga
gaaggattttcgaaaaaaaattgacttgccattggcttaggggtcgccaa
aaatatttggcaaccaggggttacctaaatcttaggggtcacctgaattc
ttagagggcacctaaaacctgctgccaagccatgaaggtgcaaaatggtt
attaccaaaatgtgacgaagtctgattttagaaaaaaaaaatttgggcca
attttggcccaaaaaatgcccaaaaatatttgttcattagtttttcctag
tTTTTTGTACAATGACGTAAAATTAAATTGTGCTAATTATGGGaaagtta
atttttcgaaaaaaattttgggcccaacttgcaaaattttaaatcattCA
GTTTTTGTTTCTGCATCTGCGTTTCttcaataaacttttattattcgttt
tataaacaggtaggtccataaaagtatagcttgtttaattttattgtgta
aaacttttctttttagaaaaatttaaaacaaacaaatgagAACCTTTTAT
TGATATGGAACAAATAATTAAAGTTGAACAAGAAGAACGAATATTATGTT
TTCACGAAAATATTGAATCCATTTGCTtcaaatttgaagaagaaattgag
AATGTAAACAATATTGAGAATAGAAATATCGCTGGGAATGAGTTAGACAC
CGTGAAAGTCAAAATCGAGGAGAAGGATAATGATTTTGTTAGTATTGATG
GTAATGCTACGACAGCAAGTCTGCAAATTGATTCGTGCATTGAtatcaaa
attgaatttgatgaaatttcaacctttgCTGCAGAAGAATCGTCAAATAC
TGATTATTTAACAGAAATCGAGAGTTCGATTGTGGAAAGCGAAAAGGAAC
GAATAAAAGAAGGTGCCGATAATTCcaataattattttgagtgtAATGAC
TGTGGTGCTTGTTATACATCAAAGGAGTTCCTTGGTCAacatttcgttca
aaaacaTCATGTAATTAATAATCTAAATTGTGCTGTTTGTGGTAAACACT
TTACGCAAAAATATAActtgaaagaacatttcaaaactCATACTGGAGAA
AAACCTTTTAAgtgtgaagaatgtggtaaacTCTTCACCCAAAAATATAA
cttgaaagaacatttcaaaactCATACTGGAGAAAAACCTTTCAAGTGTG
AAGAATGTGGTATACATTTCACACAAAAAGGCAACTTGAAAAAACATTTG
AGAACTCATACTGGAGAAAAACCTTTTAAgtgtgaagaatgtggtaagCA
GTTTACTCAAAATAGCAACTTGAAAACACATTTGAGAACTCATTCAGGTG
GAAAGCCTTTTAAgtgtgaagaatgtggtaaacTCTTCACCCAAAAATAT
AACTTGACAGAACATTTCAAAACTCATACTGGAGAAAAACCTTTCAagtg
tcaagaatgtggtataCACTTCACACAAAAAGGCAACTTGAAAAAACATT
TGAGAACTCATTCAGGTGGAAAACCTTTCAAgtgtgaagaatgtggtaaa
ctcttcacccaaaaaaagaacTTGACAGAACATTTCAAAACTCATACTGG
AGAAAAACCTTTTAAgtgtgaagaatgtggtaagCAGTTTACTCAAAATA
GCAACTTGAAAAAACATTTGAGAACTCACACAGgagaaaaacaatttgaa
tgTCAAGAGTGTGGTAAATGCTTTATGCAAAAGGGTACCTTGAAAAGACA
TTTGAGAACTCATACAGGAGAGAAACAATTTGA

Coding sequence (CDS) from alignment at sc0000293_pilon:426423..430155+

>XLOC_035035 ID=XLOC_035035|Name=XLOC_035035|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2036bp|location=Sequence derived from alignment at sc0000293_pilon:426423..430155+ (Clytia hemisphaerica_ch_hm2_pilon)
ATggagattgaaaatgaagtcaCAGACTGTAACATGGAAAGTAATTTTAG
TTTTACATGGAATGAACCAATCAATGGGAGAGaacttgattttgaagacc
agaCTTTGGATTTCAATGATCTTGTTAGGACCACTTTGGATATGGAAAAA
ACAGATATGACCAGTCTGCAGATTGATTTGGTCCCTGATTTAATTTCTAA
AGATAATGAAGTTTTAACCATGGAAACCTCCGATAATCTGTCAATATCTA
CGGAAGAAGACTTGTCAAATActgaaaatttaatggaaatGGCAAGTTCA
ATTGTTATAGATGAAGAagaaaggaaaaatgaaaattatttcaaatgcaT
AAAGTGTAGTTTCTGTTTCGACAAAAAGGAGTTCCTTAATGAGCATATAC
AAAAAGTACATGGTGAAGTCATGGGTTTTCaatgtgaagaatgtggtaag
CAGTTTACTCAAAATAGCAACTTGAAAGCACATTTGAGAACTCATTTAGG
TGGAAAGCCTTTTAAgtgtgaagaatgtggtaaacTCTTTACCCaaaaaa
aGAACTTGACAGAACATTTCAAAACTCATACTGGAGAAAAACCTTTCAAG
TGTGAAGAATGTGGTATACACTTCACACAAAAAGGCAGTTTGGCTGTCCA
TTTGAGAATCCATGcatgtgaaaataattttaaatgtgaagaatgtggta
aaaaCTTTACACAAAAAGGCAGCCTGAAAAGACATTTGAGAACTCacaca
ggagaaaaaaattttgaatgccAAGAGTGTGGTAAATGCTTTATGCAAAA
GGGTACCTTGAAAAGACATTTGAGAACTCACACAGgagaaaaacaatttg
aatgTCAATAGTGTGGTAAATGCTTTATGCAAAAGGGTACCTTGAAAACT
TATACGAGAACTCATGATATggagattgaaaatgaagtcaCAGACTGTAA
CATGGAAAGTAATTTTAGTTTTACATGGAATGAACCAATCAATGGGAGAG
aacttgattttgaagaccagaCTTTGGATTTCAATGATCTTGTTAGGACC
ACTTTGGATATGGAAAAAACAGATATGACCAGTCTGCAGATTGATTTGGT
CCCTGATTTAATTTCTAAAGATAATGAAGTTTTAACCATGGAAACCTCCG
ATAATCTGTCAATATCTACGGAAGAAGACTTGTCAAATActgaaaattta
atggaaatGGCAAGTTCAATTGTTATAGATGAAGAagaaaggaaaaatga
aaattatttcaaatgcaTAAAGTGTAGTTTCTGTTTCGACAAAAAGGAGT
TCCTTAATGAGCATATACAAAAAGTACATGGTGAAGTCATGGGTTTTCaa
tgtgaagaatgtggtaagCAGTTTACTCAAAATAGCAACTTGAAAGCACA
TTTGAGAACTCATTTAGGTGGAAAGCCTTTTAAgtgtgaagaatgtggta
aacTCTTTACCCaaaaaaaGAACTTGACAGAACATTTCAAAACTCATACT
GGAGAAAAACCTTTCAAGTGTGAAGAATGTGGTATACACTTCACACAAAA
AGGCAGTTTGGCTGTCCATTTGAGAATCCATGcatgtgaaaataatttta
aatgtgaagaatgtggtaaaaaCTTTACACAAAAAGGCAGCCTGAAAAGA
CATTTGAGAACTCacacaggagaaaaaaattttgaatgccAAGAGTGTGG
TAAATGCTTTATGCAAAAGGGTACCTTGAAAAGACATTTGAGAACTCACA
CAGgagaaaaacaatttgaatgTCAATAGTGTGGTAAATGCTTTATGCAA
AAGGGTACCTTGAAAACTTATACGAGAACTCATGATgagaaaaacaattt
gaatgTCAAGAGTGTGGTAAATGCTTTATGCAAAAGGGTACCTTGAAAAG
ACATTTGAGAACTCATACAGGAGAGAAACAATTTGAgagaaaaacaattt
gaatgTCAAGAGTGTGGTAAATGCTTTATGCAAAAGGGTACCTTGAAAAG
ACATTTGAGAACTCATACAGGAGAGAAACAATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035035XLOC_035035-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000293_pilongenomesc0000293_pilon:426423..430155 +
Properties
Property NameValue
Aaloc958-1017:3674
Aaloc919-957:3634
Aaloc1-918:1