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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000474_pilon:100647..104396- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035022 ID=XLOC_035022|Name=XLOC_035022|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3750bp|location=Sequence derived from alignment at sc0000474_pilon:100647..104396- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTCAAACTACCAAACACAATGAGGATGAGCAGTTGCTTACATAAATT
GAAAGAAGTTTTGGAAGGTGAAATCGAAAGTTCGCCCTGCTCCTTAAACT
TAGACGTTCGATCGAAAGGTATTACTTACCCTTTACTTAACATTCTTTTA
TAATTGTTCAATTGCAACAGTGTGCAAGTAAAATATGCTCATTTCAATTT
ATGACCGAAACATTTTTCATATTTTAATCTTCTATTTTTCAGGAAACGCC
TTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCAGGAAACCCAATC
AAATGGAGATGGCGAAAATAGACCAGATGACTCTCAGTCAACAACAAAAG
TTGAATTTCAGGTTAATGAGGTAATTTTGTTAATGAGTGTACTGTTTATA
ATTACAATCCGTGCCATAATATTTTTGCACTTTTGGCTAATTTACCATTT
TTCGAAAATTGAAGTTCGAGCGAGAATGTCAATTGTAGGCCCTCAACTTG
ATTTCATCGATTATTTCGATCTGGGAGGGATTTATTGGTTTCTAGGCTAT
ATTTCAAGCCATACTGGACCATTTTTAAACTTTTGGATCCTCAGATCCTA
AGGTCCTAAGTCTTAAGTCTAGCGTTAAAACTCAGAGTTAAAACTCTACC
CTTCGAACCTACTTTAGAGCACTTACAAATCGATTGTGGTTTCAAAACAC
CCCGGTGAATTTCCCTTTTGTGCCAAGTATTTTGTCCCTGATTGTCTTTG
AAAATTAAAAATGCCGATTTCTGCTCTGCAGGGGGTCTAAAATTAGGAGA
AAACCCCTTAAATGTGAAAAATAACCCTTTTCCTACCATTTTGAGGCATT
TTCATTAGGTCAGAATCAATTTTTTGTGAAATATTTTAACTTTTTGAAAA
GGTGCAATTTACGAAAAGTCAAAAAGGTGAAAATTTCAGAAAATTTTGAC
TTTTTTTCAAGTTTTAGCCCCTAAAATTGACGAAAGGGGGATTTTGAGCC
CGAAAAATTGCTTGAAACTTGAAATTAGACCCCCCGCTGAGCAGAATTTG
GCATTTTTCAGTTTCTGAGACAATCCGTGCCATAATATTTTTGCACTTTT
GGCTAATTTACCATTTTTCGAAAATTGAAGTTCGAGCGAGAATGTCAATT
GTAGGCCCTCAACTTGATTTCATCGATTATTTCGATCTGGGAGGGATTTA
TTGGTTTCTAGGCTATATTTCAAGCCATACTGGACCATTTTTAAACTTTT
GGATCCTCAGATCCTAAGGTCCTAAGTCTTAAGTCTAGCGTTAAAACTCA
GAGTTAAAACTCTACCCTTCGAACCTACTTTAGAGCACTTACAAATCGAT
TGTGGTTTCAAAACACCCCGGTGAATTTCCCTTTTGTGCCAAGTATTTTG
TCCCTGATTGTAGCTTACCATTCAAATTGAATAATGAAGCTATTTTCTCT
TTGTCAGAACCGATAATCTTTTTAGAAATTCTTTCTACAGATTTTTTGTT
AATTCTGTTTTTCCAGACTAGAACTGGTTAACTTTTTGTGTTGGGTATTA
CAACTTATTTTTGAAATTCCGTTCAAATGATCTGATTCGGATGTAATTTT
AACTTGTGAAATAAACGTGCTCTCCTTGGCAACATACCCCCCTCTTACAG
ACCTGCTAGCAGGATCTTTCAGGCAGTTGGGGTTTAAATAAAGGACCAGA
ATTCAATTGGGAAGATTGATATATCCCATGCTTTCGAGCCAGAAAACTCA
ATATGGATAGAAAAAATAGCACAATATATTTTAGAGTATAATTTTCCATT
GGGGACTATGTTTTCATCAATTATTTTTCAATATGAAGGGGTACTTGGTC
TGTCAGAACTGACTGATTGTCTTTGATTTCAATGCCTTGAAGAGGCTTGT
TCTGAAACTCCTGGTTGAGAAATTAAAAGCCACTTATTTTCCATTCAGAA
CACATGCCCGTGTGTTTTTAAAACAAAATTTAAAAGTGCACGGCAAACTT
AAGGCTTCACTTTTTCTTGCTTAAAAAAGGTAGAAGATTCTTCTCTAGCA
CCTTCGTACGATGGCTCAGAAGGCTCAAAACACGCACTTCTCGTTTTCTT
CCGAGTTTTTTTGTGACGATACTGCACACTTCTAAAAATATTTTAGAAAC
GCAAAAGTCCCCCTCGAAAGATAGCCGTTCTGGTCAGCAAAATATATACC
GAGTTGTAACAAATGAGTTGATGTTAATAGCGAAATCATTTGTGGTTTGA
CGAGTTGTAAATCTGGTTTGTGATTTATATATAACAACATTTTTTTGACG
CGTTAATCGGTCACTTTTTTGCTTCCCCGATTTAAGCCTAACAATACCCC
GATTTTTGCCACTGGGGGAAAACTTTTCCGACCAACACTTAACTCGGAAA
TTTTGATTCATTTTGCCTAACTCGACATTCATTTTAAATACCCAAAAAAA
ATTCATTGCGCGGGCCGCTCACTTGGGAATTTCCCACCGTGACAAGAAGT
CAGAATTGCGGAGTGTCACTGGGCAAAAGGAACGACGGGTATGTGCGGGT
ACTAAGGGTACCTTTTCCAATATGTTTAAAATGCACTGTAAGGGTCGGAA
AAACTAGAGATGCACTGTAAGGGTAGAAATTTCAGAAAAGTCTTGAAAAA
TCGAGATATTTTGACCAAACATGCTATAATTTGACCATTAAATTTGGGGG
AAAATGCACTCTTAGGGTATGATTTTCACTGATTTTAAATACCGTCAGTC
CGCAAACCCAGTGCCCCCCGGGCTTGAGCCTTTTGGGCCATTGACCCTAG
ACAGTTCTAGTTCACAAATTTTATAAGAACTAGAAGAAGGTCGTTAGGGA
TCATCGTACCTTCGGGGCTTCAACCTGAGTTCCACCACTTTACCGACTAC
AGAAGAAAAACAAGCAGTGATTTTTTAAATTCTTTTTTATTTAGTTTTTG
GACCTACCCCGGTTGGGTGGAGGTCCTATAAATTAACCTGTGCCCGTTCG
TCCGTTCGTTACCAACTTTTCTCAGGATTGAATCATAGGAATCTTTTGAT
TTTTGGTACAAAGGTGCAAAATAGTGGTGGCCAAAATGTGACGGAGCCCG
ATTTTCGAAAAAAGATATTTTTGGGCCAAAAAACGGGTTTTTTGGACTTT
GTGAAAAATTGGATCATTAATTTTTTCTGATTTTTTTGCATGAAAGTAGA
TAGAAGATCGCTCAAGTAGATTTTTGCAAAAAAAATTTGGTTGGCTCAAA
AAACGCATCTTTATCTATAAGAATCACTATTTATAAGCATAGAACAATGT
TCTTAGCCAAATTATTATTTTTATTATTACTTTTTCTAAAGAAAATGTCA
CGGTAGAGCGCGATGGTTTGAGTTTTCTGGAAACCTGTGCATTTTTCTGA
TAGTGGATTGTTTTTATAAAGAAAAGCGTTTAATAGCTTTTTTATTTATT
TCTCAAAAGTCTTTTTCAATAGTGTTGATAGTTTCTCCCAATAGATATGC
TTTCATTGTTCTTTATTTTTCTGTATTTTAACCAGTTATGTCTGATGTGT
TTCATTGTTTAAATGTTCATTGATTAGTTGGATAACCAGGTAGGTCCATA
AAAGTATCACTTGTTTTTTTTCCGATTAAACCTTACCTTTATGTTTTAAC
GAGAAATTTCAAATTACTTCCCATTTTTTAGCAAAAAGAAGATCGAGAAG
AAAGCGAATCATTTGACCCAACGAAGCTACGCGACCCCGAAAACGTTTTT
Coding sequence (CDS) from alignment at sc0000474_pilon:100647..104396- >XLOC_035022 ID=XLOC_035022|Name=XLOC_035022|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=630bp|location=Sequence derived from alignment at sc0000474_pilon:100647..104396- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTCAAACTACCAAACACAATGAGGATGAGCAGTTGCTTACATAAATT
GAAAGAAGTTTTGGAAGGTGAAATCGAAAGTTCGCCCTGCTCCTTAAACT
TAGACGTTCGATCGAAAGCTTTTCAAACTACCAAACACAATGAGGATGAG
CAGTTGCTTACATAAATTGAAAGAAGTTTTGGAAGGTGAAATCGAAAGTT
CGCCCTGCTCCTTAAACTTAGACGTTCGATCGAAAGGAAACGCCTTGCTA
ACAAAAGACGAATCTAACAAGGCCATAATCCAGGAAACCCAATCAAATGG
AGATGGCGAAAATAGACCAGATGACTCTCAGTCAACAACAAAAGTTGAAT
TTCAGGTTAATGAGGAAACGCCTTGCTAACAAAAGACGAATCTAACAAGG
CCATAATCCAGGAAACCCAATCAAATGGAGATGGCGAAAATAGACCAGAT
GACTCTCAGTCAACAACAAAAGTTGAATTTCAGGTTAATGAGCAAAAAGA
AGATCGAGAAGAAAGCGAATCATTTGACCCAACGAAGCTACGCGACCCCG
AAAACGTTTTTCAAAAAGAAGATCGAGAAGAAAGCGAATCATTTGACCCA
ACGAAGCTACGCGACCCCGAAAACGTTTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000474_pilon | genome | sc0000474_pilon:100647..104396 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 247-315:70 |
| Aaloc | 121-246:3507 |
| Aaloc | 1-117:3751 |
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