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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000230_pilon:474524..477232+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034989 ID=XLOC_034989|Name=XLOC_034989|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2709bp|location=Sequence derived from alignment at sc0000230_pilon:474524..477232+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGCACTTGAGTGGTCGGAATGCAGTGAAACACTTGATGATCTATT
GAAAAATCCTCGAGTACAACTTCCTCAACTTTTGAAACTCTCGTCTTCTT
TCAAAGACATTAACTCGAATGAAAGTCTACAGAAAGACCAGATAATTGTT
ATTCGCTCTAAAGAAACCATTGAGACTATTCACGGTGTTGATGCAGATGG
AAAAACGATTATAATCCCAATTGATTGTCCATTCAAAACGAGACGAAAAG
TTTCACCAGGAAAAGAGAAAGTTTTCGATTCAGTGACAGAGCTTGCTCAA
AGTGACCCTCTACCTCGCTTTGTAGAAGTGAAAGAGGCCCATGATGTTCA
AAATCTATCCAATGGAGATCGATTAAAAGTCGTTATCGTTGAAAAAGCTG
CCGGTGCCCCTTCAGTTTTGCATTGTCGTAGTTCTAGTGGAAAACATGTC
AAAATTTCTGTCAATGAGAACATTTCTTTTCAATCTTCAGTGAGTGATGG
TTCTGATCAAAGTATTGCGAAACTCTCAGAAAAATCAAGGGAGTTCCCAT
TTTGTGTTGAGTTTCTGAAACAGAAAGAAACCCCAGACATTCACACAAAG
CTTGGAATTTTCACCATTCAAGAATGTAAATCAGAAACTGTAGTTATTGC
ATCAGCAACTGTTAACTCAAAGGAAATAGCCATAGTATTTCCACTTCATT
CAGAGTTTAGCTTTCAAGTCACTTCAAAACTTAAGATGGCAAAGGATGAA
GCTTATCGTGAACTTTGTAATAATTCTTCATCTATCGACCCtgaaaaaat
tgttgaattcATAAATCACAAAAGCCCAAAAGACACTCAAATGCAATATG
TTTTGCCActtaaaaagcttcaaaaaatcttAGATTTTGACTACTCTCCG
GATACAGATCAACCTTCGCcaaaggaaaaacaaaagtCCAACGATAAACC
CAAGTCAgcaagaaaggagaaaaaagaatctcctaaaattgaaaaagaaa
acaaatccagaaaggacaaaccaactaaacAGCTTCCATCATTGACACAA
AATGATTCTGCTGTTGAACTAGAAGAATCTGATAATGAAATCGAAGAAGA
ACCATTACCACCAAATACTTTGGTTGCTGATTCTGAACAAAAGGAAATTC
TTAAACGTGAGATTAAAGAACGGGAGCGTCAGatcaaattagaaaaagaa
caaatgaaagcagagaaaaagcgagagaaaaagctgaaaaaggaacggga
gaaagaggagaaaaagaagaaaaaactatCCACATCTTCTTTATCAAGCA
CAACATCAGCTCCTGGTTCTCCTGTTGACATTGCAGTCGAGAGTGAGGAT
ATTTATATTGTCCCACAAGACGAAGTTGATGCTGCCAGTCCAGAAAGCCC
AAGAACAGAAGAGGAACAGCAATCTCAATTTGCAATGTACCTAATGGGCA
AGGTTAAGAAAGTTCGGGACCGCACTACCTCGATGGGGTTCAgacctaaa
aacaaaaaacgaggAAAACTGCGCAAAGAGGATATTGAATACATATCTGG
AGAGCATTTGGGACCAATCATTCCACAGGATGAATCATATTATTCCGGTC
TAGGCAACGATGAAGCCTTTTCTGACAGCTTGTATGAAGCACTTCCAGGA
GAAATGGCCTACGAATCACTTGACCTTGTTGCCCAAGCTCAAAGATCACT
TACCTTACCTGTACAAACGGAAAACAGTGGAGATAGTGGTTTTGATGAAA
TCGACCAGGCAAGAATCAAGGCTTGGAGAGATTCTATGGCTCCACCACCT
TTGCCAGGAAATCACCCATTGCAAAATCATTCTGCTCACGAAGAGGAAAA
CCTTTACGAAACTGCTGTGGATTGCAAGAAAGCAGTTCAACAAGGACAAA
GTATGGCAGCTTGGCAAAACTTTTATGACAGTGTTCATCAGAGTACAAAT
GAGATTGCAACATGGGATATGGAAGATGTTGCAAGTTGTCTTTCTGATTT
ACTTTTGACAAATTATATTGAGGTATTTTCCGATTCACAAGTTGATGGCC
AATTACTTCTTGATCTTGATGAAAGTGTTTTGAAAGATCTTGGCTTAAGC
CCCTTTGAAGCTAGAAAGTTACGTAAATTTGTGTTTGGTTGGAGACCTGA
TACGGTTCGACCACCAACCTACCCTCAACGATTGGGATTCGATAGTAAGG
ATCCAACACAATGGAATGAAGGTGATGTTGTTAAACACCTACAAACTATT
GATTTGAatgattttgctaatttttgccAAAGTAACCAAGTAAATGGTGA
ACTATTGAAAGATCTTTGTGTTGACGATGTACTAATGGGAACAATAATTA
CAACCAAAGATAAAAAACTAAAAGCAGTGAAAATTAAGAATTATGTTATT
GACCAATGGCGACCGAAAAAGAAAGGAGAGGGAAATTACATGAGCAGTCA
AAGCATTCTTCCTCCTGAAAAGCGATCTTTGAGCACCGCAAATATTAACA
AAGTTGGAAACAATTCTCCTAAAGTTACAATTGCAAGCCAAGTTTCGGCA
AGTACAACAAATATAAATAAAGTATCTTCTGGAGCATCCCCAAAGGCAAG
AAATTCACcaccaagtaaaaaaattacaacCGGGGGAGATGCTCCACTGA
TAGCACGTATGAAACAACAGCTGGAAGATAATAAAAACAAttggaaagaa
aagaaatga Coding sequence (CDS) from alignment at sc0000230_pilon:474524..477232+ >XLOC_034989 ID=XLOC_034989|Name=XLOC_034989|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5418bp|location=Sequence derived from alignment at sc0000230_pilon:474524..477232+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGCACTTGAGTGGTCGGAATGCAGTGAAACACTTGATGATCTATT
GAAAAATCCTCGAGTACAACTTCCTCAACTTTTGAAACTCTCGTCTTCTT
TCAAAGACATTAACTCGAATGAAAGTCTACAGAAAGACCAGATAATTGTT
ATTCGCTCTAAAGAAACCATTGAGACTATTCACGGTGTTGATGCAGATGG
AAAAACGATTATAATCCCAATTGATTGTCCATTCAAAACGAGACGAAAAG
TTTCACCAGGAAAAGAGAAAGTTTTCGATTCAGTGACAGAGCTTGCTCAA
AGTGACCCTCTACCTCGCTTTGTAGAAGTGAAAGAGGCCCATGATGTTCA
AAATCTATCCAATGGAGATCGATTAAAAGTCGTTATCGTTGAAAAAGCTG
CCGGTGCCCCTTCAGTTTTGCATTGTCGTAGTTCTAGTGGAAAACATGTC
AAAATTTCTGTCAATGAGAACATTTCTTTTCAATCTTCAGTGAGTGATGG
TTCTGATCAAAGTATTGCGAAACTCTCAGAAAAATCAAGGGAGTTCCCAT
TTTGTGTTGAGTTTCTGAAACAGAAAGAAACCCCAGACATTCACACAAAG
CTTGGAATTTTCACCATTCAAGAATGTAAATCAGAAACTGTAGTTATTGC
ATCAGCAACTGTTAACTCAAAGGAAATAGCCATAGTATTTCCACTTCATT
CAGAGTTTAGCTTTCAAGTCACTTCAAAACTTAAGATGGCAAAGGATGAA
GCTTATCGTGAACTTTGTAATAATTCTTCATCTATCGACCCtgaaaaaat
tgttgaattcATAAATCACAAAAGCCCAAAAGACACTCAAATGCAATATG
TTTTGCCActtaaaaagcttcaaaaaatcttAGATTTTGACTACTCTCCG
GATACAGATCAACCTTCGCcaaaggaaaaacaaaagtCCAACGATAAACC
CAAGTCAgcaagaaaggagaaaaaagaatctcctaaaattgaaaaagaaa
acaaatccagaaaggacaaaccaactaaacAGCTTCCATCATTGACACAA
AATGATTCTGCTGTTGAACTAGAAGAATCTGATAATGAAATCGAAGAAGA
ACCATTACCACCAAATACTTTGGTTGCTGATTCTGAACAAAAGGAAATTC
TTAAACGTGAGATTAAAGAACGGGAGCGTCAGatcaaattagaaaaagaa
caaatgaaagcagagaaaaagcgagagaaaaagctgaaaaaggaacggga
gaaagaggagaaaaagaagaaaaaactatCCACATCTTCTTTATCAAGCA
CAACATCAGCTCCTGGTTCTCCTGTTGACATTGCAGTCGAGAGTGAGGAT
ATTTATATTGTCCCACAAGACGAAGTTGATGCTGCCAGTCCAGAAAGCCC
AAGAACAGAAGAGGAACAGCAATCTCAATTTGCAATGTACCTAATGGGCA
AGGTTAAGAAAGTTCGGGACCGCACTACCTCGATGGGGTTCAgacctaaa
aacaaaaaacgaggAAAACTGCGCAAAGAGGATATTGAATACATATCTGG
AGAGCATTTGGGACCAATCATTCCACAGGATGAATCATATTATTCCGGTC
TAGGCAACGATGAAGCCTTTTCTGACAGCTTGTATGAAGCACTTCCAGGA
GAAATGGCCTACGAATCACTTGACCTTGTTGCCCAAGCTCAAAGATCACT
TACCTTACCTGTACAAACGGAAAACAGTGGAGATAGTGGTTTTGATGAAA
TCGACCAGGCAAGAATCAAGGCTTGGAGAGATTCTATGGCTCCACCACCT
TTGCCAGGAAATCACCCATTGCAAAATCATTCTGCTCACGAAGAGGAAAA
CCTTTACGAAACTGCTGTGGATTGCAAGAAAGCAGTTCAACAAGGACAAA
GTATGGCAGCTTGGCAAAACTTTTATGACAGTGTTCATCAGAGTACAAAT
GAGATTGCAACATGGGATATGGAAGATGTTGCAAGTTGTCTTTCTGATTT
ACTTTTGACAAATTATATTGAGGTATTTTCCGATTCACAAGTTGATGGCC
AATTACTTCTTGATCTTGATGAAAGTGTTTTGAAAGATCTTGGCTTAAGC
CCCTTTGAAGCTAGAAAGTTACGTAAATTTGTGTTTGGTTGGAGACCTGA
TACGGTTCGACCACCAACCTACCCTCAACGATTGGGATTCGATAGTAAGG
ATCCAACACAATGGAATGAAGGTGATGTTGTTAAACACCTACAAACTATT
GATTTGAatgattttgctaatttttgccAAAGTAACCAAGTAAATGGTGA
ACTATTGAAAGATCTTTGTGTTGACGATGTACTAATGGGAACAATAATTA
CAACCAAAGATAAAAAACTAAAAGCAGTGAAAATTAAGAATTATGTTATT
GACCAATGGCGACCGAAAAAGAAAGGAGAGGGAAATTACATGAGCAGTCA
AAGCATTCTTCCTCCTGAAAAGCGATCTTTGAGCACCGCAAATATTAACA
AAGTTGGAAACAATTCTCCTAAAGTTACAATTGCAAGCCAAGTTTCGGCA
AGTACAACAAATATAAATAAAGTATCTTCTGGAGCATCCCCAAAGGCAAG
AAATTCACcaccaagtaaaaaaattacaacCGGGGGAGATGCTCCACTGA
TAGCACGTATGAAACAACAGCTGGAAGATAATAAAAACAAttggaaagaa
aagaaatgaATGGAGGCACTTGAGTGGTCGGAATGCAGTGAAACACTTGA
TGATCTATTGAAAAATCCTCGAGTACAACTTCCTCAACTTTTGAAACTCT
CGTCTTCTTTCAAAGACATTAACTCGAATGAAAGTCTACAGAAAGACCAG
ATAATTGTTATTCGCTCTAAAGAAACCATTGAGACTATTCACGGTGTTGA
TGCAGATGGAAAAACGATTATAATCCCAATTGATTGTCCATTCAAAACGA
GACGAAAAGTTTCACCAGGAAAAGAGAAAGTTTTCGATTCAGTGACAGAG
CTTGCTCAAAGTGACCCTCTACCTCGCTTTGTAGAAGTGAAAGAGGCCCA
TGATGTTCAAAATCTATCCAATGGAGATCGATTAAAAGTCGTTATCGTTG
AAAAAGCTGCCGGTGCCCCTTCAGTTTTGCATTGTCGTAGTTCTAGTGGA
AAACATGTCAAAATTTCTGTCAATGAGAACATTTCTTTTCAATCTTCAGT
GAGTGATGGTTCTGATCAAAGTATTGCGAAACTCTCAGAAAAATCAAGGG
AGTTCCCATTTTGTGTTGAGTTTCTGAAACAGAAAGAAACCCCAGACATT
CACACAAAGCTTGGAATTTTCACCATTCAAGAATGTAAATCAGAAACTGT
AGTTATTGCATCAGCAACTGTTAACTCAAAGGAAATAGCCATAGTATTTC
CACTTCATTCAGAGTTTAGCTTTCAAGTCACTTCAAAACTTAAGATGGCA
AAGGATGAAGCTTATCGTGAACTTTGTAATAATTCTTCATCTATCGACCC
tgaaaaaattgttgaattcATAAATCACAAAAGCCCAAAAGACACTCAAA
TGCAATATGTTTTGCCActtaaaaagcttcaaaaaatcttAGATTTTGAC
TACTCTCCGGATACAGATCAACCTTCGCcaaaggaaaaacaaaagtCCAA
CGATAAACCCAAGTCAgcaagaaaggagaaaaaagaatctcctaaaattg
aaaaagaaaacaaatccagaaaggacaaaccaactaaacAGCTTCCATCA
TTGACACAAAATGATTCTGCTGTTGAACTAGAAGAATCTGATAATGAAAT
CGAAGAAGAACCATTACCACCAAATACTTTGGTTGCTGATTCTGAACAAA
AGGAAATTCTTAAACGTGAGATTAAAGAACGGGAGCGTCAGatcaaatta
gaaaaagaacaaatgaaagcagagaaaaagcgagagaaaaagctgaaaaa
ggaacgggagaaagaggagaaaaagaagaaaaaactatCCACATCTTCTT
TATCAAGCACAACATCAGCTCCTGGTTCTCCTGTTGACATTGCAGTCGAG
AGTGAGGATATTTATATTGTCCCACAAGACGAAGTTGATGCTGCCAGTCC
AGAAAGCCCAAGAACAGAAGAGGAACAGCAATCTCAATTTGCAATGTACC
TAATGGGCAAGGTTAAGAAAGTTCGGGACCGCACTACCTCGATGGGGTTC
AgacctaaaaacaaaaaacgaggAAAACTGCGCAAAGAGGATATTGAATA
CATATCTGGAGAGCATTTGGGACCAATCATTCCACAGGATGAATCATATT
ATTCCGGTCTAGGCAACGATGAAGCCTTTTCTGACAGCTTGTATGAAGCA
CTTCCAGGAGAAATGGCCTACGAATCACTTGACCTTGTTGCCCAAGCTCA
AAGATCACTTACCTTACCTGTACAAACGGAAAACAGTGGAGATAGTGGTT
TTGATGAAATCGACCAGGCAAGAATCAAGGCTTGGAGAGATTCTATGGCT
CCACCACCTTTGCCAGGAAATCACCCATTGCAAAATCATTCTGCTCACGA
AGAGGAAAACCTTTACGAAACTGCTGTGGATTGCAAGAAAGCAGTTCAAC
AAGGACAAAGTATGGCAGCTTGGCAAAACTTTTATGACAGTGTTCATCAG
AGTACAAATGAGATTGCAACATGGGATATGGAAGATGTTGCAAGTTGTCT
TTCTGATTTACTTTTGACAAATTATATTGAGGTATTTTCCGATTCACAAG
TTGATGGCCAATTACTTCTTGATCTTGATGAAAGTGTTTTGAAAGATCTT
GGCTTAAGCCCCTTTGAAGCTAGAAAGTTACGTAAATTTGTGTTTGGTTG
GAGACCTGATACGGTTCGACCACCAACCTACCCTCAACGATTGGGATTCG
ATAGTAAGGATCCAACACAATGGAATGAAGGTGATGTTGTTAAACACCTA
CAAACTATTGATTTGAatgattttgctaatttttgccAAAGTAACCAAGT
AAATGGTGAACTATTGAAAGATCTTTGTGTTGACGATGTACTAATGGGAA
CAATAATTACAACCAAAGATAAAAAACTAAAAGCAGTGAAAATTAAGAAT
TATGTTATTGACCAATGGCGACCGAAAAAGAAAGGAGAGGGAAATTACAT
GAGCAGTCAAAGCATTCTTCCTCCTGAAAAGCGATCTTTGAGCACCGCAA
ATATTAACAAAGTTGGAAACAATTCTCCTAAAGTTACAATTGCAAGCCAA
GTTTCGGCAAGTACAACAAATATAAATAAAGTATCTTCTGGAGCATCCCC
AAAGGCAAGAAATTCACcaccaagtaaaaaaattacaacCGGGGGAGATG
CTCCACTGATAGCACGTATGAAACAACAGCTGGAAGATAATAAAAACAAt
tggaaagaaaagaaatga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000230_pilon | genome | sc0000230_pilon:474524..477232 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2709:1 |
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