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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000299_pilon:125969..133259+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034948 ID=XLOC_034948|Name=XLOC_034948|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7291bp|location=Sequence derived from alignment at sc0000299_pilon:125969..133259+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTGCTTGTCAAGATCACTGTTCGATGAATTCAGCGAAGGAGAATC
ACCAAAGAAGGCCAAATTCAAACGTCCGTGTACACCCCCAGTCATCAACA
CAACAAATAAACTTCCATTACCATTCATAACTGAAGATGATGGGTACAAC
AATGATATGCTAATGAGAGATGATTTTAATAGCTCTGGAGAAATGATATC
TCCACCTTGTTCTCCAACAAAACTTATGTCTCCAAGTCCTAATCGTCCCA
GTAGACTATTGCAATCACCACCATCAATACACAGAGGATTTCTTGCATTG
AAATTATTTGATACACCACATACACCAAAAACTCTATTGAGTAAATTTAA
GGATGCAGCAAATGATAATACATCCCCAACAAGCTCTAATGACaataaaa
aagatataaaaaagaaaagaaattctataaataaagagaaaagattGGAC
TTTAATAGTGCAGATTTCAAACATCCAGCATCTATCATTCGTGGCAATAT
TGATAAGAAAGTAGTCTATGCAAACATAAATCCTTTCACACCTTCACCTA
GTGTTGTGAAACACAAACGAACGAGACAAGAATTTGAAAGGTctgtattt
atttttgtttgtagCTGACCCAGGCTGACCTGTCCTGAAAGGGGATTTCA
CCTAAGATATTCGTTAAAATAGATGGggtcctaaaaaaataagccTTTGC
AACAAGTTTGCGAGGTGTACAACCAAATTTAAGACAGTACTTGCTGAGCT
TAGATGTATGTGAGAGGTACCCAAATTCTTAGGAGAGGCCTAAATGGGAA
TTGagacattttgttttgatttttggatgGGATAGCATGTTTAGCTGATT
ATATTCAATTGTTTAACTTATGTTACATATCTCAAGTTATTTACTAACAC
ATATAATGTTTTACTTCTTCTTTCTTAGTGAATCACCTTTGTTTGATAAT
GAGGATGAAGAAGAAATGGAAGCAGAGATCTGTGGTAACCCTGCTAAAGT
AAGAAGCACTGTTGTTTTAGTTTCTGTtatgttgtttttcttgctaAAGT
TGTGACAGACCATGGTTTGTTATTAGGAATCattgtaaaaatattatcaG
TCTGTGTCAGTAGGGGTTTTTGTTTTATACTTGAAAGGATGGTAAATAAA
AATAGATTCTAGGTCAGCGAATTCTTAGCAAACATGCATTTTAGTAGGGG
TTAACCCTTAGTGGGATGTGACTGAATGTATTTGAAAGTAGGTAggattt
taaagcatttttgagAGGGGGCCCAACTTGAATTAGACCTGGCCAGAGTT
TTATAGCAAAACAACTGCTGTTGTAGGCAAAACTGGTAACcccaaaaata
ggcaaaaaattcacaatttttcaaagttgaattCAACGGATATGATTCAT
GGCTCCAACTGAGGTTATAGGTCAAATGTTTTGGAAACATTCCAAAAGTG
ACGTCAAGATTAAGGTTTTTGAAAACACATGCAAAATGTCCACGATTAGT
TAATCTGATGTTTAATCCTGGTGATTAACTAATCAAAATTTAATCGTGAT
TAGGGGTAATAGGGATCTAATcaacttttgaacaaccgggccctgaaCTT
ATGTATAAAACCTTAGGTCCCCCCTTTCTTAAAAGAAGTCGGATGACAGA
TCCCACTCTGTTTTTGCCAGAGGTCCCTgcataggggggggggtgcaagC
CATTATGATTGGTACCATCAGTTAGACCATGTAATTACGAGCAAAAGAGT
ATACTACAACAAGTCTAGATACGATTGAcatcaaattttgtctaaagTGT
AACAGATTTCACAGGATTTTGAACTTTAAATGGCCATACCTTTTTGCTTT
TGACTACCTCAGAATCCTGCCTACTTTCAAGCCATTTCATGCAGTCGCGA
CCAATAGAAGATACTATGGATTTGAGGGATTGCCCCTACTATTTGAAGTG
GAAAAGCAAATAATTATTTAGACtggaaaatcgtgatttttttgcaattc
gctgcatgttttttttttataagcatatgttttttggaaaacaagctcag
ttatgcttagagatattttagactcaggctCATGGTATGTttatcatatg
cttatttttccgaaaaattcaagtccaatttttccaaaatctgtcgTTGC
TATACATGAGGATAGGGAAATAAGTAATGACACAAAGATTGTTCAGGAAA
GTTGTGAACGATTGCCGCGTTTAcgcttgtatttttttaaattaaaattt
tcacttacacacctcaaaagcaagctcagtaatatgcttgtaatatgctt
attttttagacaaattcaggtcttggtatgcttataaacgttatgcttat
aaaaaaaacatgtaggccAAAGTAAGATACCTGTTCTCTCCAttcatttt
tataaaatcaTAATCAtgatcctttttttctttttatagaaaCTTACACT
GCGGGAAACAAACATATCAAGATTTGATGCAGAATTTGTTGATTTAGGGA
AGATTGGTACTGGGGAATTCGGTTCAGTTTACAAATGTTTGAATAGGCTC
GGTTAGTCATTTTTCAGTTCAGAGTTTTGTGTAGATAAATGCCTTAACTA
TATGTATATTTTATTAAGCATCAAGTTCCATAATTGTATTATCATTGTCA
CCACTTGCCTTTGTCTTTCAGATGGGTGTATATatgctttgaaaaagtcc
aGGAAACCACTTGCTGGATCAATAGACGAGTAAGTGAATCGACATTTAGA
TCTCGTCCTGTTCAGTCTTTACAGTCTTGATCTTTTCTTGTCTTTTCAGA
GTTACCCaccgtgtctctacgattcacttgaGTTTGGTCTCCCGcgagca
tcgctctcccagtgtcgttcgagggtcatggtatacgccatggcttggca
gctcgcgtctgtcgACTTGCAGTGTCactgtcagcgccgtgattcctact
ccttcgtgggtaggacccatcccgaatgcattcaGAAGGCTCATATCTAT
CTATTTTCAGAGATTTTTGTGATGTAACTCttatgaaatttgattgttGT
GTAGCCTAAATTTGAGAGAATTGTAATCTGATAAGATATTTCTTTATCAT
ATTCAGACAAATGGCTCTTCGTGAAGTATGGGCTCATGCTGTGTTGGGTC
ATCATCAACATGTAGTGCGTTACTATTCAGCATGGGCAGAAAATAACCAC
ATGCTGATACAAAATGAATATTGTAATGGTTCGTAACATAATGTCAATAt
gaattctttaaagaaaaatgtttgttttggcTCCAACTTTCTTAAATAAG
ATGAGACTGAATGCCTAACTGCAGATCTCTGTGGATAGAAGGCAATCTAA
AATCTCCATTTCATGCCCATCAACAGTGCTTGCTACAATTGTTCTTGTTC
TTTTGCTTAGATAGTGTTTAACCTGgtttaattgaaaattgatttcatGA
TGATTCACCCTTATCTTTTTAGGAGGTAACCTGTCAGAAGTGATAATCAA
GAATAAATTccagaaaaatcaaatgaaactTGAAGATCTGAAACAGTTAC
TGCTACAGCTGTCTAAAGTAAGAAACCTTTTAAAAGTCAACTTTATTAGC
AGTCTGTTGAACGAGTCTTTAAGatggatattttgaaaatcactATAAAC
TACAAGAAGCCGGTGATTAGGTTATAGTTAATAATTATTCAAGGGAGTCA
GGCAGCAGTGCACAGTATATAgctcaagaaagaaaaaatactaATTAAAA
TTAGTTTTGAGCTTTAATCTTTCGCAATTGTTTTTGTGATCAGGGACTGA
AATATATTCATCACCAGCAACTAGCACATATGGACATCAAGCCAGGTTTG
TTGTACTTGcatgatgtttttctttcatactTCTCTCTATTCGTCACTGG
TATTTTAGTGACATATTTTCGAACCAAAATTTATACATTATAAAGTCTTC
ATACAAAATGACACATTAAGGAAGGCATAAGAAAAACAAAGGTGACACCA
ATATAATGGTTGGGAAAGAGAATAttaccaaaaaaatattaaatatagtG
CAGAGCTTTACACACTCCTTTTTTAGGCAATGTTTTTCTGTGCTCGCAAC
CCAAACCAAGGTCGGAAGCAACTTCAGCAGAAGAGAGCAGTGATGATGGG
TATTGTGGAGAAGAGAATGAAACAAATAGTGGGAAGAAGATCGATAATTA
TTATCCAATAACATATAAAATAGGTAGGTTAATCTCATATGTTTTAAGTC
CCAACATAGTTAAGCTATTAATTTAGATGACTGATTTTCCACCTTCCTTT
GTTGGCACATGAAAGTAAAAAGAATAGATGGAgtgaaaacgtctcggtaa
agACCTAAATGATGGTCGTTTAAATCTCAATCCATTCAAAGTGGCTTTCC
TTTGATTTACCGTTATTGGAAGCAAGGCAATTCAAGATTTAACTTTAGTA
ATCATATTTTTATAGCTAAGTAATACAGTTCTGTTGATGAAGGCTGAGAT
CAACCTTTCCAACATAATATGTTTAACAACTGAGCCCAAAAACTAGCAAG
cgcaatcaaaagaaaaatgtgttaATGGTGAAAATCAAATGATGTAAATC
GAACACTGCCACTTAGGACACACCCATCTAGCCAACCCCACCACACCTAA
ATAACCATTTCCTTTAAACATACACAATAAAAAACACAAATCGACAAAAA
GACAGAAAGAGGATGTACTATTAATTTTCGCAAAActtaattttgtgaaa
aaccCTTGTTAAAAATGCGATTGAAAATAGTCTAAACAGATGCCAGgcta
aaatgataaaagaatttCATAAGATGCATTTTCAGGCCAGCATtgtgaat
tttcagattttcgtcatattgtttttgaaaatgttaagtTCTTTTCTTCC
ATTTCAATTACATTGCATCTCAGATTGTAGTTTGCTTACACCAAACAACT
ATGTATTATGTTCCCTTAAGTGAAGCCTGTCATTAGAGCATGTATAAATG
TGGCCTATTGTTCTTCGTGTAGTCTCTGGCTCTATCTCGATTTGTGAGTA
ATTAAAACAGTAGATAAAACGATTCTCTTAtttgcttgtttgtttgtttt
aaggTGACTTGGGACATGTTACGTCAGTTGTAAAACCACAAGTTGAAGAA
GGAGACTGTCGATTTCTTTCGAATGAAGTTTTGCATGAGGTGAGAGAAGA
AAGACACCCAGTCCATTCCTCTTGTCTGATTGTTTCAAGTTCATTTTCTT
CTAATAAAGGAATAAAGGTCTATTATACCACATTTATACCAGAGTTTGGA
AATATGAATTACTAATTACTATAATATGTCTCTTCCTCCTCAGGACTACA
CTTCATTGACGAAAGCTGACATTTTTGCACTCGGATTGACAACTTATTTA
GCTGTAAGTAACAAATACTAAATTGAGTTGAGTTTGGAGAGACTTTGTTT
TAATTCCAATCTTCATGAAATTCAGGACTGACGTAAATTATTAAATTGTT
GCAAGAAAGCGCTTAATTTTACTGGTCTTACCAGCTTTGAAAATGTCATC
GCTTTTCACTCAAAATAATGGTAAATATTGGTATTTTTAGGCTGGTGGTA
ATGATCTGCCCAAAAATGGTCCACTGTGGCATCATATCAGGTAATTTGCC
TTTTCTCTGACTTTCACAGAGTCTTAAAATTCCCAAAGAACAAGAAATTG
CTTTGACATggtcaataatttttttgcccGCCAGTAAAGGAAAGCTTTAC
TTAaggagaaataaaaaaatgcttGTTTCAAAGCACACACCCCGTCAGCT
tacaaccatagtcccccccccggaaggcagctaggacacgcagacaaaaa
gcgtgatagcgcaatcttatgttgctttttataaaacttttgtcataact
tttcaaattcagcaaTGAGTGACTTAGATTTACGAGACTTACGAAGAAGG
AACTTTtgttttaccgccttttgaatgtctTTTAAacgttgctgttgttc
taacaaactggccttgtgatttttatgttttatttcatatttgttctttt
ctgtaacagattttgtttaaaagattttgtttcgttttgaaaagaattcg
aatgtcttaaatcaaataaggtcgttaattacaaaagaagagagagaaaa
aagaaaaacatgcgTCCCGGGCAAGTCAAGGCAGAAATTATAATCTAtcg
atcaaaacaaacttatcgaacaactcaaagtcatcttttaaaagaacaaa
aacattgcttgcgaaaacgaaagtgacacacagacaaaATGACATACACA
CTACCGCTATTATTATATAGAAGCCCTCTGTCAACCAATCATCTGCTTTT
TATGTTTAGAAATACTGGATTACCACATCTACCTAACCATTCAAAAGTAT
TCAATGACCTGTTAAATGTAAGGAaaattttaatgtattttttaaattat
ggaTAACTTCATTGGAAACTTTTGATATTGTTGAATTTTGTGACTTTATT
ATACAAATTACCaaaaaaaGGGTCCcgaaaaacaaaagattctttCACCA
gaattgatttttcttcttcaaaaggCAATGATTTCAAAAGAACCATCAGA
CCGACCGAGTGCATCTGAAGTTTTATCCAACCCATTCCTTGGACAAATGA
CAAAAGTAAGTAAATTTCTATCCTTCAAGATATAAAAGTTCTTCCCAAAC
AATCTTTTGACGGGTTactcaaattttattatttacgCACTGAGGATCTA
ATACCTATCAAAATGAACTAAAGTTGACATTTTTCGAAAGTGAGTTCACA
ATACTTTATTTTGCGATTGATTATCACACTCAAACGtttttttCTGTTCT
TTAGACACAGTTACGAAAAGAGCTCAATGAAGAGAAGTTCAAAAACGAAG
TCCTTTCACGGTATGTACCCATTCTTTCCCCAAATATAAGGccacttttt
tttctataaaatttggagttttttcatttaattcgataaaagagctttga
gtttttcACAGCCAAGTCTtctatttatttgaatttttgttcGATCCATG
CTATTTCTATAAGGGGTACATGTCGTTGGTGTTTTGTCTACTCTCAATTT
TAAGACGATATTGTTTTTCGACACAATAATACTGGATAATGCTATatatt
gtaaattatttttccttctttttttctagaaaactgAAGGCGGCTGAACA
AGCAGCTGAACAGCAAGTGGAGCCTGGTAAAAACAAACGCCTGGTTGGTC
ATAAAGTAACGAGAAGTATGAGCATGAGTGTTATAATGTGA Coding sequence (CDS) from alignment at sc0000299_pilon:125969..133259+ >XLOC_034948 ID=XLOC_034948|Name=XLOC_034948|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3498bp|location=Sequence derived from alignment at sc0000299_pilon:125969..133259+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTGCTTGTCAAGATCACTGTTCGATGAATTCAGCGAAGGAGAATC
ACCAAAGAAGGCCAAATTCAAACGTCCGTGTACACCCCCAGTCATCAACA
CAACAAATAAACTTCCATTACCATTCATAACTGAAGATGATGGGTACAAC
AATGATATGCTAATGAGAGATGATTTTAATAGCTCTGGAGAAATGATATC
TCCACCTTGTTCTCCAACAAAACTTATGTCTCCAAGTCCTAATCGTCCCA
GTAGACTATTGCAATCACCACCATCAATACACAGAGGATTTCTTGCATTG
AAATTATTTGATACACCACATACACCAAAAACTCTATTGAGTAAATTTAA
GGATGCAGCAAATGATAATACATCCCCAACAAGCTCTAATGACaataaaa
aagatataaaaaagaaaagaaattctataaataaagagaaaagattGGAC
TTTAATAGTGCAGATTTCAAACATCCAGCATCTATCATTCGTGGCAATAT
TGATAAGAAAGTAGTCTATGCAAACATAAATCCTTTCACACCTTCACCTA
GTGTTGTGAAACACAAACGAACGAGACAAGAATTTGAAAGATGGATTGCT
TGTCAAGATCACTGTTCGATGAATTCAGCGAAGGAGAATCACCAAAGAAG
GCCAAATTCAAACGTCCGTGTACACCCCCAGTCATCAACACAACAAATAA
ACTTCCATTACCATTCATAACTGAAGATGATGGGTACAACAATGATATGC
TAATGAGAGATGATTTTAATAGCTCTGGAGAAATGATATCTCCACCTTGT
TCTCCAACAAAACTTATGTCTCCAAGTCCTAATCGTCCCAGTAGACTATT
GCAATCACCACCATCAATACACAGAGGATTTCTTGCATTGAAATTATTTG
ATACACCACATACACCAAAAACTCTATTGAGTAAATTTAAGGATGCAGCA
AATGATAATACATCCCCAACAAGCTCTAATGACaataaaaaagatataaa
aaagaaaagaaattctataaataaagagaaaagattGGACTTTAATAGTG
CAGATTTCAAACATCCAGCATCTATCATTCGTGGCAATATTGATAAGAAA
GTAGTCTATGCAAACATAAATCCTTTCACACCTTCACCTAGTGTTGTGAA
ACACAAACGAACGAGACAAGAATTTGAAAGTGAATCACCTTTGTTTGATA
ATGAGGATGAAGAAGAAATGGAAGCAGAGATCTGTGGTAACCCTGCTAAA
TGAATCACCTTTGTTTGATAATGAGGATGAAGAAGAAATGGAAGCAGAGA
TCTGTGGTAACCCTGCTAAAaaaCTTACACTGCGGGAAACAAACATATCA
AGATTTGATGCAGAATTTGTTGATTTAGGGAAGATTGGTACTGGGGAATT
CGGTTCAGTTTACAAATGTTTGAATAGGCTCGaaaCTTACACTGCGGGAA
ACAAACATATCAAGATTTGATGCAGAATTTGTTGATTTAGGGAAGATTGG
TACTGGGGAATTCGGTTCAGTTTACAAATGTTTGAATAGGCTCGATGGGT
GTATATatgctttgaaaaagtccaGGAAACCACTTGCTGGATCAATAGAC
GAATGGGTGTATATatgctttgaaaaagtccaGGAAACCACTTGCTGGAT
CAATAGACGAACAAATGGCTCTTCGTGAAGTATGGGCTCATGCTGTGTTG
GGTCATCATCAACATGTAGTGCGTTACTATTCAGCATGGGCAGAAAATAA
CCACATGCTGATACAAAATGAATATTGTAATGACAAATGGCTCTTCGTGA
AGTATGGGCTCATGCTGTGTTGGGTCATCATCAACATGTAGTGCGTTACT
ATTCAGCATGGGCAGAAAATAACCACATGCTGATACAAAATGAATATTGT
AATGGAGGTAACCTGTCAGAAGTGATAATCAAGAATAAATTccagaaaaa
tcaaatgaaactTGAAGATCTGAAACAGTTACTGCTACAGCTGTCTAAAG
AGGTAACCTGTCAGAAGTGATAATCAAGAATAAATTccagaaaaatcaaa
tgaaactTGAAGATCTGAAACAGTTACTGCTACAGCTGTCTAAAGGACTG
AAATATATTCATCACCAGCAACTAGCACATATGGACATCAAGCCAGGGAC
TGAAATATATTCATCACCAGCAACTAGCACATATGGACATCAAGCCAGGC
AATGTTTTTCTGTGCTCGCAACCCAAACCAAGGTCGGAAGCAACTTCAGC
AGAAGAGAGCAGTGATGATGGGTATTGTGGAGAAGAGAATGAAACAAATA
GTGGGAAGAAGATCGATAATTATTATCCAATAACATATAAAATAGGCAAT
GTTTTTCTGTGCTCGCAACCCAAACCAAGGTCGGAAGCAACTTCAGCAGA
AGAGAGCAGTGATGATGGGTATTGTGGAGAAGAGAATGAAACAAATAGTG
GGAAGAAGATCGATAATTATTATCCAATAACATATAAAATAGgTGACTTG
GGACATGTTACGTCAGTTGTAAAACCACAAGTTGAAGAAGGAGACTGTCG
ATTTCTTTCGAATGAAGTTTTGCATGAGgTGACTTGGGACATGTTACGTC
AGTTGTAAAACCACAAGTTGAAGAAGGAGACTGTCGATTTCTTTCGAATG
AAGTTTTGCATGAGGACTACACTTCATTGACGAAAGCTGACATTTTTGCA
CTCGGATTGACAACTTATTTAGCTGACTACACTTCATTGACGAAAGCTGA
CATTTTTGCACTCGGATTGACAACTTATTTAGCTGCTGGTGGTAATGATC
TGCCCAAAAATGGTCCACTGTGGCATCATATCAGGCTGGTGGTAATGATC
TGCCCAAAAATGGTCCACTGTGGCATCATATCAGAAATACTGGATTACCA
CATCTACCTAACCATTCAAAAGTATTCAATGACCTGTTAAATAAATACTG
GATTACCACATCTACCTAACCATTCAAAAGTATTCAATGACCTGTTAAAT
gCAATGATTTCAAAAGAACCATCAGACCGACCGAGTGCATCTGAAGTTTT
ATCCAACCCATTCCTTGGACAAATGACAAAAgCAATGATTTCAAAAGAAC
CATCAGACCGACCGAGTGCATCTGAAGTTTTATCCAACCCATTCCTTGGA
CAAATGACAAAAACACAGTTACGAAAAGAGCTCAATGAAGAGAAGTTCAA
AAACGAAGTCCTTTCACGACACAGTTACGAAAAGAGCTCAATGAAGAGAA
GTTCAAAAACGAAGTCCTTTCACGaaaactgAAGGCGGCTGAACAAGCAG
CTGAACAGCAAGTGGAGCCTGGTAAAAACAAACGCCTGGTTGGTCATAAA
GTAACGAGAAGTATGAGCATGAGTGTTATAATGTGAaaaactgAAGGCGG
CTGAACAAGCAGCTGAACAGCAAGTGGAGCCTGGTAAAAACAAACGCCTG
GTTGGTCATAAAGTAACGAGAAGTATGAGCATGAGTGTTATAATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000299_pilon | genome | sc0000299_pilon:125969..133259 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1639-1749:7181 |
| Aaloc | 1582-1635:6855 |
| Aaloc | 1501-1581:6575 |
| Aaloc | 1444-1500:6361 |
| Aaloc | 1393-1440:5591 |
| Aaloc | 1333-1392:5344 |
| Aaloc | 1249-1332:5106 |
| Aaloc | 1102-1245:4079 |
| Aaloc | 1048-1098:3794 |
| Aaloc | 955-1047:3475 |
| Aaloc | 832-951:3108 |
| Aaloc | 775-828:2674 |
| Aaloc | 661-771:2440 |
| Aaloc | 592-660:930 |
| Aaloc | 1-588:1 |
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