|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000299_pilon:146137..149877+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034947 ID=XLOC_034947|Name=XLOC_034947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3741bp|location=Sequence derived from alignment at sc0000299_pilon:146137..149877+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGAAGAGTCACAAGAAAGCAGGACTGGTATGAACAAAGATCTCGACCA
ATGGATAGAACAATTAAACGACTGTAAACAATTATCAGAAAACCAAGTAA
AAAATTTAACAGATAAGGTATGTTATATCTCTTCTATTTTGTTTTACTAT
GATAGTTTTGTAATTTGATCCAAAATCAATAATAGCATGAAAAGAATGGT
TTCGAGGTAAATatttactgtatttgtattttcatgttgcattttttaga
aaaaagttttgccagttttaattttattttccacTCCTTATCCATTTCTA
CTCCAGGCAAAAGAAATATTATCAAAAGAATCAAACGTCCAAGATGTCAA
ATGTCCAGTCACAGTATGTGGTGATGTTCATGGGCAATTTCACGACTTGA
TGGAACTCTTCCGTATAGGGGGCAAATCACCCGACACCAACTATTTATTC
ATGGGTGATTACGTAGATCGTGGCTATTACTCAGTGGAAACTGTCACATT
ACTCGTTGCACTGAAGGTTAGAGTCATTGTTTGCCTTTGCAGGCTGCTCT
TATTTGAtcttattgtattttttttttgcaattaaagACACTCCAAAACA
TCTCCCCCTTTCACAAAATCTGGTTCTTTTCGAAGAAGCTATTTTGTTTT
CCTAAATTAGTCTAAATTTTTCTTGAGATCAAATTTCcccttcattattt
tttttggacctacctcggaggtcctataaattaaccgatgtccgtccgtt
cgttcgtccgttcgtccgttcgtccgttcgtccgtccgtctgttaccagc
ttttctcaggattggctcattagttttttttgatttttggcacaatgatg
caaaatggtaatgcccaaaatgtgacggagcccgattttcgaaaaaaaat
tatttccggccgtaaatgccggaaatatgccggaaaaaccgattttttgg
ctttttctcaagatttcatcattagttttttctgattttttgcacaaaga
tgcgtattagcaatgcccaaaacttggccgagtccgatttttgagaaaaa
attttttccggtcgaaaatgccggaaatatgccggaaatcgccatttttg
cagattttcatcggactttttccttatatttcgttgtttttttttcacac
acaaaaacattattaatagcaatgcccaccatgaagcatggttcaatcgt
caatagaactgagttttgaagccggaactttctaaaaatcgccggtgcag
cccattttcgccggaaaaacggtatttcttgattttctcgagctgtactt
tatatttttttatgaaattttgcacactgatgcaaaatgataatacctaa
aatgtgacagagcccgattttggaaaaaaaaattttccggccgaaaatgc
cggaaatatgccggaaaaacaggttttttggcattttctcgagattttat
cattagttttttctgattttttgctcaaagatgcgtattagcaatgccca
aaacttggccgagtccgatttttgagaaaaaattttttccggtcgaaaat
gccggaaatatgccggaaatcgccatttttgcagattttcatcggacttt
ttccttatatttcgttgttttttcacacaaaaacattattaatagcaatg
cccaccatgaagcatggttcaatcgtcaatagaactgagttttgaagccg
gaactttctaaaaatcgccggtgcagcccattttcgccggaaaaacggta
tttcttgattttctcgagctgtactttatatttttttatgaaattttgca
cactgatgcaaaatgataatacctaaaatgtgacagagcccgattttgga
aaaaaaaattttccgcccgaaaatgccggaaatatgccggaaaaacaggt
tttttggcattttctcgagattttaccattagttttttctgattttttgc
tcaaagatgcgtattaacaatgccaaaaacatggccgagtccgatttttg
agaaaaaAttttttccggccgaaaataccggaaatatgccggaaaaactg
tttttttggcattttctcgagattttatcattagtttttgctgatttttt
gctcaaagatgcgtattaacaatgcccaaatcattgtcgagtccgatttt
tgagaaaaagatttttccggccgaaaatgccggaaatatgccagaaatcg
ccgtttttgcagatttgaattgggctttttccatacatttctttgttttt
tcacttaaaaaaattatcgataacaatgccaccatcaagcatgattcaat
tgtcaataaaactttctatttcttttttccctaaacccctccccccatca
acaatcaatgatgacatttaatgcattttcgctaagcgctatattttctt
aatgattgtttttctccttattgctatctaagtttcatcatcaggtaggt
ccattcagcatgttgcttgttctcCCTTTCTCATCAACTTCATGATTTTT
TGAATGCCTATCTATCAAACTATTAATTAATTTTGCTCTTGTGTCAtaac
tttgttaaattttagGTACGATATCCAGAAAGAATCACTATTCTTCGCGG
AAATCACGAAAGTCGACAAATTACACAAGTATACGGGTTTTACGATGAAT
GTCTAAGGAAATACGGTAACGCTAATGTTTGGAAATACTTCACGGACTTG
TTCGACTACCTTCCATTAACGGCACTCGTTGACAGTCAAGTAAGTCCTTT
TTACAGCTTCTAAATCAAGCGAAATTTACCTTAGGCAACAAGCTCTTTCT
CGAAGGAGTACATAAAAAACCTGTTTTCGAATGAGTTTTGACCCTGGAGG
GGTAAAGTTAATAACAAAAAACTCAGAATAACAGAAGCTCTCCTCTTTTT
TGAGAGAACATTCGAATAAGTGATGTGTAAGGATTTGTATGCCCTTGCGA
TGCTACGGCAATTTCTGTAAATTCTTCGTTTCCTACACAGTGTTCACTGA
TCAGGGACTTTCATATTTCTCTTTTCTAGATCTTTTGTTTACACGGTGGT
TTATCACCTTCAATCGACACACTTGATCACATTCGTGCACTCGACCGTTT
ACAAGAAGTACCACACGAAGGACCCATGTGTGATCTCTTATGGTCTGACC
CTGATGACCGTGGAGGTTGGGGAATCTCACCTCGCGGTGCTGGATATACT
TTTGGACAGGACATCTCGGAAACTTTCAATCATACAAACGGATTAACACT
TATCGCTCGTGCTCATCAACTTGTTATGGAAGTGAGTTCTTTTTTAGTAC
CTTTTTCATCACTCCAAACTTACGCTAAGTTACATGGCCTTGTAAATTGA
TGTCTTTCCATACTTTTCACCTTGAAAGCTACCATGAATAGATAAGTTTC
AAGGAACTCTTCATTTAACTCATTCAATCTGATTCAGTTATGATGATAAC
TTCTAATTATATGGATTGTAGTTGAAAAGTTATGCCCCTGCTCCTAGGAA
GATTAACTCCCATAAAAGATACAGTTAAAATAATCACACCATTTTTTAGG
GTTATAATTGGTGTCATGATCGAAACGTCGTCACGATATTCAGCGCACCT
AATTATTGTTATCGGTGTGGTAACcaagccgccattatggaaCTGGACGA
CGCGCTCAAATATTCATTCTTGCAATTCGACCCTGCTCCAAGGCGAGGAG
AGCCGCATGTCACTAGACGCACCCCAGACtatttcctataa Coding sequence (CDS) from alignment at sc0000299_pilon:146137..149877+ >XLOC_034947 ID=XLOC_034947|Name=XLOC_034947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000299_pilon:146137..149877+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGAAGAGTCACAAGAAAGCAGGACTGGTATGAACAAAGATCTCGACCA
ATGGATAGAACAATTAAACGACTGTAAACAATTATCAGAAAACCAAGTAA
AAAATTTAACAGATAAGatGGAAGAGTCACAAGAAAGCAGGACTGGTATG
AACAAAGATCTCGACCAATGGATAGAACAATTAAACGACTGTAAACAATT
ATCAGAAAACCAAGTAAAAAATTTAACAGATAAGGCAAAAGAAATATTAT
CAAAAGAATCAAACGTCCAAGATGTCAAATGTCCAGTCACAGTATGTGGT
GATGTTCATGGGCAATTTCACGACTTGATGGAACTCTTCCGTATAGGGGG
CAAATCACCCGACACCAACTATTTATTCATGGGTGATTACGTAGATCGTG
GCTATTACTCAGTGGAAACTGTCACATTACTCGTTGCACTGAAGGCAAAA
GAAATATTATCAAAAGAATCAAACGTCCAAGATGTCAAATGTCCAGTCAC
AGTATGTGGTGATGTTCATGGGCAATTTCACGACTTGATGGAACTCTTCC
GTATAGGGGGCAAATCACCCGACACCAACTATTTATTCATGGGTGATTAC
GTAGATCGTGGCTATTACTCAGTGGAAACTGTCACATTACTCGTTGCACT
GAAGGTACGATATCCAGAAAGAATCACTATTCTTCGCGGAAATCACGAAA
GTCGACAAATTACACAAGTATACGGGTTTTACGATGAATGTCTAAGGAAA
TACGGTAACGCTAATGTTTGGAAATACTTCACGGACTTGTTCGACTACCT
TCCATTAACGGCACTCGTTGACAGTCAAGTACGATATCCAGAAAGAATCA
CTATTCTTCGCGGAAATCACGAAAGTCGACAAATTACACAAGTATACGGG
TTTTACGATGAATGTCTAAGGAAATACGGTAACGCTAATGTTTGGAAATA
CTTCACGGACTTGTTCGACTACCTTCCATTAACGGCACTCGTTGACAGTC
AAATCTTTTGTTTACACGGTGGTTTATCACCTTCAATCGACACACTTGAT
CACATTCGTGCACTCGACCGTTTACAAGAAGTACCACACGAAGGACCCAT
GTGTGATCTCTTATGGTCTGACCCTGATGACCGTGGAGGTTGGGGAATCT
CACCTCGCGGTGCTGGATATACTTTTGGACAGGACATCTCGGAAACTTTC
AATCATACAAACGGATTAACACTTATCGCTCGTGCTCATCAACTTGTTAT
GGAAATCTTTTGTTTACACGGTGGTTTATCACCTTCAATCGACACACTTG
ATCACATTCGTGCACTCGACCGTTTACAAGAAGTACCACACGAAGGACCC
ATGTGTGATCTCTTATGGTCTGACCCTGATGACCGTGGAGGTTGGGGAAT
CTCACCTCGCGGTGCTGGATATACTTTTGGACAGGACATCTCGGAAACTT
TCAATCATACAAACGGATTAACACTTATCGCTCGTGCTCATCAACTTGTT
ATGGAAGGTTATAATTGGTGTCATGATCGAAACGTCGTCACGATATTCAG
CGCACCTAATTATTGTTATCGGTGTGGTAACcaagccgccattatggaaC
TGGACGACGCGCTCAAATATTCATTCTTGCAATTCGACCCTGCTCCAAGG
CGAGGAGAGCCGCATGTCACTAGACGCACCCCAGACtatttcctataaGG
TTATAATTGGTGTCATGATCGAAACGTCGTCACGATATTCAGCGCACCTA
ATTATTGTTATCGGTGTGGTAACcaagccgccattatggaaCTGGACGAC
GCGCTCAAATATTCATTCTTGCAATTCGACCCTGCTCCAAGGCGAGGAGA
GCCGCATGTCACTAGACGCACCCCAGACtatttcctataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000299_pilon | genome | sc0000299_pilon:146137..149877 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 754-945:3550 |
| Aaloc | 502-753:3030 |
| Aaloc | 328-501:2566 |
| Aaloc | 118-327:307 |
| Aaloc | 1-117:1 |
|
