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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000299_pilon:152454..154882+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034946 ID=XLOC_034946|Name=XLOC_034946|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2429bp|location=Sequence derived from alignment at sc0000299_pilon:152454..154882+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAAACTCGAAAAAAGACATGGGCATAGTGAAGGTTTGGTACTTTGCTGT
TTTGACTTTGTTGTCAACGCAATTGTTGAATTGGTAAGCTTTCTATAAGA
CTGTTGATATTCCCTAGTTCACCCTTCAGCATAAAAAAGTTACGAAAGTT
AGGTACGTTGAACTTTAAGTCGAAATCAACTTTGCAAGCATGAtgaggga
aatttcaaaaatgttataaCAATTTTCCAGAAAATCCCGTTAGCAAAatt
tcgttttcattttcagtttgcCACACAGAAGATCACGTCGAATGGTGAAT
GGGGAAGATGCGAAACTAGTGGACTGGTATTTCACAGTGTTGTTGGTGAA
AGAGGTAGACGACCATCCATTGTACTGTGGCGGTGTGCTCATAAAAAATG
ATTGGATACTGACTGCTGCTCACTGTGTGAATGGAGTTGTTGATAGTCCT
CAACTTCTTTCGGTTAGAATAGGTGAGTGCTGTGCTTACAATCAACCTTT
ATATTGTCCTTTATATGCAATGCTAAGCCTTCCAAGAAAGCTCACTTTTA
GGAACATTAAACCCACTCGTATTGTACTACTTGGAATGACcgtttgttct
ttttttcaggATAGTTGATAACTGTTAGTACATACAATACAGCTTTTTAG
TCTAAATCTGTGATATGATCTTTTTAGAAGGGTTGTTAATTCGGTTTGTG
TAGAAGACTTGCTGAAATAAACCCCCAACTTATATGACCCTTCATAACAA
CTTATTTTTAATACAGGCTCGACCAAGCGATCTTTACTGAAAGAATACAC
AAAATTTCAATATGAGGTGTCCAAAATCTACATCCATTCTGCCTACAATG
ATGAACAGATACCATCAGATGATATTGCCCTGATCAAGCTGAAATACCCT
ATCGTCAGCAATCGATACAATTTTGTACGACCCATCGAGATTGCTTTGTG
GCGATTCAAAGGTTCCGAAAGACACTCCATGCACTGCCAAGCTGCAGGTT
TGTCTGATGTTTTTTGTGGGAATATTTACACCCCTGTGCCTGTTCTGTCG
TTTAAGGATGATACAATATtgagaaatttttatatttgCTGCTCCAGATT
GTTATTATAATTTGTCTATTTGTCTATTCTTAGACAGACCAAAAAGCCTC
AAGTGATTCAGGGCTAGCTATTCAATAGACAATTGCCAAATTTCATTCTA
GTTAATGTAAATTAtaaattctcataaaaaaacagtTTGTGATAAGTAAT
TTTTCTAAGAGGAATGAGAATCattattgagatttttttggatGTGAAAC
ATTCCGTATGGTAGGTTTACACTACAAAGTTTTTGCCTTAATAATGTGCC
AAGGGAATGACGATGTCATTTTAAGGCTCagtaaaaaaacttgtatgtAA
ATTACGTCATACGTCATAGATCGCCTTTTTTGCTTAACCACTTTTTACTC
TATGCCGTGAAGATTTAGGAATCAGGCTAAAACGCCTCGGGTGCAGTCTA
AAAACTCACGTCATAGATTCCGTACGTcatagatagcttcttgcttaacc
tcgctattttGCATTTTCACCACCATAGGTTGGGGAAAAACCAAATCTTT
CTCAAGTATTCAAGAAATGAATGACACAAAACATGAACCCTCGTTATCTC
TTCAAAAAATCGACGTTCCATTACTGGGCAGGAACCATTGTATTTCTGAA
TTCGATAAAGAAAATGGCACAACGATGTTGAGCAACAAGAATTTGTTTTG
GGACAAAATGATGTGCGGTGGAAGTTCGAACCCGAATATAGGTAACAATT
TGTCTTACAcaaacatccctgtctcacttGTCATGTTCTCATAACAGATT
ACCCAATCAGCGTATACCatgctctaaagggatatgtAAAATCAAGAGCA
TTTAATCATGGAGGTATGAAGAAAAACATGAGATATAACACTATAACCAC
CCTCGCCCTACAATTAAAAATGATTTAACTCTTATTTAACCCTTATTTAA
CCCTTATTGGACAAGTATATACAGTCACCTTCTTCTAGTCAACACTActt
tgtttttaatgaaaataaaaagcaGTTTAGTTAGTTTCATGGTAATCCAT
TGTGTTTCTATATGGATTACTCTAGTCTAAATTACTTTAGTGGATGCCGG
CAGCCTAGGATTTCTCCTGAATTTCTCCAGTCCTAACTAAAAATATTACC
ACTTGTTTTAGGAACACCCTGCCTCTATGACTCTGGATCTCCTTTAGTAT
GCGAAGATATCTACGGAAATCGTCAACTATACGGAATAGCTATTGCAATA
CATGGACCGGAAATTAACGAGCGACCTTGCACACCCGGCAAACAAATCTC
AGTTTTCCTTAGAGTACCACATTACGCTAAGTGGATTATTAAAACAACCA
AAGATGCTCACGAAATAGATGAGAAATAG Coding sequence (CDS) from alignment at sc0000299_pilon:152454..154882+ >XLOC_034946 ID=XLOC_034946|Name=XLOC_034946|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1902bp|location=Sequence derived from alignment at sc0000299_pilon:152454..154882+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAAACTCGAAAAAAGACATGGGCATAGTGAAGGTTTGGTACTTTGCTGT
TTTGACTTTGTTGTCAACGCAATTGTTGAATTGGAAAACTCGAAAAAAGA
CATGGGCATAGTGAAGGTTTGGTACTTTGCTGTTTTGACTTTGTTGTCAA
CGCAATTGTTGAATTGtttgcCACACAGAAGATCACGTCGAATGGTGAAT
GGGGAAGATGCGAAACTAGTGGACTGGTATTTCACAGTGTTGTTGGTGAA
AGAGGTAGACGACCATCCATTGTACTGTGGCGGTGTGCTCATAAAAAATG
ATTGGATACTGACTGCTGCTCACTGTGTGAATGGAGTTGTTGATAGTCCT
CAACTTCTTTCGGTTAGAATAGtttgcCACACAGAAGATCACGTCGAATG
GTGAATGGGGAAGATGCGAAACTAGTGGACTGGTATTTCACAGTGTTGTT
GGTGAAAGAGGTAGACGACCATCCATTGTACTGTGGCGGTGTGCTCATAA
AAAATGATTGGATACTGACTGCTGCTCACTGTGTGAATGGAGTTGTTGAT
AGTCCTCAACTTCTTTCGGTTAGAATAGGCTCGACCAAGCGATCTTTACT
GAAAGAATACACAAAATTTCAATATGAGGTGTCCAAAATCTACATCCATT
CTGCCTACAATGATGAACAGATACCATCAGATGATATTGCCCTGATCAAG
CTGAAATACCCTATCGTCAGCAATCGATACAATTTTGTACGACCCATCGA
GATTGCTTTGTGGCGATTCAAAGGTTCCGAAAGACACTCCATGCACTGCC
AAGCTGCAGGCTCGACCAAGCGATCTTTACTGAAAGAATACACAAAATTT
CAATATGAGGTGTCCAAAATCTACATCCATTCTGCCTACAATGATGAACA
GATACCATCAGATGATATTGCCCTGATCAAGCTGAAATACCCTATCGTCA
GCAATCGATACAATTTTGTACGACCCATCGAGATTGCTTTGTGGCGATTC
AAAGGTTCCGAAAGACACTCCATGCACTGCCAAGCTGCAGGTTGGGGAAA
AACCAAATCTTTCTCAAGTATTCAAGAAATGAATGACACAAAACATGAAC
CCTCGTTATCTCTTCAAAAAATCGACGTTCCATTACTGGGCAGGAACCAT
TGTATTTCTGAATTCGATAAAGAAAATGGCACAACGATGTTGAGCAACAA
GAATTTGTTTTGGGACAAAATGATGTGCGGTGGAAGTTCGAACCCGAATA
TAGGTTGGGGAAAAACCAAATCTTTCTCAAGTATTCAAGAAATGAATGAC
ACAAAACATGAACCCTCGTTATCTCTTCAAAAAATCGACGTTCCATTACT
GGGCAGGAACCATTGTATTTCTGAATTCGATAAAGAAAATGGCACAACGA
TGTTGAGCAACAAGAATTTGTTTTGGGACAAAATGATGTGCGGTGGAAGT
TCGAACCCGAATATAGGAACACCCTGCCTCTATGACTCTGGATCTCCTTT
AGTATGCGAAGATATCTACGGAAATCGTCAACTATACGGAATAGCTATTG
CAATACATGGACCGGAAATTAACGAGCGACCTTGCACACCCGGCAAACAA
ATCTCAGTTTTCCTTAGAGTACCACATTACGCTAAGTGGATTATTAAAAC
AACCAAAGATGCTCACGAAATAGATGAGAAATAGGAACACCCTGCCTCTA
TGACTCTGGATCTCCTTTAGTATGCGAAGATATCTACGGAAATCGTCAAC
TATACGGAATAGCTATTGCAATACATGGACCGGAAATTAACGAGCGACCT
TGCACACCCGGCAAACAAATCTCAGTTTTCCTTAGAGTACCACATTACGC
TAAGTGGATTATTAAAACAACCAAAGATGCTCACGAAATAGATGAGAAAT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000299_pilon | genome | sc0000299_pilon:152454..154882 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 736-951:2214 |
| Aaloc | 523-732:1581 |
| Aaloc | 292-519:769 |
| Aaloc | 85-288:268 |
| Aaloc | 1-81:1 |
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