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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:683218..686585+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034939 ID=XLOC_034939|Name=XLOC_034939|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3368bp|location=Sequence derived from alignment at sc0000100_pilon:683218..686585+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTAAAATCTCAAAGATAGCAGTTTTTGGAGCAAAATCTGTGGGTAA
AACATCCATTATTCAACAAATTGTTTATGGGAACTATTCTATTAATAAGG
TAAACattcaattttgtatttcttttttcaacttcatGCAATTGAAAGAA
AGACAAAATAGTATTGTTGATATCTTGTCAATCCTGAAATTTGAAAACCT
AAAATGCACTTCTTTCCATTTAGCTTTGTCGaatgatattttaaaaataa
tctttttacTACAATAAGGTAATAAGATAAATTGTTATTCATTCTTGTGT
GTCATTGTATGGTTTGGAATTGGAGAGGTTCTTTTTCACAgacgtttttt
taaataataagtTTCCCATAACATTTACTTCATAGATGATGTATCCAACA
ATAGCTGATAGTTATGATGCATGGGTAGATGCGGATCGTGgtcaaaaaga
aagaattcgAATATATGACTTACAAGGCCAGGTATCTCTACTGCAATAAT
TTTGTGTAGGGGATATATCAGGGATACTACAATCTTTGACTAAATATTCT
GGCAGAAATTCCTTTCCCTCCTTATATCAATGTTGACACATGGAAGGCTG
CCACCAGACGTACAAAATCCTCACATCAACACTAATATTAGGGGGAAGGG
ATTTTCTAAGAATTGGCCACAATTTAAGTCACATATTGTAGATTTAGCCA
aaggaatattttttatttaatacagCGAGGTTTTATACATGAAGTTGGct
tttttgttaaaatgttGATCTTTTTGCTTTACAGGATCCTGATCCTAACT
TCATCTCTCCATCTCATCATATTCAAATTGCTGATGTAAGCATTCTTTTC
AATTGTAATTTTTACACCAATTTTCTGTGATGGTGATCCtttttcaattt
atattttaattcaTATCTAGGGCCTTCTTTAAAATGTTAACATGAGATTA
AAAATCctctcaattatttttaatattcatcTATTATAAATGTATCCTAT
ATTCGAAAACTCTCCTTGTAttaactttattttcatttccagGCATTTAT
TTTGGTATTCAGTGTGACGTCCAAAACAAGTTTTAGTGTTGtggaaaaat
tgagaaaagaaaTCGTAATATGTAGAGGGAAAGATGTAAGTCTAGTAGTC
TATTTTTTATATCtctcagccaaaaaaaaaaactttatgtcTATACTTTA
GACGATACTATCATCTGATACACGTATCatctgatacacgttttttaaca
cccccttctcacagaaccgctaggatttttttcagctaGTAGGGATAAAA
ATAGCAGACTAAAACTCTATGGGGATTGAAATTTCCATGttttttttGGC
TGGGCCTCTACATTCCATTAtcttcaagtcaaaaaattcagtgggaatgg
gaAAAAGCATGGTATTTTGcattgaggattggtttatttgattcttttta
gtgggaacaaaaatttgagtaaaGTTTTCCACTGGGGGcggtattttggc
caatttttccagtgtgaacggctcccagtgggtctgtgagaaggggtgtt
ttTATCATGATCTGATCATTTCAGGCTTGAATATTCCCAAGTCTTTATCT
CAAAAGTATATTTATGTAGGTTAAACGTTCAATGTTTTGagttaaaaaac
atttcaatacTGTACACCAAGTGTCTTTATTATAAATTTAAGTTTGAATT
TGTAttgaataataaatttttttgcttgtcaTCCCCAGGTTCCAATAGTT
GTTTTGGGTACGAAAGTGGATATGTCAGAAACGCGGGAATGTCAACATAA
CGAAGTCATGAAGTGGGCTGACCATGAAAAAGGTTTGACTAGTTTTGTTT
TATGAGCTCCGGaattatacagggtgtcccggaAAAAAGCCTGTTTCAGA
ACGACTACAAGTAGTAAGACTTTTGTGTCTGTATGTCTAGTTTTTCTAGT
TACAATGAAACAGAAACGCAATAAACTTATAAACATGATCAAATTATCAA
TTGTGTAATAAAACATTTCAATGTCTCTTTCAAACAAAGTATGAAAAGAC
ATTAACGATcgcttttttctgggacaccctgtatatctCTAAGCAACTCC
AATTCCATAATAAGCACTGCCCGGCAGTGACAAATATCATATTTCTTATT
ACCCAACACGTCACTTACAAACAATCAATTTTATGAAAGTGTCATTGTAG
AGAATTAGAGATGCATATCATGATAAGAAATCACTTTCTGTATTTTATTC
GTTATCATGACAAATTTTAATTCATCCTTTCATTATTGATAGCTTGCAca
agaattaagaaaatttcactGACTAGATATAATGTTACGGGAGTATAATT
AATTACGGGAGTCTATTCTCCATATCAGACTCGACAATATCCATGTTcta
aaaaccttgaaatattGATTCAGAACCCAAGAATCCCGAACCTTGGCTGG
TATCTTCATAAAGTGTTCTGCTTAGTTAAAGCATAAGAACAGGTAGCAAG
CTATTTATCATTCGTTTTGTTTATCGGGAATTGTAACCCAAGAGCTTGAG
CACACTGTTCATGCAGTGAATCTGCAATctatagacgatatcggatttag
ataaatgcaatgcattctggtttctagggactctcaaaggaattataatC
TATTATAATTGATCTattataattcctttgagagtccctagaaaccagaa
tgcattgcatttatctaaatccgatatcgtctattggtaTTCAAGCCATC
TACTAAGTATCAGCGtatctaaatttttgatttgactATTGACTACTACC
CAAAATTTATTTATCTGAAAGACTTCACTTGATCTAAAATAAGTCTAATA
GGTCTACTATATAATATCAGCAGCTAAATAATTTCCGCATGCGATTATAA
AGTGTCCAATTTTAGAAAAggtttttgtatatatttatgTTTGATATGGA
GTATCATATATTTTATATGTTAGTGAAATTATTCGAAGTGTTCGTCGAAA
GTCGAACAACATTACAAGAACCAATCATGTATCTACTAAAGAAATTGCCC
TTATCTGCAGGTATGTTTTagaatactttttaaaataacaTTGCATCTTG
TAAATGTTAATTTGAAGATTGGACCAAACGAACTTATTTGTTCGAGTAAG
ATCAGAGAAGGTTCTACTACTAGTAAAATCGAGTGAAAAGGTGGTTCAGT
AAGTTCGATTTAGCAGAGATGGTTGATGATGTATCTAATAAAGTTTGTTT
TATAATCGTAACATATTTTTCTACTTTCTTTTTAGGGAAACGAGGTGCGG
ATGTTAAACAAAAGTTATTTGGGCGTGGTCAGAAATCGAAAGAGAGTAGT
ACTTCTTCTGAAtcgtga Coding sequence (CDS) from alignment at sc0000100_pilon:683218..686585+ >XLOC_034939 ID=XLOC_034939|Name=XLOC_034939|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1206bp|location=Sequence derived from alignment at sc0000100_pilon:683218..686585+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTAAAATCTCAAAGATAGCAGTTTTTGGAGCAAAATCTGTGGGTAA
AACATCCATTATTCAACAAATTGTTTATGGGAACTATTCTATTAATAAGA
TGCCTAAAATCTCAAAGATAGCAGTTTTTGGAGCAAAATCTGTGGGTAAA
ACATCCATTATTCAACAAATTGTTTATGGGAACTATTCTATTAATAAGAT
GATGTATCCAACAATAGCTGATAGTTATGATGCATGGGTAGATGCGGATC
GTGgtcaaaaagaaagaattcgAATATATGACTTACAAGGCCAGATGATG
TATCCAACAATAGCTGATAGTTATGATGCATGGGTAGATGCGGATCGTGg
tcaaaaagaaagaattcgAATATATGACTTACAAGGCCAGGATCCTGATC
CTAACTTCATCTCTCCATCTCATCATATTCAAATTGCTGATGATCCTGAT
CCTAACTTCATCTCTCCATCTCATCATATTCAAATTGCTGATGCATTTAT
TTTGGTATTCAGTGTGACGTCCAAAACAAGTTTTAGTGTTGtggaaaaat
tgagaaaagaaaTCGTAATATGTAGAGGGAAAGATGCATTTATTTTGGTA
TTCAGTGTGACGTCCAAAACAAGTTTTAGTGTTGtggaaaaattgagaaa
agaaaTCGTAATATGTAGAGGGAAAGATGTTCCAATAGTTGTTTTGGGTA
CGAAAGTGGATATGTCAGAAACGCGGGAATGTCAACATAACGAAGTCATG
AAGTGGGCTGACCATGAAAAAGGTTCCAATAGTTGTTTTGGGTACGAAAG
TGGATATGTCAGAAACGCGGGAATGTCAACATAACGAAGTCATGAAGTGG
GCTGACCATGAAAAAGTGAAATTATTCGAAGTGTTCGTCGAAAGTCGAAC
AACATTACAAGAACCAATCATGTATCTACTAAAGAAATTGCCCTTATCTG
CAGTGAAATTATTCGAAGTGTTCGTCGAAAGTCGAACAACATTACAAGAA
CCAATCATGTATCTACTAAAGAAATTGCCCTTATCTGCAGGGAAACGAGG
TGCGGATGTTAAACAAAAGTTATTTGGGCGTGGTCAGAAATCGAAAGAGA
GTAGTACTTCTTCTGAAtcgtgaGGAAACGAGGTGCGGATGTTAAACAAA
AGTTATTTGGGCGTGGTCAGAAATCGAAAGAGAGTAGTACTTCTTCTGAA
tcgtga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:683218..686585 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 523-603:3288 |
| Aaloc | 436-519:2976 |
| Aaloc | 340-432:1739 |
| Aaloc | 247-339:1043 |
| Aaloc | 196-246:785 |
| Aaloc | 100-195:386 |
| Aaloc | 1-99:1 |
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