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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000299_pilon:331219..334659+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034936 ID=XLOC_034936|Name=XLOC_034936|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3441bp|location=Sequence derived from alignment at sc0000299_pilon:331219..334659+ (Clytia hemisphaerica_ch_hm2_pilon)
atgcaAAACCTGCGAAGCTGTCTTTTTGTTTTCCTGGCATTTTGTTGTGG
AGTTTGTATGAATTCAAAACCAAATCTGCGATACACATCTTCGTCCGGTG
AAATCACTGCCAGGAGAAGAAGCTGGGATGGCGTGTATAGTCAGATGGAC
GAATGGCACACAATAGAACCTACCAATAAAGGCAAAGTGTTTACTATTTT
AAAATGGAAGAAATTCAATATTAAAGACACGTTACCGTATTGTCGAGTGG
TTTTCGTCAATGTTTATGTTGGGTAAGTAATATGgatgtttgttttgttc
ttactttcagacgttacggtttcgttcCATTCCGAAACGatacggttccg
aaacaagtgttaacgtcaaaattcgaagcgtcaaaaaagaagacgttaca
aagcaaaacagatcaatctgccaattagatttttaaaataagTTTTGAGA
GCTTTTATGTAACTTTTCGGGCCTTCCATATTTAGCTGTCAATTAATTAG
TAAATATGACTAATCATTGTTTTTCGCTATCATTTTCCATCATTATAGAT
GTGGTAGTTCTAGTCATTTTGTCGGTGGATTCTGTGGTAGAACGCCGTTC
CCTATTTATTCACCTGATGGTTGCATCAAGATCAACTACCAAGATAAATC
ATCCAGACATTCCTACTTCTCCGGTTTCGAAGCTGTGTATGAAACATACC
CTGTGGAGAACAGCCATTTCTCCTCGTGTTATCCGTACGTATTGAATTAC
ATGTGAAATTTAATTTCCTTAAAAAACTAATacaatttttaccaattttc
agTTCAAAGTCGGGTTTGAGTGATTGatagtgactaaatttttgaACTAA
TTCGAGGCTTTTCAATGAGATTCAATGATTGCTATTGTCATAATTTTGAA
CACCGTTTCACAGACCCGctgccccactgaaaaatttggccaaagTTTGT
CCCAGATGAGAGAATTATTTGAAGTTCAAGGAAAACGTTTCCCTCCAAAA
CCATCACCACTGGATTTTTCAACTTAGCAacaatttctattcccattgag
ATTGTaatagaaaatttcatcactACTGTGGAAAAGAGTATTCTCGCCGG
GATTTTGAGACATAGGtgtttttcaggaaattttgaaGGGTATTCAGGTC
TACCTTTGGacatttaaattagaaaataacTGTTTCATTTTTTCCCAGTA
AAAACTGAGAAGTTCATTCTTCTTTagaaaatcaacaaagattACACAAC
GAGCTGGACTTATTGGTTCACCCAACTGGCCACATTCGTATAATAGAGTT
AAAGATTTCCGTAACACGAACCAGTGTACATGGGAGATTTACGTACCAGG
CGCAAAAAATATCGCTGTTTACGTCATCGATTTGAATCTGGCGAAAGATT
ACAATGTTGTTGATAATAGTTGTCCGAATAGAAAATATGACTATTTTTCA
ATCCACTACAAAAGTAAGAatttacacccctgtttcactgcCTTCCGAAA
TtattttgtaaaccatatacattttcaaattcataatttttccaTAGTCG
AAAATTAGGTCATGTTAATAATATCCACAATCTTACGTTTGTATCGCTTg
gctattttcaaaaaaaatacttctTCAAACTTGGAAATTctattgatttt
tgatttcagaGAAAACTGCGTATGACTTGGAATCCAAGACCAGCTATTAT
TGCGATAAAACTCAAGGCTATAATTTGGATACACAAAGCAATTCTTTGAA
ATTGAGGTTTAATAGAAATTCTAGAAACTTTTATCCCCAACGAACTCGTT
TTTTGATTGGTTACATTGCGTATGGTGGTGAGTTGATCTATTTTTTATTC
TCCCTCACCTTAGGTTCCTAATCGCACTTTCCCTCAACATTTAAAATACA
AACTTAGAGTACatcatttctaaatttaaacATCTCTCTTCCTTAAGCAT
CGCTAAACATCTCTCTTCACTATTTTGCGAAAATGATACTTGCAAGCATA
GAAAAATCGACGAATTAACTTAAGATTGGCGAGAGTCTCTCGAACATtgc
aaaaagttaagagcaatATAGTTTTCTGATAGAGATGAAATTCCAAAGTA
ATTTTCTCACCAGCATCGATTTTCTGAAAGTTAGGATGAGTTTCGCTTGG
TTATCGTGTTACACAAAAATGACAGactcataaaacctatacttttacAG
ACCAACCAATCGCAGAGAAGAAGGAATCCGATCGGACCTCCATAATCCTG
AGCATTATTATCAGTGCAGTCATCATTTTCGTTATCCTGATCTTAGCATG
GAAGTTTTGCAATTGTTCCAACCGATGCAAACCGTTTGGTGGTTCTGACT
GCCCGGCTGAGGTATGACGGATCTTTTCTTACACGTTTGCCAATATTTTT
ACAGGACTTTAACAAGGTATATTTCAATTTCACTTAAATTCCTTCATTCT
GACAtggataaaaatttgattttattaaattgATTTAACGAGATGAATAT
GTCAAAAGAGTATTCAAGAAGTTTCATAATAAAGTTTATATATTCAAAAT
TATTGCAAATATTCTAAGAGGAGTAGCAACCTTCTCTAGGGTCAAATAGG
ATTTAAATACCAGAGCATATATCCAGGTGACCGAATCGTGGCagcaaaat
tatgaaaatgccTCATATATTTCTATGAATACTTCTCACAACAGGTAGCT
GCAGAGGAGCGACATAATTTGAGGAATGGTCCTTACATGCTTGAGTCAAG
TTTCCCGAACAACAATGAAATTCCAAGGATTGAAGAAACAAGACTCCCTG
ATCAAGAAATCCTTAACGACCCATCACTTTCAGGTATTTTTCTTGTgaac
tttaaatctttttcACCTTAAATTAACCCAGCTTAAAATTATGCGGAGCC
TCAAGGATTTATTTTTAAGATTCAAAGCATGGAGTCAAACCATTACGTAT
GTGATGCCCgctaaattttggaaattaagAGTCTAAATCAGTGGCGTCGC
ATCTTGACCAAGACTGGGATATAAGGCAAAGTATAGAGAAATTCCAATTT
AACCATTTGTGCGATAGAATCGCATCTGGTACACCTGGTTTTCGATATTA
CCACCCTCGACGTCGAAGTGCCCCCTGGCACTTGTTGCCCTAAGTTCTAC
TGTGAAGCAATGCGTACACAACGCCCTATAACGAGTATGTTTTTGCGCCT
TTTTGCTGTGACACTTGCGAAAATCCGTTTCAATATTAACCATTGTCCAT
TGTCTAACTATgcattttgtcttatttcagATCTGCCACCACCAACATAC
GCACAAGGTTTGAGAATGCCATCTCCTGCAACGTCAATGAATCGATTGAA
TTCCACTGATGTTGAGGATGGCGATCAAAACAAACTTCCATCATACCAAG
ATGTCATTAGTAATAGTAATAGCAGGTTGCATTTGACATGA Coding sequence (CDS) from alignment at sc0000299_pilon:331219..334659+ >XLOC_034936 ID=XLOC_034936|Name=XLOC_034936|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2646bp|location=Sequence derived from alignment at sc0000299_pilon:331219..334659+ (Clytia hemisphaerica_ch_hm2_pilon)
atgcaAAACCTGCGAAGCTGTCTTTTTGTTTTCCTGGCATTTTGTTGTGG
AGTTTGTATGAATTCAAAACCAAATCTGCGATACACATCTTCGTCCGGTG
AAATCACTGCCAGGAGAAGAAGCTGGGATGGCGTGTATAGTCAGATGGAC
GAATGGCACACAATAGAACCTACCAATAAAGGCAAAGTGTTTACTATTTT
AAAATGGAAGAAATTCAATATTAAAGACACGTTACCGTATTGTCGAGTGG
TTTTCGTCAATGTTTATGTTGGatgcaAAACCTGCGAAGCTGTCTTTTTG
TTTTCCTGGCATTTTGTTGTGGAGTTTGTATGAATTCAAAACCAAATCTG
CGATACACATCTTCGTCCGGTGAAATCACTGCCAGGAGAAGAAGCTGGGA
TGGCGTGTATAGTCAGATGGACGAATGGCACACAATAGAACCTACCAATA
AAGGCAAAGTGTTTACTATTTTAAAATGGAAGAAATTCAATATTAAAGAC
ACGTTACCGTATTGTCGAGTGGTTTTCGTCAATGTTTATGTTGGATGTGG
TAGTTCTAGTCATTTTGTCGGTGGATTCTGTGGTAGAACGCCGTTCCCTA
TTTATTCACCTGATGGTTGCATCAAGATCAACTACCAAGATAAATCATCC
AGACATTCCTACTTCTCCGGTTTCGAAGCTGTGTATGAAACATACCCTGT
GGAGAACAGCCATTTCTCCTCGTGTTATCCATGTGGTAGTTCTAGTCATT
TTGTCGGTGGATTCTGTGGTAGAACGCCGTTCCCTATTTATTCACCTGAT
GGTTGCATCAAGATCAACTACCAAGATAAATCATCCAGACATTCCTACTT
CTCCGGTTTCGAAGCTGTGTATGAAACATACCCTGTGGAGAACAGCCATT
TCTCCTCGTGTTATCCaaaatcaacaaagattACACAACGAGCTGGACTT
ATTGGTTCACCCAACTGGCCACATTCGTATAATAGAGTTAAAGATTTCCG
TAACACGAACCAGTGTACATGGGAGATTTACGTACCAGGCGCAAAAAATA
TCGCTGTTTACGTCATCGATTTGAATCTGGCGAAAGATTACAATGTTGTT
GATAATAGTTGTCCGAATAGAAAATATGACTATTTTTCAATCCACTACAA
AAaaaatcaacaaagattACACAACGAGCTGGACTTATTGGTTCACCCAA
CTGGCCACATTCGTATAATAGAGTTAAAGATTTCCGTAACACGAACCAGT
GTACATGGGAGATTTACGTACCAGGCGCAAAAAATATCGCTGTTTACGTC
ATCGATTTGAATCTGGCGAAAGATTACAATGTTGTTGATAATAGTTGTCC
GAATAGAAAATATGACTATTTTTCAATCCACTACAAAAaGAAAACTGCGT
ATGACTTGGAATCCAAGACCAGCTATTATTGCGATAAAACTCAAGGCTAT
AATTTGGATACACAAAGCAATTCTTTGAAATTGAGGTTTAATAGAAATTC
TAGAAACTTTTATCCCCAACGAACTCGTTTTTTGATTGGTTACATTGCGT
ATGGTGaGAAAACTGCGTATGACTTGGAATCCAAGACCAGCTATTATTGC
GATAAAACTCAAGGCTATAATTTGGATACACAAAGCAATTCTTTGAAATT
GAGGTTTAATAGAAATTCTAGAAACTTTTATCCCCAACGAACTCGTTTTT
TGATTGGTTACATTGCGTATGGTGACCAACCAATCGCAGAGAAGAAGGAA
TCCGATCGGACCTCCATAATCCTGAGCATTATTATCAGTGCAGTCATCAT
TTTCGTTATCCTGATCTTAGCATGGAAGTTTTGCAATTGTTCCAACCGAT
GCAAACCGTTTGGTGGTTCTGACTGCCCGGCTGAGACCAACCAATCGCAG
AGAAGAAGGAATCCGATCGGACCTCCATAATCCTGAGCATTATTATCAGT
GCAGTCATCATTTTCGTTATCCTGATCTTAGCATGGAAGTTTTGCAATTG
TTCCAACCGATGCAAACCGTTTGGTGGTTCTGACTGCCCGGCTGAGGTAG
CTGCAGAGGAGCGACATAATTTGAGGAATGGTCCTTACATGCTTGAGTCA
AGTTTCCCGAACAACAATGAAATTCCAAGGATTGAAGAAACAAGACTCCC
TGATCAAGAAATCCTTAACGACCCATCACTTTCAGGTAGCTGCAGAGGAG
CGACATAATTTGAGGAATGGTCCTTACATGCTTGAGTCAAGTTTCCCGAA
CAACAATGAAATTCCAAGGATTGAAGAAACAAGACTCCCTGATCAAGAAA
TCCTTAACGACCCATCACTTTCAGATCTGCCACCACCAACATACGCACAA
GGTTTGAGAATGCCATCTCCTGCAACGTCAATGAATCGATTGAATTCCAC
TGATGTTGAGGATGGCGATCAAAACAAACTTCCATCATACCAAGATGTCA
TTAGTAATAGTAATAGCAGGTTGCATTTGACATGAATCTGCCACCACCAA
CATACGCACAAGGTTTGAGAATGCCATCTCCTGCAACGTCAATGAATCGA
TTGAATTCCACTGATGTTGAGGATGGCGATCAAAACAAACTTCCATCATA
CCAAGATGTCATTAGTAATAGTAATAGCAGGTTGCATTTGACATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000299_pilon | genome | sc0000299_pilon:331219..334659 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1174-1332:3283 |
| Aaloc | 1033-1170:2695 |
| Aaloc | 874-1032:2203 |
| Aaloc | 706-870:1662 |
| Aaloc | 469-702:1229 |
| Aaloc | 439-465:706 |
| Aaloc | 274-429:550 |
| Aaloc | 1-270:1 |
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