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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000230_pilon:415645..419646+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034926 ID=XLOC_034926|Name=XLOC_034926|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4002bp|location=Sequence derived from alignment at sc0000230_pilon:415645..419646+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGGGCAAATTGAATAAGATGGTCACTGGAGACCAGGAAAAAATCCA
GAGCTTGGAAGAAGCACTTGAGATGGAGCAGCAACGTAACAAAATTGCTC
AAGATCAATTTAGAAAGCTtttgaaagagaaagaaaaacagaTCCAGAAG
TTACAAGTTCAAGGTGGTGGAGGTGGAGCAGGTGCTGCAAGTAATGGTGC
TACTGATGTAAGCGAtatgtattttttcaaaaacaataattCAACTGCCA
AATTTTCTCTATTTAGAACTGCCCTGTAAAGAATACTGGACTTAATCCTA
AGATAAAAAACTTGACACGCAATAAGTGCTTCTTTGAATTCCATAGATTT
ACTAGCAATAATCTGAAGTTCAGTTGGAGGTTTATCTTAGAAGCTTGTTA
AAAGGAAAATATGGCTATGAAAAGAAACTTGTGAAATTTTTAGGTATTAA
AAAGTCACAAATATCATCGCTGTTAGTAAGAAAAGCTGTGCTCTTTGTTT
AAACTCAGGTCTGtgatttaaagaaatattttgaattttataaagGACGC
CACACCTGAAAACTAGATGATagaaattacttttgtcaaatTGTAGGACC
GTGAAGAGATCAAAGAAGAATTGGGACGTTTGCAAAGAAAAATGGAAGAA
TATCAAATGCTTATCCAgcaaaaagatgaaaatattcAAGTACTCATGCA
ACAAACACGAGAAGCAGAAGAGCTGAAAGAAAAAGTAGAAGCCCAGGAAA
GAATCAATTCTGAAAAGCTGATGTTCGAGCTGGCTGGAAGAATTGAATCT
CATGAAAAAATATCTGTCAAACTAGAGGAAATGAAACAAGTTTTGGAACA
AAGAGATCTTACTGTTCTAAACATTGCTGATGATGTACGTTGCTGAATTT
ATTTTAATTGGAAATTTCACCAGCTTTCACTTGAATTAATCAAGACTCAT
GCTTATCTCTTTATTGGTTTGAGAGGTTAAAAAACATTGTATTAAGAATG
CAAACTTCTCTCTTTCAGGTTGCTGCCAAAGACAAGCTTGTAAAAACAAA
GGATGAGGCAATTCGTCAGTTGAAAAAGCTGATGCAAGGTGATGAAGCTG
TAGAGGAACTTAAATCAATGATTTTATCACAGGAAGAAAATGAGTGTGAA
ATCATTACTCTTCAACAGACCATTGCTTCTCTTGATAGAGAAAAGAAATA
TCTTGAGATGCGACTTTTAAATCCTGATGGAGAAGAAAATGAGGTACTTT
TCCTTTCTTTGGCAATATCAATTATTAAACCTGTGTTTAGTAGCAATGCC
TGAACTAATCTGGTGGTTATTAACTTGTTTGTTAACTTGTTTTTCCCCAA
AGCATTAATGGCAGTTTTTAATTTGTACATAAAATTGATGCCTCTTCAAT
ATAgcaatatataatatattttcaaagtttatttcaaagtaaaagctttt
cggCTACGCAATCGTCAGTACAAATGTAGAATAtgttttgaattctatgt
ttgtACTGACGATGACGTAGCCAATAAGCttttactttgaaataaatttt
tattttttaataaaactatgGCGAATAGATTTAACAGTATATTTTCAATC
AATGAACCATAAAACCAGACGCATTggtaaaaaagaaatctttctcTTAA
TGAAGTATGTTTTCGATATATAATCCTTCTTGTTTTATAGCCTGTCATTA
TGTAAAAAGCAATGGCAAAATGCATATCATAAAAACTTGTACAAGGTGTA
CCAAAAGTCAACccacttttaaaaaatctttcctCCTTTTAGACATTTTC
ATCCAATGAACTGAAAGAAAGAGATTCACTGATCGAGAATCTACAGAAGG
AGAAGAAAGCCGTTGAAAACGAGCTGGAGTCTTTAAAGAAACACAGTGGA
AGTGCTGAAAAACTTGAAGAGCAGGTATTCTACTTCATTATTATCATTGG
CTACAGTTTGATTTTGTAACTGGTCACTTCTCTCTCTCTTCTTCCAGATG
ATGAATTATTGACTTTTTATCAACCATTCCTTTTGAATTCCTTCCTTTAG
GATAAGGTCATTGCTGATCTACAAGACTTGGTCAACAAACTCGAAGGCGA
ATCAACATCATTGAATACCAAAGTTGAAGAagctgaaaaatctttttctg
agCTTGAGGCTGTTCTCAAGGCTTCTGAAGAGCTTTGTGAGAATCTAAAA
GCTGAGAAAAATGATCTTCAAGAGGTAATCTTACAAACATCTTTAAATTT
TGTGAAGCTAAAAAGCTTTGATTGCAAGTGAGACACAGATGGGCCAGACC
AAGGGTATATTTTGTGTAAGTCACAGTCAGTTGAAAAGGTGGGGAATTTA
ATAATGGGCATCTTTAATCATGGGcatctttaaaaaaactaaacccAAAG
TTCTCTTATATTTATTTGCATTTACTTTAGCCTGAATTTTCTAAGAGGAA
TAACTCATaattgaatttctattttcaaggCATTGGAGTCAAAATCCAAG
GAGCTTGAAAATTCTGTAGagaatttgcagaaaaaagaGCAAGAGTTGAG
CCACAAGGATTCAGATTTGAAAGCAAAAGAAGAAGAATCTAAGAAACTTG
GAGAAAAATGTGAAGAATTGACCAGGACAAATGACTTACTTCAAAAAGAA
GTTGATAAATTGGATAAACTGGATGAAACAcaggtttgtttttcttctac
TTAAGGAAAGAAGCTCTCCAAGGTTTTGCTTATTAAACGAtacaattttc
ataatttttactAAAGACTTAAATTGGTTCTAAATAAATGTGTTTTCTAG
AAAATGTACAACTTATGATTTCTTCAAAATatgagataatttttttttct
ttgaaattttcattatagGAGGAGAACGAAAAAGTCAAAAGCCAGTTATC
AGAAAAAGATGAATTAATCCAACAAAAAGACGAACAAATTGAAGAACTCC
AAACAGCTTTAACTCGAAGTGAAGAGGACAAGGAAGACTTGGCACAGCGA
CAGGCTTTGGACATTGAAGAACTACAAAACGCTATGGATGTTATGGAAAC
TGAAAAAGCAAATGCAAATGAAGACCTCAAAGATGTACAAGATCAAATGG
AAACTTTGAGAAGCCAGCTAGCAAATAACGATGAAAGTAGTGGTGTTCTT
GTGAAACATTTAGAAGAAAAGGATGCTGAAATAAGTAATTTGAAGAAAGA
TTCCGCAGAGCTTACGGAACAAaaagaaacacttgagaaacacttagaag
aacaaaaacaaaagctttCCTTACTGAGACAAGAAATGGATTTGAAGGAT
ACTGATTCAAAAGTTGTAAGTGAGCAGTTGTCTCAAAACGCTGCAGAAAT
TGATAAACTCAACTCGTCACTTACCACTGTGGAAAACGAGAAAAACGAGA
GcatacaaaatttacaaaaagagAATGAATCCTTAGAGAATAATATTATA
ACATTAGCAGAAAATGTTAAAACTCTTGAAAGCAATATTGAAGCTCTTGA
AAGTGAAAAGcaaacttttacaaaatctaTAGAAACTAAGGATACTGAAA
TTTCTTCATTAAAATCGAACATTGAATCACTTGAAATGGACAATAATACC
ACAAAAGAAGCACTCAATACTTCCCATAAAGAACTGTCAGAGATCAGAAA
ACAAATGGAATCAAAGGATGGTGATAGTAACATTCTAAGTAAACAAttag
aggaaaaagaaaacaaactttCAGAACTTACAAAAGAGAACGATGTTTTG
AGTAAAACAGTGAGTGACTTAGAAGCCACGATAATCAAACTAGACGAAGA
TATTGTTGTATCTCAAAAAGCAGCAGAAACCTCTCTCCATCGGCAAAAAG
AATTAGAAGTTTCACTGAAGACATTGTCTGACGAGAAGGATGGCTTCGAA
AGCAAATTGCAAGAGATGGGTCAAGCACTGGATGATTTTGTTCAATCAAC
TGAAACGCGAATTAGAAGCAGTAATGGTAGTGATGTTGAATCGAATGCAT
GT Coding sequence (CDS) from alignment at sc0000230_pilon:415645..419646+ >XLOC_034926 ID=XLOC_034926|Name=XLOC_034926|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4728bp|location=Sequence derived from alignment at sc0000230_pilon:415645..419646+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGGGCAAATTGAATAAGATGGTCACTGGAGACCAGGAAAAAATCCA
GAGCTTGGAAGAAGCACTTGAGATGGAGCAGCAACGTAACAAAATTGCTC
AAGATCAATTTAGAAAGCTtttgaaagagaaagaaaaacagaTCCAGAAG
TTACAAGTTCAAGGTGGTGGAGGTGGAGCAGGTGCTGCAAGTAATGGTGC
TACTGATATGTGGGGCAAATTGAATAAGATGGTCACTGGAGACCAGGAAA
AAATCCAGAGCTTGGAAGAAGCACTTGAGATGGAGCAGCAACGTAACAAA
ATTGCTCAAGATCAATTTAGAAAGCTtttgaaagagaaagaaaaacagaT
CCAGAAGTTACAAGTTCAAGGTGGTGGAGGTGGAGCAGGTGCTGCAAGTA
ATGGTGCTACTGATGACCGTGAAGAGATCAAAGAAGAATTGGGACGTTTG
CAAAGAAAAATGGAAGAATATCAAATGCTTATCCAgcaaaaagatgaaaa
tattcAAGTACTCATGCAACAAACACGAGAAGCAGAAGAGCTGAAAGAAA
AAGTAGAAGCCCAGGAAAGAATCAATTCTGAAAAGCTGATGTTCGAGCTG
GCTGGAAGAATTGAATCTCATGAAAAAATATCTGTCAAACTAGAGGAAAT
GAAACAAGTTTTGGAACAAAGAGATCTTACTGTTCTAAACATTGCTGATG
ATGACCGTGAAGAGATCAAAGAAGAATTGGGACGTTTGCAAAGAAAAATG
GAAGAATATCAAATGCTTATCCAgcaaaaagatgaaaatattcAAGTACT
CATGCAACAAACACGAGAAGCAGAAGAGCTGAAAGAAAAAGTAGAAGCCC
AGGAAAGAATCAATTCTGAAAAGCTGATGTTCGAGCTGGCTGGAAGAATT
GAATCTCATGAAAAAATATCTGTCAAACTAGAGGAAATGAAACAAGTTTT
GGAACAAAGAGATCTTACTGTTCTAAACATTGCTGATGATGTTGCTGCCA
AAGACAAGCTTGTAAAAACAAAGGATGAGGCAATTCGTCAGTTGAAAAAG
CTGATGCAAGGTGATGAAGCTGTAGAGGAACTTAAATCAATGATTTTATC
ACAGGAAGAAAATGAGTGTGAAATCATTACTCTTCAACAGACCATTGCTT
CTCTTGATAGAGAAAAGAAATATCTTGAGATGCGACTTTTAAATCCTGAT
GGAGAAGAAAATGAGGTTGCTGCCAAAGACAAGCTTGTAAAAACAAAGGA
TGAGGCAATTCGTCAGTTGAAAAAGCTGATGCAAGGTGATGAAGCTGTAG
AGGAACTTAAATCAATGATTTTATCACAGGAAGAAAATGAGTGTGAAATC
ATTACTCTTCAACAGACCATTGCTTCTCTTGATAGAGAAAAGAAATATCT
TGAGATGCGACTTTTAAATCCTGATGGAGAAGAAAATGAGACATTTTCAT
CCAATGAACTGAAAGAAAGAGATTCACTGATCGAGAATCTACAGAAGGAG
AAGAAAGCCGTTGAAAACGAGCTGGAGTCTTTAAAGAAACACAGTGGAAG
TGCTGAAAAACTTGAAGAGCAGACATTTTCATCCAATGAACTGAAAGAAA
GAGATTCACTGATCGAGAATCTACAGAAGGAGAAGAAAGCCGTTGAAAAC
GAGCTGGAGTCTTTAAAGAAACACAGTGGAAGTGCTGAAAAACTTGAAGA
GCAGGATAAGGTCATTGCTGATCTACAAGACTTGGTCAACAAACTCGAAG
GCGAATCAACATCATTGAATACCAAAGTTGAAGAagctgaaaaatctttt
tctgagCTTGAGGCTGTTCTCAAGGCTTCTGAAGAGCTTTGTGAGAATCT
AAAAGCTGAGAAAAATGATCTTCAAGAGGATAAGGTCATTGCTGATCTAC
AAGACTTGGTCAACAAACTCGAAGGCGAATCAACATCATTGAATACCAAA
GTTGAAGAagctgaaaaatctttttctgagCTTGAGGCTGTTCTCAAGGC
TTCTGAAGAGCTTTGTGAGAATCTAAAAGCTGAGAAAAATGATCTTCAAG
AGgCATTGGAGTCAAAATCCAAGGAGCTTGAAAATTCTGTAGagaatttg
cagaaaaaagaGCAAGAGTTGAGCCACAAGGATTCAGATTTGAAAGCAAA
AGAAGAAGAATCTAAGAAACTTGGAGAAAAATGTGAAGAATTGACCAGGA
CAAATGACTTACTTCAAAAAGAAGTTGATAAATTGGATAAACTGGATGAA
ACAcaggCATTGGAGTCAAAATCCAAGGAGCTTGAAAATTCTGTAGagaa
tttgcagaaaaaagaGCAAGAGTTGAGCCACAAGGATTCAGATTTGAAAG
CAAAAGAAGAAGAATCTAAGAAACTTGGAGAAAAATGTGAAGAATTGACC
AGGACAAATGACTTACTTCAAAAAGAAGTTGATAAATTGGATAAACTGGA
TGAAACAcagGAGGAGAACGAAAAAGTCAAAAGCCAGTTATCAGAAAAAG
ATGAATTAATCCAACAAAAAGACGAACAAATTGAAGAACTCCAAACAGCT
TTAACTCGAAGTGAAGAGGACAAGGAAGACTTGGCACAGCGACAGGCTTT
GGACATTGAAGAACTACAAAACGCTATGGATGTTATGGAAACTGAAAAAG
CAAATGCAAATGAAGACCTCAAAGATGTACAAGATCAAATGGAAACTTTG
AGAAGCCAGCTAGCAAATAACGATGAAAGTAGTGGTGTTCTTGTGAAACA
TTTAGAAGAAAAGGATGCTGAAATAAGTAATTTGAAGAAAGATTCCGCAG
AGCTTACGGAACAAaaagaaacacttgagaaacacttagaagaacaaaaa
caaaagctttCCTTACTGAGACAAGAAATGGATTTGAAGGATACTGATTC
AAAAGTTGTAAGTGAGCAGTTGTCTCAAAACGCTGCAGAAATTGATAAAC
TCAACTCGTCACTTACCACTGTGGAAAACGAGAAAAACGAGAGcatacaa
aatttacaaaaagagAATGAATCCTTAGAGAATAATATTATAACATTAGC
AGAAAATGTTAAAACTCTTGAAAGCAATATTGAAGCTCTTGAAAGTGAAA
AGcaaacttttacaaaatctaTAGAAACTAAGGATACTGAAATTTCTTCA
TTAAAATCGAACATTGAATCACTTGAAATGGACAATAATACCACAAAAGA
AGCACTCAATACTTCCCATAAAGAACTGTCAGAGATCAGAAAACAAATGG
AATCAAAGGATGGTGATAGTAACATTCTAAGTAAACAAttagaggaaaaa
gaaaacaaactttCAGAACTTACAAAAGAGAACGATGTTTTGAGTAAAAC
AGTGAGTGACTTAGAAGCCACGATAATCAAACTAGACGAAGATATTGTTG
TATCTCAAAAAGCAGCAGAAACCTCTCTCCATCGGCAAAAAGAATTAGAA
GTTTCACTGAAGACATTGTCTGACGAGAAGGATGGCTTCGAAAGCAAATT
GCAAGAGATGGGTCAAGCACTGGATGATTTTGTTCAATCAACTGAAACGC
GAATTAGAAGCAGTAATGGTAGTGATGTTGAATCGAATGCATGTGAGGAG
AACGAAAAAGTCAAAAGCCAGTTATCAGAAAAAGATGAATTAATCCAACA
AAAAGACGAACAAATTGAAGAACTCCAAACAGCTTTAACTCGAAGTGAAG
AGGACAAGGAAGACTTGGCACAGCGACAGGCTTTGGACATTGAAGAACTA
CAAAACGCTATGGATGTTATGGAAACTGAAAAAGCAAATGCAAATGAAGA
CCTCAAAGATGTACAAGATCAAATGGAAACTTTGAGAAGCCAGCTAGCAA
ATAACGATGAAAGTAGTGGTGTTCTTGTGAAACATTTAGAAGAAAAGGAT
GCTGAAATAAGTAATTTGAAGAAAGATTCCGCAGAGCTTACGGAACAAaa
agaaacacttgagaaacacttagaagaacaaaaacaaaagctttCCTTAC
TGAGACAAGAAATGGATTTGAAGGATACTGATTCAAAAGTTGTAAGTGAG
CAGTTGTCTCAAAACGCTGCAGAAATTGATAAACTCAACTCGTCACTTAC
CACTGTGGAAAACGAGAAAAACGAGAGcatacaaaatttacaaaaagagA
ATGAATCCTTAGAGAATAATATTATAACATTAGCAGAAAATGTTAAAACT
CTTGAAAGCAATATTGAAGCTCTTGAAAGTGAAAAGcaaacttttacaaa
atctaTAGAAACTAAGGATACTGAAATTTCTTCATTAAAATCGAACATTG
AATCACTTGAAATGGACAATAATACCACAAAAGAAGCACTCAATACTTCC
CATAAAGAACTGTCAGAGATCAGAAAACAAATGGAATCAAAGGATGGTGA
TAGTAACATTCTAAGTAAACAAttagaggaaaaagaaaacaaactttCAG
AACTTACAAAAGAGAACGATGTTTTGAGTAAAACAGTGAGTGACTTAGAA
GCCACGATAATCAAACTAGACGAAGATATTGTTGTATCTCAAAAAGCAGC
AGAAACCTCTCTCCATCGGCAAAAAGAATTAGAAGTTTCACTGAAGACAT
TGTCTGACGAGAAGGATGGCTTCGAAAGCAAATTGCAAGAGATGGGTCAA
GCACTGGATGATTTTGTTCAATCAACTGAAACGCGAATTAGAAGCAGTAA
TGGTAGTGATGTTGAATCGAATGCATGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000230_pilon | genome | sc0000230_pilon:415645..419646 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1231-2364:2869 |
| Aaloc | 1027-1230:2480 |
| Aaloc | 853-1026:2051 |
| Aaloc | 721-852:1793 |
| Aaloc | 496-720:1019 |
| Aaloc | 208-495:597 |
| Aaloc | 1-207:1 |
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