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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:273636..275896- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034912 ID=XLOC_034912|Name=XLOC_034912|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2261bp|location=Sequence derived from alignment at sc0000100_pilon:273636..275896- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTTTCACAATGCCATCTCAGGTGAAAAATATTCCTACTTAATGCA
CTACTTTCGATCGGACATTACTAAATGACTGATAGTACCTTATTCAGGAT
ATGAGATACACGTAGAACACTTTTTTTTATTTCCTTCAGTGATATGTCAA
TATCTTCTAAATGCATTTCATGTAGATAAGTGGTTTAGATTTTGAACTTT
GCTTCTTTTTCATTTTCAGGAACTCCTGGCATCATTTTGATAGTTGTGAT
TTCGTTCGTTTTGATCCTGCTCATTTGTGCTGCTCTTTATCTCCTCAAAA
ACAAAAAAACAAAGAACGTCCGACAGTCGATCTTTGATCACGAAAAACAA
ATAAAGTACGGTATACTAGACTATCCGCAGTCTGGAACTCCAGAATTTCA
TCCAAACCCGATCCAGCCCCCTTATCAAACGAAAGTGAAAGTGAAGCTAA
TACCTAATAATGCGAAAACAAAGACGTCTTTAAAATACACAGAACTCGGC
GAAGGTGTTGAAGAAGCTCAGGAGGACCATAAAATTTTGGATGACCTCTC
CAGTGGAGAGCACTCACCCAATCAAAAAGATTTCCGCAGGTCTGTACATC
TTTATAAAGATAAAATCACAAACTTTATTTCCAAATATCGTGATGATCAT
GATTTATCGTCTTTACCACAAAATGATACGGAACGCAGGATCTGGCAACC
GGAACCAGTTGCGGTCAATCAAACACATCGTTTACAAAGACCAGATAGTG
TTCTTTCCAATGAACAAGAAATGAGTTTAGGACGGTTAACTTTTACCATG
TATTACCTACCTGGTGATGAATATTTAACTTTACTTTTGATATCTGGTCG
ACAATTGAACTCCTGTGATTCCTTATATAACATTCGTTTGCCAGCTGTCA
GTATCGTCATCGAAAATAATCCCAATACCGAAGTCACTTCAAACCCGGAT
GAAGCACCTAATCCGGAGTATGACCAAGAATTCACTTTCACTATCCGCTC
AAAAGAACTTTTCGATGTGGTATTACGATTTACTGTTTGGGATATTATAT
CGAATAACGAAACCAGAGTGCTTGGCTTTTTTCGTGTACCTTTAGCACAA
TACCAAAAGACTCTGTTAGCTGGTTCTGATACAGGACCGATTTGTCGTGA
AATACAACCCTGTCTCAATCCTGTAAGTCTAACACGAATTTCTCACTCAA
GGTTGAAATAATGAGTTTTCAAGAGATTAATAGCTCCATATTTCTCGCTA
TAAATCATCCCGTTGATGGATGGTAGAAGATGAAGGAAAAGATTAGGAGA
TTCAAACAAACCTCAAAGGTCGAACCAATCATCGGATTAACACCTTTCTT
TTCCTAAGCTAATGTGGATTTTTTTCTTCCCTCTCGAATGTGTTACGAAT
CTAACCTGTTCTGTAAAATCTTAGAAAAGTACTTTTGTAAGCTCTCCCAG
GATATAAACATCATATTTTTTTAATAACTGGTCCTTCTTTCTTTGATTAT
TTCAGCCTTCTATGGTACTTGGTCAATTACTGATTTCTCTACTTTACGAT
TGCGTGACTGACAAAATCTTTGTCACTGTGCGACAATTTCATCAATTATC
TGTTTCCAAAGATGATCTAGGTATGTTGTATAATCAAGGATAGTGAGTTT
GAATTATTTCCGTTTAGTCATATGAAATTCTGGCGTGACTTTTAGCCCCT
TTACTTAAAAAAATCGCTATCAAGTTAAACTAGTTTAATGTAACATTCTT
ACTGTTACCATTCTGTTAGATTCTCGGAAAGAACCCCCTTAATGCCATTG
GTTGAAACCTGCGACTCACTACATGTTTACTATTTTGGTATTTTCTTCTT
CTTTCAGACATGTATTTGAAAGTATCTCTTCTCTTGGATAATGACATAAT
CGTCAGTAAACGTTCCAAAACCTTCACATCAACTCGTGATCTACATCTTA
CACAAACATTCGAATTCAGTGCTCTGTCTGATGAACTCGATAAAATGTCG
ACGGAGACAAGCCCTATATTAAAAGTAGCAGACGAACTCATAACTAATGC
TTCTTCCAACTATAAAAAATCACTGGTCATCAAAGATGTGCGTTCAGTTC
GCGAAACTTTTGCATCAGATACTTTAAAGAACCATATGGGTGTTTTAATT
AGTGTGCGTGCGACCACGGGCACAACGAGGAATAAGCGAGTGATTGGACG
GCTTTACCTTGGTAAAACGAACTTTCCTTTTAATGATGAAGAATTTCACT
GGGTTGAAATG Coding sequence (CDS) from alignment at sc0000100_pilon:273636..275896- >XLOC_034912 ID=XLOC_034912|Name=XLOC_034912|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2994bp|location=Sequence derived from alignment at sc0000100_pilon:273636..275896- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTTTCACAATGCCATCTCAGATGAGTTTTCACAATGCCATCTCAG
GAACTCCTGGCATCATTTTGATAGTTGTGATTTCGTTCGTTTTGATCCTG
CTCATTTGTGCTGCTCTTTATCTCCTCAAAAACAAAAAAACAAAGAACGT
CCGACAGTCGATCTTTGATCACGAAAAACAAATAAAGTACGGTATACTAG
ACTATCCGCAGTCTGGAACTCCAGAATTTCATCCAAACCCGATCCAGCCC
CCTTATCAAACGAAAGTGAAAGTGAAGCTAATACCTAATAATGCGAAAAC
AAAGACGTCTTTAAAATACACAGAACTCGGCGAAGGTGTTGAAGAAGCTC
AGGAGGACCATAAAATTTTGGATGACCTCTCCAGTGGAGAGCACTCACCC
AATCAAAAAGATTTCCGCAGGTCTGTACATCTTTATAAAGATAAAATCAC
AAACTTTATTTCCAAATATCGTGATGATCATGATTTATCGTCTTTACCAC
AAAATGATACGGAACGCAGGATCTGGCAACCGGAACCAGTTGCGGTCAAT
CAAACACATCGTTTACAAAGACCAGATAGTGTTCTTTCCAATGAACAAGA
AATGAGTTTAGGACGGTTAACTTTTACCATGTATTACCTACCTGGTGATG
AATATTTAACTTTACTTTTGATATCTGGTCGACAATTGAACTCCTGTGAT
TCCTTATATAACATTCGTTTGCCAGCTGTCAGTATCGTCATCGAAAATAA
TCCCAATACCGAAGTCACTTCAAACCCGGATGAAGCACCTAATCCGGAGT
ATGACCAAGAATTCACTTTCACTATCCGCTCAAAAGAACTTTTCGATGTG
GTATTACGATTTACTGTTTGGGATATTATATCGAATAACGAAACCAGAGT
GCTTGGCTTTTTTCGTGTACCTTTAGCACAATACCAAAAGACTCTGTTAG
CTGGTTCTGATACAGGACCGATTTGTCGTGAAATACAACCCTGTCTCAAT
CCTGAACTCCTGGCATCATTTTGATAGTTGTGATTTCGTTCGTTTTGATC
CTGCTCATTTGTGCTGCTCTTTATCTCCTCAAAAACAAAAAAACAAAGAA
CGTCCGACAGTCGATCTTTGATCACGAAAAACAAATAAAGTACGGTATAC
TAGACTATCCGCAGTCTGGAACTCCAGAATTTCATCCAAACCCGATCCAG
CCCCCTTATCAAACGAAAGTGAAAGTGAAGCTAATACCTAATAATGCGAA
AACAAAGACGTCTTTAAAATACACAGAACTCGGCGAAGGTGTTGAAGAAG
CTCAGGAGGACCATAAAATTTTGGATGACCTCTCCAGTGGAGAGCACTCA
CCCAATCAAAAAGATTTCCGCAGGTCTGTACATCTTTATAAAGATAAAAT
CACAAACTTTATTTCCAAATATCGTGATGATCATGATTTATCGTCTTTAC
CACAAAATGATACGGAACGCAGGATCTGGCAACCGGAACCAGTTGCGGTC
AATCAAACACATCGTTTACAAAGACCAGATAGTGTTCTTTCCAATGAACA
AGAAATGAGTTTAGGACGGTTAACTTTTACCATGTATTACCTACCTGGTG
ATGAATATTTAACTTTACTTTTGATATCTGGTCGACAATTGAACTCCTGT
GATTCCTTATATAACATTCGTTTGCCAGCTGTCAGTATCGTCATCGAAAA
TAATCCCAATACCGAAGTCACTTCAAACCCGGATGAAGCACCTAATCCGG
AGTATGACCAAGAATTCACTTTCACTATCCGCTCAAAAGAACTTTTCGAT
GTGGTATTACGATTTACTGTTTGGGATATTATATCGAATAACGAAACCAG
AGTGCTTGGCTTTTTTCGTGTACCTTTAGCACAATACCAAAAGACTCTGT
TAGCTGGTTCTGATACAGGACCGATTTGTCGTGAAATACAACCCTGTCTC
AATCCTCCTTCTATGGTACTTGGTCAATTACTGATTTCTCTACTTTACGA
TTGCGTGACTGACAAAATCTTTGTCACTGTGCGACAATTTCATCAATTAT
CTGTTTCCAAAGATGATCTAGCCTTCTATGGTACTTGGTCAATTACTGAT
TTCTCTACTTTACGATTGCGTGACTGACAAAATCTTTGTCACTGTGCGAC
AATTTCATCAATTATCTGTTTCCAAAGATGATCTAGACATGTATTTGAAA
GTATCTCTTCTCTTGGATAATGACATAATCGTCAGTAAACGTTCCAAAAC
CTTCACATCAACTCGTGATCTACATCTTACACAAACATTCGAATTCAGTG
CTCTGTCTGATGAACTCGATAAAATGTCGACGGAGACAAGCCCTATATTA
AAAGTAGCAGACGAACTCATAACTAATGCTTCTTCCAACTATAAAAAATC
ACTGGTCATCAAAGATGTGCGTTCAGTTCGCGAAACTTTTGCATCAGATA
CTTTAAAGAACCATATGGGTGTTTTAATTAGTGTGCGTGCGACCACGGGC
ACAACGAGGAATAAGCGAGTGATTGGACGGCTTTACCTTGGTAAAACGAA
CTTTCCTTTTAATGATGAAGAATTTCACTGGGTTGAAATGACATGTATTT
GAAAGTATCTCTTCTCTTGGATAATGACATAATCGTCAGTAAACGTTCCA
AAACCTTCACATCAACTCGTGATCTACATCTTACACAAACATTCGAATTC
AGTGCTCTGTCTGATGAACTCGATAAAATGTCGACGGAGACAAGCCCTAT
ATTAAAAGTAGCAGACGAACTCATAACTAATGCTTCTTCCAACTATAAAA
AATCACTGGTCATCAAAGATGTGCGTTCAGTTCGCGAAACTTTTGCATCA
GATACTTTAAAGAACCATATGGGTGTTTTAATTAGTGTGCGTGCGACCAC
GGGCACAACGAGGAATAAGCGAGTGATTGGACGGCTTTACCTTGGTAAAA
CGAACTTTCCTTTTAATGATGAAGAATTTCACTGGGTTGAAATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:273636..275896 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1096-1497:403 |
| Aaloc | 979-1092:757 |
| Aaloc | 28-978:2041 |
| Aaloc | 1-24:2262 |
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