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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:269363..272112- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034911 ID=XLOC_034911|Name=XLOC_034911|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2750bp|location=Sequence derived from alignment at sc0000100_pilon:269363..272112- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTCTGTTATTTGTGATATGGTACTTCAGTTGGTAAGTTTATTTATT
TGGGCTTTTTTGCCTGTCCAATCTTCAATCAGAAGCAGCCGGCGGAGAGA
TTTTTTAGAAATATGTGTTCTTATCTTCTAGGAGACCAAATGTTATGACC
TTTCAATTTTTGATACGAATGATGTGTTCTGATTTCTAGGAAACCTTTGT
CACACTATTAGTCTCCCTAAACTTATCACTACTTTATAATTTGACGTGTT
CTAAAATCTAGGAAAACATCTTGGCAAGATAAACTTGTATTACATTTGTT
TTTCTCCACGAAAGATGTGTTCTATGTTATTTCTAGGGTTACTAGGCAAC
AAGATTACATCAATTTTCTCTTTATTATACCCCTGTCTCCTTAAAAGATG
TGTTCTGAAGTTTTCTAGGGTTACCTAGACAACAAGAACACGTTAGATGA
CCTTAATTATACCCCTGTCTCGTCAGAACACATCATTATTTCTAGCTGAT
TAATTTTCGAAGATCTGATCAGAACAGATCAAAATTTCTAGTTGAAATAT
GCTCTCAGAACACATCGGAAAAAAAGGTCGCCTCGCCGGCTGCTTTCGTT
CAATCTCCTTCCATCAAATCATCCATGTTTTTTTCGCATCAAATCAATCT
TAAACACTACATATTCCAGGGGGTGGACGAGCATTTCCAGTGGGTAATTG
GAGAAGAATTTCCAGGGGGTACAAAGGAGTAGTTTTTCATTTTTGCAGGG
GGTAAAAAGATATTCTAAAATCTACAGGGGGTAAAAGACTGATTTTTGCT
CATCCACCCTCACTTTTAAAGTATGAAAAGAATTTTTCCAAATATTGCCA
TTTCCATGGGGTATCTCTGAGAATCTTTTCTAGGCTTGAAAAGGTTCGTC
CCCCCCCTGTATATGGAATTTTAATGGAACAGTCCATTAAGTAGGACCTC
GTTGATTTTGATTTCGCTTAAGCGCAAATGGCAACGTTGCTTTGAATGAA
TTGACTAAACAACCTTGCTAGAATCTGTCAATATTGATATGAAATGTGTT
AAAATCTATTGTTTTAAATGGTCGGCGATACTATTCAATTTCTATTCTAG
TGTTATTACCACATTGCATGCGGCCAGAATCGACCAGTATGGTTACCATG
GAGATGCCAATGAACGCTTCTTAGATCAGGTGAGATGATTGTATTAAATA
CACACTTCTGAGAGCTGCCATGCTTATAAAGAGTGAGAATTTCTCCAAAA
GGTTACATTTCTGAGAGTCGATCTCAGTACTGTACAGAGTTTTTGTGGAG
AGCAGGTTTTAATGAAAATGTTTTTCAAATTCAGATATACCCACGACAAA
GTCAGCTCTACCGAACTACACCGAGGGAGACCAAAGTCATGAACGCTTTC
ATAACACAACTCAAAACAAAATGCAAGAATGACGTCATCTGTAAAACCTT
ACTGGAAAACATATTAGTAAACAGTTTGACAAGAAATCTACAGTCAATGA
GTCCAATCGGGGTAAAGTACCTTCAACTGCACGATCCTGTAGAGAAACTT
TACATTGCCATTTTGTCAGATCCTGATCTCTACATGTACTTTAACCAAAT
GTTTGAACAACAAAATCCTTCAGGCATTGTAGAAAATTGGGAAGAGTTCA
TCGTTCTTTTGAATTATGTGATGACATATCCACCACAGTATAATCGCTAC
AGTGATAGCTTTTTGTTGTGTTGTCCCATAAATGCTCTCCTAGACTGGCC
TTCATCGACACCTGCGGGCCGTGCGTGCTTCCTGCACGAAAATCTCAACA
AACTTGCTAAAGACATTCTAAACTACTGGGGTAAATACCTTCAAAGTGAG
GCTTCGACAACTTTTTTGAGTGACTCGTTAAACGGATGGTTCAGTAGTGT
AGCTCTTGAGGCGATGAAAGATTGGCATGGCAGAACATTTCAACAACAAT
TCGTATGTGATCCAATGAAACCACATTGGGGATTTCAAAGTTGGGATGAT
TTCTTCACCAGAAAGTTTCGGGAAGGGATGCGACCTCTTCCATATCCAGA
CAGTTCAAAGTTTATCACAAACGCTTGTGAATCAGTACCCATTAAGATTG
CCAGAGATGTCAAAGCCAGAGATATGTTTTGGATCAAGGAACAACCCTAC
TCCCTTTCTCATATGCTCAACAATAACAAATTACACAAATACTTCATAGG
AGGAACAGTGTACCAAGGTTTCTTAAGCACCAATGCTTACCATCGCTGGC
ATAGTCCAATCTCTGGGACCATTATTGATTATGAACATATTGAAGGTGCT
TACTTTTCACAAGCATACAGTGTTGATGGTGACTCACATGCACCTGTTAA
GTCTCAAAGCTATTTAAGTCAAGTCGCAGCTCGTGCAGCTATTTACATTT
TAGCAGATGATCCTGAAATAGGCGTCATTTGTTTTCTCTCCATCGGCATG
GTAGAAATCTCTTCGAATGAAATAACAGTTCAAAAAGGACAACATGTTGA
CAAAGGGGATGAATTAGGGATGTTTCATTATGGTGGTTCGTCTCACTGTT
TGATATTCCCACCCCATCTAGATGTTGTGTTTGATGTTGTCCCAACTGAT
GTCTCGCACGAAATGCTACTGTTACGGGAACCTAATATTCATGTTCGAAG
CAAAATTGCCACCGTTCGATTGAAAACTCAACATCATGGAAAGGTTGCTA
GTGAAGAGTTGAGAAGATATACAGTGGAAACTGTTTATAGAAAGCCTTAA
Coding sequence (CDS) from alignment at sc0000100_pilon:269363..272112- >XLOC_034911 ID=XLOC_034911|Name=XLOC_034911|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3060bp|location=Sequence derived from alignment at sc0000100_pilon:269363..272112- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTCTGTTATTTGTGATATGGTACTTCAGTTGATGTGTCTGTTATTT
GTGATATGGTACTTCAGTTGTGTTATTACCACATTGCATGCGGCCAGAAT
CGACCAGTATGGTTACCATGGAGATGCCAATGAACGCTTCTTAGATCAGT
GTTATTACCACATTGCATGCGGCCAGAATCGACCAGTATGGTTACCATGG
AGATGCCAATGAACGCTTCTTAGATCAGATATACCCACGACAAAGTCAGC
TCTACCGAACTACACCGAGGGAGACCAAAGTCATGAACGCTTTCATAACA
CAACTCAAAACAAAATGCAAGAATGACGTCATCTGTAAAACCTTACTGGA
AAACATATTAGTAAACAGTTTGACAAGAAATCTACAGTCAATGAGTCCAA
TCGGGGTAAAGTACCTTCAACTGCACGATCCTGTAGAGAAACTTTACATT
GCCATTTTGTCAGATCCTGATCTCTACATGTACTTTAACCAAATGTTTGA
ACAACAAAATCCTTCAGGCATTGTAGAAAATTGGGAAGAGTTCATCGTTC
TTTTGAATTATGTGATGACATATCCACCACAGTATAATCGCTACAGTGAT
AGCTTTTTGTTGTGTTGTCCCATAAATGCTCTCCTAGACTGGCCTTCATC
GACACCTGCGGGCCGTGCGTGCTTCCTGCACGAAAATCTCAACAAACTTG
CTAAAGACATTCTAAACTACTGGGGTAAATACCTTCAAAGTGAGGCTTCG
ACAACTTTTTTGAGTGACTCGTTAAACGGATGGTTCAGTAGTGTAGCTCT
TGAGGCGATGAAAGATTGGCATGGCAGAACATTTCAACAACAATTCGTAT
GTGATCCAATGAAACCACATTGGGGATTTCAAAGTTGGGATGATTTCTTC
ACCAGAAAGTTTCGGGAAGGGATGCGACCTCTTCCATATCCAGACAGTTC
AAAGTTTATCACAAACGCTTGTGAATCAGTACCCATTAAGATTGCCAGAG
ATGTCAAAGCCAGAGATATGTTTTGGATCAAGGAACAACCCTACTCCCTT
TCTCATATGCTCAACAATAACAAATTACACAAATACTTCATAGGAGGAAC
AGTGTACCAAGGTTTCTTAAGCACCAATGCTTACCATCGCTGGCATAGTC
CAATCTCTGGGACCATTATTGATTATGAACATATTGAAGGTGCTTACTTT
TCACAAGCATACAGTGTTGATGGTGACTCACATGCACCTGTTAAGTCTCA
AAGCTATTTAAGTCAAGTCGCAGCTCGTGCAGCTATTTACATTTTAGCAG
ATGATCCTGAAATAGGCGTCATTTGTTTTCTCTCCATCGGCATGGTAGAA
ATCTCTTCGAATGAAATAACAGTTCAAAAAGGACAACATGTTGACAAAGG
GGATGAATTAGGGATGTTTCATTATGGTGGTTCGTCTCACTGTTTGATAT
TCCCACCCCATCTAGATGTTGTGTTTGATGTTGTCCCAACTGATGTCTCG
CACGAAATGCTACTGTTACGGGAACCTAATATTCATGTTCGAAGCAAAAT
TGCCACCGTTCGATTGAAAACTCAACATCATGGAAAGGTTGCTAGTGAAG
AGTTGAGAAGATATACAGTGGAAACTGTTTATAGAAAGCCTTAAATATAC
CCACGACAAAGTCAGCTCTACCGAACTACACCGAGGGAGACCAAAGTCAT
GAACGCTTTCATAACACAACTCAAAACAAAATGCAAGAATGACGTCATCT
GTAAAACCTTACTGGAAAACATATTAGTAAACAGTTTGACAAGAAATCTA
CAGTCAATGAGTCCAATCGGGGTAAAGTACCTTCAACTGCACGATCCTGT
AGAGAAACTTTACATTGCCATTTTGTCAGATCCTGATCTCTACATGTACT
TTAACCAAATGTTTGAACAACAAAATCCTTCAGGCATTGTAGAAAATTGG
GAAGAGTTCATCGTTCTTTTGAATTATGTGATGACATATCCACCACAGTA
TAATCGCTACAGTGATAGCTTTTTGTTGTGTTGTCCCATAAATGCTCTCC
TAGACTGGCCTTCATCGACACCTGCGGGCCGTGCGTGCTTCCTGCACGAA
AATCTCAACAAACTTGCTAAAGACATTCTAAACTACTGGGGTAAATACCT
TCAAAGTGAGGCTTCGACAACTTTTTTGAGTGACTCGTTAAACGGATGGT
TCAGTAGTGTAGCTCTTGAGGCGATGAAAGATTGGCATGGCAGAACATTT
CAACAACAATTCGTATGTGATCCAATGAAACCACATTGGGGATTTCAAAG
TTGGGATGATTTCTTCACCAGAAAGTTTCGGGAAGGGATGCGACCTCTTC
CATATCCAGACAGTTCAAAGTTTATCACAAACGCTTGTGAATCAGTACCC
ATTAAGATTGCCAGAGATGTCAAAGCCAGAGATATGTTTTGGATCAAGGA
ACAACCCTACTCCCTTTCTCATATGCTCAACAATAACAAATTACACAAAT
ACTTCATAGGAGGAACAGTGTACCAAGGTTTCTTAAGCACCAATGCTTAC
CATCGCTGGCATAGTCCAATCTCTGGGACCATTATTGATTATGAACATAT
TGAAGGTGCTTACTTTTCACAAGCATACAGTGTTGATGGTGACTCACATG
CACCTGTTAAGTCTCAAAGCTATTTAAGTCAAGTCGCAGCTCGTGCAGCT
ATTTACATTTTAGCAGATGATCCTGAAATAGGCGTCATTTGTTTTCTCTC
CATCGGCATGGTAGAAATCTCTTCGAATGAAATAACAGTTCAAAAAGGAC
AACATGTTGACAAAGGGGATGAATTAGGGATGTTTCATTATGGTGGTTCG
TCTCACTGTTTGATATTCCCACCCCATCTAGATGTTGTGTTTGATGTTGT
CCCAACTGATGTCTCGCACGAAATGCTACTGTTACGGGAACCTAATATTC
ATGTTCGAAGCAAAATTGCCACCGTTCGATTGAAAACTCAACATCATGGA
AAGGTTGCTAGTGAAGAGTTGAGAAGATATACAGTGGAAACTGTTTATAG
AAAGCCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:269363..272112 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 115-1530:1417 |
| Aaloc | 37-114:1650 |
| Aaloc | 1-33:2751 |
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