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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:693875..697560+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034904 ID=XLOC_034904|Name=XLOC_034904|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3686bp|location=Sequence derived from alignment at sc0000102_pilon:693875..697560+ (Clytia hemisphaerica_ch_hm2_pilon)
TTACAGATGGATTATTCAGTCaagtatattttcaaacaaaatgatATTGG
TGATGATGGAAATGTTCTTCTGTTCCATTATGGTGATGCATATTATTTGT
TACATTGGTTTGGTTGTtgtcttcaatttttcaaactgaaGAAAGTTGAT
GAGCAACAACAGCAATCATTGCAAGAAATCAATGCTTCAAGGAAAAACCA
ACAATTTACACCTGACTACAAGTACTCCCTAAAAGAAAGGATACGTCTTA
TCGTCTTCAATGATGTTACAAACTCAAtcataattttgaatttaaagggC
GGAATATCAATAACAGCAGCAGAGAAGGTCTTGAAAATGTATGTACAGGC
AATATTATTTTACTTCCTATAAAACCAAATGACTCTTCCTTTTTCAAGTC
AAGCTTCAAGAGCTGTAAAGGTTTGATTATTTTACATCACTTTAAtcttt
tgaaacttcaaaataaaaaaatggaaaatggaatttaaaaagctgaaaca
tttgaaagacttttttggaaatcataaaagtGGAACTCAACTCATGTGAG
AAAAAATAATGTTATCAAGCTTAAATTTCAGATGATGGTTTGGCCATGGA
TTTGACTTACAGCCAAACTTTAAAGCTTTCCATTTCTTGTATTTACAGTC
TcatttatcttttattttagtCAGCAAAATGATGAAGAGATGGATTATGA
ACCTGGTGACATATTTAACAATCTTCTTGCTCAAAGTGTCCAGCCATCAA
ATGAATTAAACCTCGAATCTATCGTCACAGTTTCAAACGTTTTCACCATC
AAGACAGTTGAAAATTACCTATATGTGATTTCTAGTGCATCTAAGTCCAA
TATTCTTACCAGAATCTATTTAATTGAAAGAAATGAAGATGGTTTGAGGT
TATCTCCTAAATTTAAACAGAATTTGGGAGGCGAGATCAAATCTGACGCA
ATTTGTTTACCAGAAAATTTCACTGCGTATCAGGAATTGAACTCAAATTT
AGAATTACCAGGAATCATTTTCAGTACATCAAACGGGTTGATACTTTGCA
GTAACCCCAGTTCTGCTACACCATCTTTAATTTATGATTTGAAACAAAGA
TTGGCTGGAGTTGTGCATGTTACATTACCAAAAACCACTGAATTGTCAAC
AAACAATCTGATACCATCAAGTCAACCTAAATATGTGTCTTTGAACGGGG
ATTGTTTATGTTTTGTCGGAGAAAACGGCCGAGTCAGTGTCGCTATACCC
AACAACACCATAAAAAGGAAATGCATTGAGTTTACTGTTGGGCAATTATC
CATCAATGTCGTTTTTTGTACCAGCTTTCAGGATATTCTCATTGCTGCAT
CAGAAGATCATATTTTATTCTTCAAACTTGTTTGCAAATGCAAAATTGAA
TCAAAACACTCTccaaatagaaaaatcataaatgtaagtttttcactttt
aaaggAGATTAAAATACCGAATGTCAACAAATTAATTATGGATCCACTGA
ATCCTGGAGTCATCATTTGTCATAACACTGCAAAGTCCATAATGGTAGTG
AATCTTGGAGATTTTTGGGTAACAAAAGAAGGAGATTGTCAAAAGGATCC
ACGAACAGTCACATCATTGTTAAAGGTTTACgaagaacaaaaaaaagaaa
atgaacttTTGAAAAACGAATCTGTAGAACTGAATAAAACATTGATCCAT
CTCAGTATTGTCGGTGAATGGGTGAAGTCAATTAAAAAGGATTCAAAATC
ATGCTTTGGGATCGACAAGAGAATCACCGTTGTCAGATCTAACAGTAAGA
AACTGGCTTTTCTCACATTGAGCatacaaaataaatcaaaattagcAGTA
CCAGCATTTTGTTCCATCAACATCCAATATCAATCTCAATTTCAACCTAA
AATGATCAAAACAGAAACAATACAGTTGAATACATCACCACCAACTGCAA
AACAATCAATAACTATCGAACTATCAGATCGATTCATGCGTTTTTCACCG
ATCGATTTCAATACATCCATAACATTTTCCTTACAAACCTACCAAAGTAT
TTCTTTACCTTTGCGAACATTCACTGTAaacattctagatttttgtgaCA
TTAGTCCGACTATGTTTTCAATGTCAAAGCAAATGCTGGCATTCCCTAAA
ACCTATCTGGAGCAACAAAATCAACCATCTCACAGCATTTGCATCAAGCT
TGATCCCACAAAATTTGACAATAACAAAGACGCATTTTGTAACTGCCTTT
CTACTtgtttgaatattgaaattaagaaaacgaaagaaaactttttaaga
taCAACATCGAATATATACATGGGGAGACAGCAGAGGTTGAGATTAAATT
GGATAATTTTATCGTATCAGTATCAACAAAAAATGTTATGTTTTTGGCAT
CTTTGCATCATCATTTCAGTGGTTGTTTGAAGGTACTTCTTTTATCTTTG
ATAATGATcagaaattgttcttttttattttaagtattCTCAAAGACTAA
AACATTTGGATGAAGATTCCGCACGTTTGTGTCACGTTGAAGGAGTATTT
GGACTTTCTGATCTAGTTATTGTGGATGTGACATGTGATGATGCATTACA
GTCATTGTAAAGTGTAGAATAGTCGAGGATCTGAAAGCCATCTAccactc
tcgggtacctaatagccgtccctcccccccgctaattaatttttcgaaaa
ttttccacccaggacattcttattccaacccccctcttattaattttttg
ggaaaatgtttttaaaaattcccccttttgtcctaattctgcggTAATAG
CCTCCTTTTCAccttttccacccaggacatttgtATTcaaaaaccccccc
ccccccgcttattaagttttgagatttttccaaccccccccctggctatt
aggtacccgagagtaggttaaaaaaaCATTGATACCCGTGTATTCTAGTG
AATGAATTGCTAACGTATTTCATCTCTTCTTGCCGTTAGGAATTTACCAT
TCTCAATGGAGAGTGTGGCGAAGAAACGAAGCAGAAAATTgtggtttgtt
tatttttataatctcaCAAACAAAATAATGAACGAGGATAACTATCTTAT
TGTTGAAATCACCATGAATGGTCAGTCTTAGTTTGATCAATGGTCCATTA
GGTTCTACAGTGGAATGAACCACAGATttaaaaagcccgaagggctagat
gtcatgctttaagccatcgtagtcaaaacaaattgaatgtcggaaaaaat
attgttgaaattgattttgaaaacctgcgaagcttctgattggtcaagcg
ctgaaattatattgtaatgtcacgaCATCTAAGCCCTTCGGGCCTTATAA
ATCTTTGCATGGGGCAGCATTCATAAACAAGGGATTATACTTCCATAAGC
ACTTTCATTATCTGAAATTTGTCTGGTTTCCAAagtgaaatttggaaaag
tCAAGAAACCGTCTCATTACTTATTTACAACTTGGTGACATTGCAAGGAG
GCGATAAAAGTATCTCTCTCGCTTATAAATGTGCCGAGATCTAAATATGA
ttatttaaaatgatttttcttccaCCAGGAAAGTTTAAAGGAGCTGTCAT
CTGCGTTCACCAAGAATATTACTGGACAAgattctgctgacgtcatctcT
ACATTATCCAAGTTTTATTCTCTACAACGCCAATGA Coding sequence (CDS) from alignment at sc0000102_pilon:693875..697560+ >XLOC_034904 ID=XLOC_034904|Name=XLOC_034904|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4524bp|location=Sequence derived from alignment at sc0000102_pilon:693875..697560+ (Clytia hemisphaerica_ch_hm2_pilon)
TTACAGATGGATTATTCAGTCaagtatattttcaaacaaaatgatATTGG
TGATGATGGAAATGTTCTTCTGTTCCATTATGGTGATGCATATTATTTGT
TACATTGGTTTGGTTGTtgtcttcaatttttcaaactgaaGAAAGTTGAT
GAGCAACAACAGCAATCATTGCAAGAAATCAATGCTTCAAGGAAAAACCA
ACAATTTACACCTGACTACAAGTACTCCCTAAAAGAAAGGATACGTCTTA
TCGTCTTCAATGATGTTACAAACTCAAtcataattttgaatttaaagggC
GGAATATCAATAACAGCAGCAGAGAAGGTCTTGAAAATTTACAGATGGAT
TATTCAGTCaagtatattttcaaacaaaatgatATTGGTGATGATGGAAA
TGTTCTTCTGTTCCATTATGGTGATGCATATTATTTGTTACATTGGTTTG
GTTGTtgtcttcaatttttcaaactgaaGAAAGTTGATGAGCAACAACAG
CAATCATTGCAAGAAATCAATGCTTCAAGGAAAAACCAACAATTTACACC
TGACTACAAGTACTCCCTAAAAGAAAGGATACGTCTTATCGTCTTCAATG
ATGTTACAAACTCAAtcataattttgaatttaaagggCGGAATATCAATA
ACAGCAGCAGAGAAGGTCTTGAAAATtCAGCAAAATGATGAAGAGATGGA
TTATGAACCTGGTGACATATTTAACAATCTTCTTGCTCAAAGTGTCCAGC
CATCAAATGAATTAAACCTCGAATCTATCGTCACAGTTTCAAACGTTTTC
ACCATCAAGACAGTTGAAAATTACCTATATGTGATTTCTAGTGCATCTAA
GTCCAATATTCTTACCAGAATCTATTTAATTGAAAGAAATGAAGATGGTT
TGAGGTTATCTCCTAAATTTAAACAGAATTTGGGAGGCGAGATCAAATCT
GACGCAATTTGTTTACCAGAAAATTTCACTGCGTATCAGGAATTGAACTC
AAATTTAGAATTACCAGGAATCATTTTCAGTACATCAAACGGGTTGATAC
TTTGCAGTAACCCCAGTTCTGCTACACCATCTTTAATTTATGATTTGAAA
CAAAGATTGGCTGGAGTTGTGCATGTTACATTACCAAAAACCACTGAATT
GTCAACAAACAATCTGATACCATCAAGTCAACCTAAATATGTGTCTTTGA
ACGGGGATTGTTTATGTTTTGTCGGAGAAAACGGCCGAGTCAGTGTCGCT
ATACCCAACAACACCATAAAAAGGAAATGCATTGAGTTTACTGTTGGGCA
ATTATCCATCAATGTCGTTTTTTGTACCAGCTTTCAGGATATTCTCATTG
CTGCATCAGAAGATCATATTTTATTCTTCAAACTTGTTTGCAAATGCAAA
ATTGAATCAAAACACTCTccaaatagaaaaatcataaatgtaagtttttc
acttttaaaggAGATTAAAATACCGAATGTCAACAAATTAATTATGGATC
CACTGAATCCTGGAGTCATCATTTGTCATAACACTGCAAAGTCCATAATG
GTAGTGAATCTTGGAGATTTTTGGGTAACAAAAGAAGGAGATTGTCAAAA
GGATCCACGAACAGTCACATCATTGTTAAAGGTTTACgaagaacaaaaaa
aagaaaatgaacttTTGAAAAACGAATCTGTAGAACTGAATAAAACATTG
ATCCATCTCAGTATTGTCGGTGAATGGGTGAAGTCAATTAAAAAGGATTC
AAAATCATGCTTTGGGATCGACAAGAGAATCACCGTTGTCAGATCTAACA
GTAAGAAACTGGCTTTTCTCACATTGAGCatacaaaataaatcaaaatta
gcAGTACCAGCATTTTGTTCCATCAACATCCAATATCAATCTCAATTTCA
ACCTAAAATGATCAAAACAGAAACAATACAGTTGAATACATCACCACCAA
CTGCAAAACAATCAATAACTATCGAACTATCAGATCGATTCATGCGTTTT
TCACCGATCGATTTCAATACATCCATAACATTTTCCTTACAAACCTACCA
AAGTATTTCTTTACCTTTGCGAACATTCACTGTAaacattctagattttt
gtgaCATTAGTCCGACTATGTTTTCAATGTCAAAGCAAATGCTGGCATTC
CCTAAAACCTATCTGGAGCAACAAAATCAACCATCTCACAGCATTTGCAT
CAAGCTTGATCCCACAAAATTTGACAATAACAAAGACGCATTTTGTAACT
GCCTTTCTACTtgtttgaatattgaaattaagaaaacgaaagaaaacttt
ttaagataCAACATCGAATATATACATGGGGAGACAGCAGAGGTTGAGAT
TAAATTGGATAATTTTATCGTATCAGTATCAACAAAAAATGTTATGTTTT
TGGCATCTTTGCATCATCATTTCAGTGGTTGTTTGAAGtCAGCAAAATGA
TGAAGAGATGGATTATGAACCTGGTGACATATTTAACAATCTTCTTGCTC
AAAGTGTCCAGCCATCAAATGAATTAAACCTCGAATCTATCGTCACAGTT
TCAAACGTTTTCACCATCAAGACAGTTGAAAATTACCTATATGTGATTTC
TAGTGCATCTAAGTCCAATATTCTTACCAGAATCTATTTAATTGAAAGAA
ATGAAGATGGTTTGAGGTTATCTCCTAAATTTAAACAGAATTTGGGAGGC
GAGATCAAATCTGACGCAATTTGTTTACCAGAAAATTTCACTGCGTATCA
GGAATTGAACTCAAATTTAGAATTACCAGGAATCATTTTCAGTACATCAA
ACGGGTTGATACTTTGCAGTAACCCCAGTTCTGCTACACCATCTTTAATT
TATGATTTGAAACAAAGATTGGCTGGAGTTGTGCATGTTACATTACCAAA
AACCACTGAATTGTCAACAAACAATCTGATACCATCAAGTCAACCTAAAT
ATGTGTCTTTGAACGGGGATTGTTTATGTTTTGTCGGAGAAAACGGCCGA
GTCAGTGTCGCTATACCCAACAACACCATAAAAAGGAAATGCATTGAGTT
TACTGTTGGGCAATTATCCATCAATGTCGTTTTTTGTACCAGCTTTCAGG
ATATTCTCATTGCTGCATCAGAAGATCATATTTTATTCTTCAAACTTGTT
TGCAAATGCAAAATTGAATCAAAACACTCTccaaatagaaaaatcataaa
tgtaagtttttcacttttaaaggAGATTAAAATACCGAATGTCAACAAAT
TAATTATGGATCCACTGAATCCTGGAGTCATCATTTGTCATAACACTGCA
AAGTCCATAATGGTAGTGAATCTTGGAGATTTTTGGGTAACAAAAGAAGG
AGATTGTCAAAAGGATCCACGAACAGTCACATCATTGTTAAAGGTTTACg
aagaacaaaaaaaagaaaatgaacttTTGAAAAACGAATCTGTAGAACTG
AATAAAACATTGATCCATCTCAGTATTGTCGGTGAATGGGTGAAGTCAAT
TAAAAAGGATTCAAAATCATGCTTTGGGATCGACAAGAGAATCACCGTTG
TCAGATCTAACAGTAAGAAACTGGCTTTTCTCACATTGAGCatacaaaat
aaatcaaaattagcAGTACCAGCATTTTGTTCCATCAACATCCAATATCA
ATCTCAATTTCAACCTAAAATGATCAAAACAGAAACAATACAGTTGAATA
CATCACCACCAACTGCAAAACAATCAATAACTATCGAACTATCAGATCGA
TTCATGCGTTTTTCACCGATCGATTTCAATACATCCATAACATTTTCCTT
ACAAACCTACCAAAGTATTTCTTTACCTTTGCGAACATTCACTGTAaaca
ttctagatttttgtgaCATTAGTCCGACTATGTTTTCAATGTCAAAGCAA
ATGCTGGCATTCCCTAAAACCTATCTGGAGCAACAAAATCAACCATCTCA
CAGCATTTGCATCAAGCTTGATCCCACAAAATTTGACAATAACAAAGACG
CATTTTGTAACTGCCTTTCTACTtgtttgaatattgaaattaagaaaacg
aaagaaaactttttaagataCAACATCGAATATATACATGGGGAGACAGC
AGAGGTTGAGATTAAATTGGATAATTTTATCGTATCAGTATCAACAAAAA
ATGTTATGTTTTTGGCATCTTTGCATCATCATTTCAGTGGTTGTTTGAAG
GAATTTACCATTCTCAATGGAGAGTGTGGCGAAGAAACGAAGCAGAAAAT
TgtgGAATTTACCATTCTCAATGGAGAGTGTGGCGAAGAAACGAAGCAGA
AAATTgtgGAAAGTTTAAAGGAGCTGTCATCTGCGTTCACCAAGAATATT
ACTGGACAAgattctgctgacgtcatctcTACATTATCCAAGTTTTATTC
TCTACAACGCCAATGAGAAAGTTTAAAGGAGCTGTCATCTGCGTTCACCA
AGAATATTACTGGACAAgattctgctgacgtcatctcTACATTATCCAAG
TTTTATTCTCTACAACGCCAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:693875..697560 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2155-2262:3579 |
| Aaloc | 2101-2154:2990 |
| Aaloc | 340-2100:672 |
| Aaloc | 1-336:1 |
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