|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000299_pilon:28218..30547- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034899 ID=XLOC_034899|Name=XLOC_034899|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2330bp|location=Sequence derived from alignment at sc0000299_pilon:28218..30547- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAAAAGTCCCCTATTTATTCTTTAGAGATATGACTAAAACATGTAT
TTTTAAAAATCTATATGCATCATTATTACCGAAACAAACGAAACAAATCT
GTCAATTCAGTACAGCAACATCAAGAAGATATAGCAAGAAAAATGCTGAC
ACAAAGTTGATAGAAACTTCTGTCCGATATAATGGCGTCCGAATTCAAAT
GCCACCAAATAAAGAATGGTCAAATGAACAATTCGAATCCGAATTACTGA
GTAAGTGAGATTTTGGTTGAGACTAAATTATGTATATTCACTCAAGAGAA
AAAGAAATTGAGAAATTCACTGGGCAGTCTTGAAACCACAATCGATTTGT
AAGTGCTCTAAATTAGGTTCGAAGATTAGAGTTTTAACTCTGAGTTTTAA
CGCTAGACTTAATACTTAGGATCTGAGGATCCAAAAGCTCAAAAATAGTC
CAATAAGGCTCAGGATATAGCCTGAAAGACTGCCAACCCCTCCCAAATTG
AAATATTCGATTGAATTAAAGAGATAGCCCAAAATCTCGCCAGAACTTTA
AATCTTGAAAAACGTTAAAATAACCGGAATTCTCAAAATATATTTTCTGA
AAAGGGCTCGGCAATAAACATGTTAGAATATCGCAAATTTTCGTTCCAGG
GTTATCAGAAGGTTGGAGAGAGCGGGGTGCTCGAAGTGCATTCCTTGAAA
TTCCCATTCAAATGAGTCACGTGATACCAGTGGCCTCAAAGTATGGCTTT
CAGTACCACCATGCACGTGGGCAGCAAGCAGTGTTATGCAAATGGTTAGT
TGAGAATGAAGAAAATAAAATCCCAAACTTTTCAAATCACACAGTAGGAG
TGGCAGGTAGGCTAAAATTATAGGTTCTTGATTTACTGTGAAAAATGACA
GATACAATCTGAGCCACGCATACTTCAAACAAAAGTCTATCACTCTTCTC
AACGAAAAATTTCATTTAAGTAAGATTCTTTTTGCATTTATTTAACACGG
TTACTTGATACTCAACTTAAACAACAACTAGAATATGAACTGATGATTCT
GTCTATCTACGTCAAAAAGATCAGCATTTTATTTAACCTTGCTCTTTCTT
GTTTGTATTGATACCTGATAATTTTTCTGGTAGGGGCGTGTTATCGTGAA
GATTCAAACGAGCTACTAGTCGTCCGTGACAAAGGAAAGGTAAAGACAAT
TGTACTTTCGACCAACTACAACTAAGAAGCCTAGATCTGCTCTAAAAGAT
GTCACCGTCATATTTTGGGTGGATTTGCCTCCCTTTAAAAAAATTTCAAA
ACATCTCAAAAAATATTTTGCTCATTCTGTCTAGCTCGTCCAATTACGTC
CGGAAATGTGACAGCTTGCCCTATGCACCCTACCATACCGTTTAGATTGA
TTTTTTGATTGACCCTTTTTCTCATAGTTTTCCCATTGGTGGAAATTCCC
TGGTGGATATTCAGATTTAGGAGAATATATAGGTAAGTATCTGACTAATA
TTTAACCTGATTTAAAATTTAAAATTGCTAGAATTTGTCATAGATAAATA
GCCCAAATCACGCATCAGGTCTCAAATGTTTGTCCTATCACGCTATCACA
CAAGAAAAAAGGCCAAATAATGTCATAACAGCCTGTTAGAAGAAAACCGC
TTTTTTACGCAGTTTAACAAATAAAAAATTTATGGTTGGCTGAAAGTACT
GTCTATTCATCACGCAAGTTGGTAGGGGGGACTCATTCTAGAAATATGAA
CTATTATTACTCAGTTTTGTTTCTGTACATACATTTTTATAAGCGCTGAT
CGACTCTTTTTCATAACTATTTGATAGGTGAAACCGCAACGCGTGAAGTG
TTCGAAGAAACTGGTGTACGATCAGGTAATAATGTATTAATTATGTTAAA
CATTACCAAATCCATGGAAAAAGCTGTAAATACTTTCGAAACCCATTCTC
AGTCTTAATCAACAAGAAATAAGATAATTTTAATTCGTCTTATTTTCGCA
GAATTCAAATCGATTTTGAGCTTCCGACAACACCACGGTGTTTTTTACGA
CCAATCCGATCTCTACTACATATGTCGATTGAACCCGTTAACATACGAAC
TTTCACCGTGTCCTCACGAAATCGAAGATTGTGCATGGAAAAATATCAAC
GAACTTTTAAACGTGGATAACACAACACCTTTCGTCAAAATGATTTGCCG
TTTAATGCAACATGGACAAGAAGTCGGTTTCAATGAGGTCGATATCAGTG
AGCATGATTTAGAGAACTGGGCAAGACCTGGTAATCGAATGAAAATCTTT
CACCGGGATATCGAATCGCACCATGATTAA Coding sequence (CDS) from alignment at sc0000299_pilon:28218..30547- >XLOC_034899 ID=XLOC_034899|Name=XLOC_034899|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000299_pilon:28218..30547- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAAAAGTCCCCTATTTATTCTTTAGAGATATGACTAAAACATGTAT
TTTTAAAAATCTATATGCATCATTATTACCGAAACAAACGAAACAAATCT
GTCAATTCAGTACAGCAACATCAAGAAGATATAGCAAGAAAAATGCTGAC
ACAAAGTTGATAGAAACTTCTGTCCGATATAATGGCGTCCGAATTCAAAT
GCCACCAAATAAAGAATGGTCAAATGAACAATTCGAATCCGAATTACTGA
ATGCTAAAAGTCCCCTATTTATTCTTTAGAGATATGACTAAAACATGTAT
TTTTAAAAATCTATATGCATCATTATTACCGAAACAAACGAAACAAATCT
GTCAATTCAGTACAGCAACATCAAGAAGATATAGCAAGAAAAATGCTGAC
ACAAAGTTGATAGAAACTTCTGTCCGATATAATGGCGTCCGAATTCAAAT
GCCACCAAATAAAGAATGGTCAAATGAACAATTCGAATCCGAATTACTGA
GGTTATCAGAAGGTTGGAGAGAGCGGGGTGCTCGAAGTGCATTCCTTGAA
ATTCCCATTCAAATGAGTCACGTGATACCAGTGGCCTCAAAGTATGGCTT
TCAGTACCACCATGCACGTGGGCAGCAAGCAGTGTTATGCAAATGGTTAG
TTGAGAATGAAGAAAATAAAATCCCAAACTTTTCAAATCACACAGTAGGA
GTGGCAGGGTTATCAGAAGGTTGGAGAGAGCGGGGTGCTCGAAGTGCATT
CCTTGAAATTCCCATTCAAATGAGTCACGTGATACCAGTGGCCTCAAAGT
ATGGCTTTCAGTACCACCATGCACGTGGGCAGCAAGCAGTGTTATGCAAA
TGGTTAGTTGAGAATGAAGAAAATAAAATCCCAAACTTTTCAAATCACAC
AGTAGGAGTGGCAGGGGCGTGTTATCGTGAAGATTCAAACGAGCTACTAG
TCGTCCGTGACAAAGGAAAGGGGCGTGTTATCGTGAAGATTCAAACGAGC
TACTAGTCGTCCGTGACAAAGGAAAGTTTTCCCATTGGTGGAAATTCCCT
GGTGGATATTCAGATTTAGGAGAATATATAGTTTTCCCATTGGTGGAAAT
TCCCTGGTGGATATTCAGATTTAGGAGAATATATAGGTGAAACCGCAACG
CGTGAAGTGTTCGAAGAAACTGGTGTACGATCAGGTGAAACCGCAACGCG
TGAAGTGTTCGAAGAAACTGGTGTACGATCAGAATTCAAATCGATTTTGA
GCTTCCGACAACACCACGGTGTTTTTTACGACCAATCCGATCTCTACTAC
ATATGTCGATTGAACCCGTTAACATACGAACTTTCACCGTGTCCTCACGA
AATCGAAGATTGTGCATGGAAAAATATCAACGAACTTTTAAACGTGGATA
ACACAACACCTTTCGTCAAAATGATTTGCCGTTTAATGCAACATGGACAA
GAAGTCGGTTTCAATGAGGTCGATATCAGTGAGCATGATTTAGAGAACTG
GGCAAGACCTGGTAATCGAATGAAAATCTTTCACCGGGATATCGAATCGC
ACCATGATTAAAATTCAAATCGATTTTGAGCTTCCGACAACACCACGGTG
TTTTTTACGACCAATCCGATCTCTACTACATATGTCGATTGAACCCGTTA
ACATACGAACTTTCACCGTGTCCTCACGAAATCGAAGATTGTGCATGGAA
AAATATCAACGAACTTTTAAACGTGGATAACACAACACCTTTCGTCAAAA
TGATTTGCCGTTTAATGCAACATGGACAAGAAGTCGGTTTCAATGAGGTC
GATATCAGTGAGCATGATTTAGAGAACTGGGCAAGACCTGGTAATCGAAT
GAAAATCTTTCACCGGGATATCGAATCGCACCATGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000299_pilon | genome | sc0000299_pilon:28218..30547 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 619-945:328 |
| Aaloc | 571-615:502 |
| Aaloc | 514-567:904 |
| Aaloc | 460-513:1196 |
| Aaloc | 253-456:1680 |
| Aaloc | 1-249:2331 |
|
