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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000299_pilon:208740..211495+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034891 ID=XLOC_034891|Name=XLOC_034891|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2756bp|location=Sequence derived from alignment at sc0000299_pilon:208740..211495+ (Clytia hemisphaerica_ch_hm2_pilon)
ccaaATACAAACAAAGAAGCTGACCCACCAGACAAGATAAAAAAGGAATT
GCCAAGCAACAATAATAATTATCTAACAGAAATACCAATTGGCGTTAATG
ATAATACCACAAACATGATGGGTTTGAAGTTCCCCGAAAAATCCAAAGAA
ATGAATCTGACATCGGTAGCGGTGAAAGAAGAAAACACAGGACTGATGAA
GGGAGCTAGTAATGGTTTAGACTTGATGGACATTAATTCGCATCCATTTA
CCTTGGGCTTTTCACTTGGATCATCCCCTGAAAAACCTATTAGTCCTTTA
GACAACATGAACAGTGACATGAAGTTGTTTGAGGACATTGATAATTTTCC
AATTGCAAATTCACATGATAATTTCACGGTTGACGATTTGATTGGTAAAG
AGTTGTCTGATCTTGAAAAAGATACGACTACTAATACTTCAATGAGCGAG
TCCGAAGACCGAAGTGCATTTGATTCTTTCCAACAGAGTGACATTAATGA
TTCTCTTGTGTTGCACAAAAAGAACAATTTGTACAGTAAAGACAGCAAAA
AAGCTGAAAGTCAACAAAATGACTTGAATAATAAAAACTCTACTTTATCA
CAAGATAAAAAGACTGACCAACGCAATAAACTATCTTCAAAAAGTAACGA
AACTAAGGACAAATCAAAGAGTAAAAATACAAGGATAGAGGGTATGAACA
CGGCTTCAGCATCTGTAAAAGTGAACTCTGGTTCTAATGGTGGCCAACCA
TTCAAAACGAAAGCTCAGTTAAAGATGCCCGTAGCTGATAATACTAATAA
AGAGACTGAAAAACCTAAAAGTGTTGGAAAAACTAGGCGGCAATCGTCAA
GGTCTTCTGTTcgaaataaagataaaaaagaaaaacaatctaCTACAAGC
TGTAAAGGTAGAGAAAGCTTAACGAAAGAGCCTGAAAAGGCTAAAGTTAT
TGAACAATCTGAGGATGATGTTTTTGGTAGTATTTCTGAATCGTCTGAAG
CAATGGATACTACAGATAGTACTCCGAAAAAGTTATCTTTATCCAAACCG
CCTGCTCAAAAGGACGAAAAACCTGTAATCCCTAAACCTGAACCAATTAA
AATGAGTAGATCAAGTTTGATAGCCAATGATATGAAAGAGATCTTTTCTG
GACTTCCATTAGAGCCACCAAAATCGATCTTTGACGATGATAGCGATTTC
TTCGAACAAAGGTTAAATACAACCATACAAGGTATCATAAGCCCTATTGA
TTCTTCACCCAATATCTCCAACTTTGGTTTAACACCTACCCCAACCACAC
AGAATGACGTCACAACAGTTTCTGCTCTTGTGACAACTTCTTCACCCTTT
GCATCATCAGCTTTAACTACTACGAACACGACATCTGGCTTGCTTTCTTT
TACTCAAGATATACCTCCTCCTCTCACCACTATCACAACTTCAAGTTCCA
ATGAAACTATATTACCTAAACCTATTGCATCACAATCTGCCTCGTGTAAA
CCGGTAGAAAGTTTGAAGGAAGAAATCAAAACCTCTCCAACTACAGCTCC
AACTCTCGCCACCAATTTTCCAGCCCCAGCTCTCCTCACCAATCTTCCAG
CCAGTCTCGATTTGCATGAAGAAAAGCCAGAGCCAAAactaaaaaacact
aaaataccTTTGCAGTCGCAAGTCCAACCTCTTCCTCCAATTGCACCTGT
ACCTCAAACTAAACCAGATAATCTGCTATCTCCTCCTACAACTACGACAA
TCTCATTGCAAGAGCCACCACTGATCACTACAACCTTCAGTCATCCTCGT
GATGTGAATTCAGCAGTACCATCAACCGTTAACGCTATCCTAACAAGGAC
AACCAGCATTGACGCACCACCGTTCGATCATATTTCAACAATGATACCGA
ATGGACCTCCTCCACCCTACTCAATGAACAGTAATATGAATCAGCTTCAA
CACTATTCAAATCAACAACCTTCTCAGAAGCAACAACAACCTGTTAATAT
GTTACAGGATCAGCAATATAAACAACAGCAACCACATTTGAATATGAACT
TGAATACTCGGAATGATATGAATGCACTTAATTTCCACCAACAAATTCCT
CCACCATACACACATCACCCAGGCATGGGATTCCCACCAACTACCAATAA
CTCCTTTCCACCAACAACCAACCCTGCGTTCCCTCACATGTCTCAAATTC
CTCCTCCGATGGTGAATTTGAACCATCATAATAGACTGCAGCAACCAATA
CATTTTAATCACGAACAGTCTTtagatttttcatcaaaacaacctcaaca
acaacaacagacatTGTTACCAGAATCCAATAAACCCTCAAATAATTCTT
TAAAACCTCAGGCCACTGTACCTCCTCTGAATTTCAATCGTGGGCAACCT
CCAGTTAATCCATCAGACAATATGGAATTGAACTTTACTCCGTCAGCTCC
AATGACAAGCACCAATAAtatgcaacaacaacaacaacagcagcaCCATA
ACAACAATTACAGTATGCCTTCAAACCAACCTCCTTTTTTCGGTAATTTT
CCTGACCAAAAACAAGCACCACCTCAGCCACCAACTACTGCAGATTTGCC
CTATTCTTCACCAAAGATGGAAGATATGGACATTTCATCTGATGACCAGA
CTCCTTTCAAGCAAGATACTTCAACCATCCATCCGCTACATTCCCTTCCA
GGTATACCTCATCCACAATCAGTTCATGGTATGCCACCTACCCACACTAT
GAGTAA Coding sequence (CDS) from alignment at sc0000299_pilon:208740..211495+ >XLOC_034891 ID=XLOC_034891|Name=XLOC_034891|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5148bp|location=Sequence derived from alignment at sc0000299_pilon:208740..211495+ (Clytia hemisphaerica_ch_hm2_pilon)
ccaaATACAAACAAAGAAGCTGACCCACCAGACAAGATAAAAAAGGAATT
GCCAAGCAACAATAATAATTATCTAACAGAAATACCAATTGGCGTTAATG
ATAATACCACAAACATGATGGGTTTGAAGTTCCCCGAAAAATCCAAAGAA
ATGAATCTGACATCGGTAGCGGTGAAAGAAGAAAACACAGGACTGATGAA
GGGAGCTAGTAATGGTTTAGACTTGATGGACATTAATTCGCATCCATTTA
CCTTGGGCTTTTCACTTGGATCATCCCCTGAAAAACCTATTAGTCCTTTA
GACAACATGAACAGTGACATGAAGTTGTTTGAGGACATTGATAATTTTCC
AATTGCAAATTCACATGATAATTTCACGGTTGACGATTTGATTGGTAAAG
AGTTGTCTGATCTTGAAAAAGATACGACTACTAATACTTCAATGAGCGAG
TCCGAAGACCGAAGTGCATTTGATTCTTTCCAACAGAGTGACATTAATGA
TTCTCTTGTGTTGCACAAAAAGAACAATTTGTACAGTAAAGACAGCAAAA
AAGCTGAAAGTCAACAAAATGACTTGAATAATAAAAACTCTACTTTATCA
CAAGATAAAAAGACTGACCAACGCAATAAACTATCTTCAAAAAGTAACGA
AACTAAGGACAAATCAAAGAGTAAAAATACAAGGATAGAGGGTATGAACA
CGGCTTCAGCATCTGTAAAAGTGAACTCTGGTTCTAATGGTGGCCAACCA
TTCAAAACGAAAGCTCAGTTAAAGATGCCCGTAGCTGATAATACTAATAA
AGAGACTGAAAAACCTAAAAGTGTTGGAAAAACTAGGCGGCAATCGTCAA
GGTCTTCTGTTcgaaataaagataaaaaagaaaaacaatctaCTACAAGC
TGTAAAGGTAGAGAAAGCTTAACGAAAGAGCCTGAAAAGGCTAAAGTTAT
TGAACAATCTGAGGATGATGTTTTTGGTAGTATTTCTGAATCGTCTGAAG
CAATGGATACTACAGATAGTACTCCGAAAAAGTTATCTTTATCCAAACCG
CCTGCTCAAAAGGACGAAAAACCTGTAATCCCTAAACCTGAACCAATTAA
AATGAGTAGATCAAGTTTGATAGCCAATGATATGAAAGAGATCTTTTCTG
GACTTCCATTAGAGCCACCAAAATCGATCTTTGACGATGATAGCGATTTC
TTCGAACAAAGGTTAAATACAACCATACAAGGTATCATAAGCCCTATTGA
TTCTTCACCCAATATCTCCAACTTTGGTTTAACACCTACCCCAACCACAC
AGAATGACGTCACAACAGTTTCTGCTCTTGTGACAACTTCTTCACCCTTT
GCATCATCAGCTTTAACTACTACGAACACGACATCTGGCTTGCTTTCTTT
TACTCAAGATATACCTCCTCCTCTCACCACTATCACAACTTCAAGTTCCA
ATGAAACTATATTACCTAAACCTATTGCATCACAATCTGCCTCGTGTAAA
CCGGTAGAAAGTTTGAAGGAAGAAATCAAAACCTCTCCAACTACAGCTCC
AACTCTCGCCACCAATTTTCCAGCCCCAGCTCTCCTCACCAATCTTCCAG
CCAGTCTCGATTTGCATGAAGAAAAGCCAGAGCCAAAactaaaaaacact
aaaataccTTTGCAGTCGCAAGTCCAACCTCTTCCTCCAATTGCACCTGT
ACCTCAAACTAAACCAGATAATCTGCTATCTCCTCCTACAACTACGACAA
TCTCATTGCAAGAGCCACCACTGATCACTACAACCTTCAGTCATCCTCGT
GATGTGAATTCAGCAGTACCATCAACCGTTAACGCTATCCTAACAAGGAC
AACCAGCATTGACGCACCACCGTTCGATCATATTTCAACAATGATACCGA
ATGGACCTCCTCCACCCTACTCAATGAACAGTAATATGAATCAGCTTCAA
CACTATTCAAATCAACAACCTTCTCAGAAGCAACAACAACCTGTTAATAT
GTTACAGGATCAGCAATATAAACAACAGCAACCACATTTGAATATGAACT
TGAATACTCGGAATGATATGAATGCACTTAATTTCCACCAACAAATTCCT
CCACCATACACACATCACCCAGGCATGGGATTCCCACCAACTACCAATAA
CTCCTTTCCACCAACAACCAACCCTGCGTTCCCTCACATGTCTCAAATTC
CTCCTCCGATGGTGAATTTGAACCATCATAATAGACTGCAGCAACCAATA
CATTTTAATCACGAACAGTCTTtagatttttcatcaaaacaacctcaaca
acaacaacagacatTGTTACCAGAATCCAATAAACCCTCAAATAATTCTT
TAAAACCTCAGGCCACTGTACCTCCTCTGAATTTCAATCGTGGGCAACCT
CCAGTTAATCCATCAGACAATATGGAATTGAACTTTACTCCGTCAGCTCC
AATGACAAGCACCAATAAtatgcaacaacaacaacaacagcagcaCCATA
ACAACAAccaaATACAAACAAAGAAGCTGACCCACCAGACAAGATAAAAA
AGGAATTGCCAAGCAACAATAATAATTATCTAACAGAAATACCAATTGGC
GTTAATGATAATACCACAAACATGATGGGTTTGAAGTTCCCCGAAAAATC
CAAAGAAATGAATCTGACATCGGTAGCGGTGAAAGAAGAAAACACAGGAC
TGATGAAGGGAGCTAGTAATGGTTTAGACTTGATGGACATTAATTCGCAT
CCATTTACCTTGGGCTTTTCACTTGGATCATCCCCTGAAAAACCTATTAG
TCCTTTAGACAACATGAACAGTGACATGAAGTTGTTTGAGGACATTGATA
ATTTTCCAATTGCAAATTCACATGATAATTTCACGGTTGACGATTTGATT
GGTAAAGAGTTGTCTGATCTTGAAAAAGATACGACTACTAATACTTCAAT
GAGCGAGTCCGAAGACCGAAGTGCATTTGATTCTTTCCAACAGAGTGACA
TTAATGATTCTCTTGTGTTGCACAAAAAGAACAATTTGTACAGTAAAGAC
AGCAAAAAAGCTGAAAGTCAACAAAATGACTTGAATAATAAAAACTCTAC
TTTATCACAAGATAAAAAGACTGACCAACGCAATAAACTATCTTCAAAAA
GTAACGAAACTAAGGACAAATCAAAGAGTAAAAATACAAGGATAGAGGGT
ATGAACACGGCTTCAGCATCTGTAAAAGTGAACTCTGGTTCTAATGGTGG
CCAACCATTCAAAACGAAAGCTCAGTTAAAGATGCCCGTAGCTGATAATA
CTAATAAAGAGACTGAAAAACCTAAAAGTGTTGGAAAAACTAGGCGGCAA
TCGTCAAGGTCTTCTGTTcgaaataaagataaaaaagaaaaacaatctaC
TACAAGCTGTAAAGGTAGAGAAAGCTTAACGAAAGAGCCTGAAAAGGCTA
AAGTTATTGAACAATCTGAGGATGATGTTTTTGGTAGTATTTCTGAATCG
TCTGAAGCAATGGATACTACAGATAGTACTCCGAAAAAGTTATCTTTATC
CAAACCGCCTGCTCAAAAGGACGAAAAACCTGTAATCCCTAAACCTGAAC
CAATTAAAATGAGTAGATCAAGTTTGATAGCCAATGATATGAAAGAGATC
TTTTCTGGACTTCCATTAGAGCCACCAAAATCGATCTTTGACGATGATAG
CGATTTCTTCGAACAAAGGTTAAATACAACCATACAAGGTATCATAAGCC
CTATTGATTCTTCACCCAATATCTCCAACTTTGGTTTAACACCTACCCCA
ACCACACAGAATGACGTCACAACAGTTTCTGCTCTTGTGACAACTTCTTC
ACCCTTTGCATCATCAGCTTTAACTACTACGAACACGACATCTGGCTTGC
TTTCTTTTACTCAAGATATACCTCCTCCTCTCACCACTATCACAACTTCA
AGTTCCAATGAAACTATATTACCTAAACCTATTGCATCACAATCTGCCTC
GTGTAAACCGGTAGAAAGTTTGAAGGAAGAAATCAAAACCTCTCCAACTA
CAGCTCCAACTCTCGCCACCAATTTTCCAGCCCCAGCTCTCCTCACCAAT
CTTCCAGCCAGTCTCGATTTGCATGAAGAAAAGCCAGAGCCAAAactaaa
aaacactaaaataccTTTGCAGTCGCAAGTCCAACCTCTTCCTCCAATTG
CACCTGTACCTCAAACTAAACCAGATAATCTGCTATCTCCTCCTACAACT
ACGACAATCTCATTGCAAGAGCCACCACTGATCACTACAACCTTCAGTCA
TCCTCGTGATGTGAATTCAGCAGTACCATCAACCGTTAACGCTATCCTAA
CAAGGACAACCAGCATTGACGCACCACCGTTCGATCATATTTCAACAATG
ATACCGAATGGACCTCCTCCACCCTACTCAATGAACAGTAATATGAATCA
GCTTCAACACTATTCAAATCAACAACCTTCTCAGAAGCAACAACAACCTG
TTAATATGTTACAGGATCAGCAATATAAACAACAGCAACCACATTTGAAT
ATGAACTTGAATACTCGGAATGATATGAATGCACTTAATTTCCACCAACA
AATTCCTCCACCATACACACATCACCCAGGCATGGGATTCCCACCAACTA
CCAATAACTCCTTTCCACCAACAACCAACCCTGCGTTCCCTCACATGTCT
CAAATTCCTCCTCCGATGGTGAATTTGAACCATCATAATAGACTGCAGCA
ACCAATACATTTTAATCACGAACAGTCTTtagatttttcatcaaaacaac
ctcaacaacaacaacagacatTGTTACCAGAATCCAATAAACCCTCAAAT
AATTCTTTAAAACCTCAGGCCACTGTACCTCCTCTGAATTTCAATCGTGG
GCAACCTCCAGTTAATCCATCAGACAATATGGAATTGAACTTTACTCCGT
CAGCTCCAATGACAAGCACCAATAAtatgcaacaacaacaacaacagcag
caCCATAACAACAAATTCCCTTCCAGGTATACCTCATCCACAATCAGTTC
ATGGTATGCCACCTACCCACACTATGAGTAAATTCCCTTCCAGGTATACC
TCATCCACAATCAGTTCATGGTATGCCACCTACCCACACTATGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000299_pilon | genome | sc0000299_pilon:208740..211495 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2509-2574:2691 |
| Aaloc | 1-2505:1 |
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