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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000299_pilon:225105..229756- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034890 ID=XLOC_034890|Name=XLOC_034890|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4652bp|location=Sequence derived from alignment at sc0000299_pilon:225105..229756- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTACAAACAATTTGCATCTCAATTCTGATTCTGTTAGTCATGAA
CTTGACTTTCACGCAAAACAGACGCCTTGAAGATGAATTTTGGCAAGAGG
GAGAGGGAGATTTTCCAAGAGGAGAAACTATGATTGAAAGACTCGATGAT
ATCACCAACGAAGTCAGAGATATCAGGTATCATGTCTATGGCCCGTAGGA
AACAATTTTAATTCTTAAAGGATGCAAAAATTTTCAAGTGTGTTTGAAAC
CGCGACGAAATACTAACGTGGACATGAATATCACATCAAAAGCAAACGAA
ATTTAGAAGGGAAATTCTAACACAATTCCGGTTCTTCTTAGTTCCAAAAG
TGCTCGATGATATCTTTTATATGTAGCTGTTATAGCTATATAAAATGACT
TGTAGATCTTGGAAATTATAGGGAAACAGTTACTTCCATACAGCTCTATA
GTAACTGTTAGGAAAACAGTTAAGGCTGTACTAAACTGAAAACATCTGAT
TCATTGAAGCAAAGGTGGGGGGAATTTATCATAACGATTAGAAAACAGTT
ACTTTCGCTAATTATATAATATGTTTTTGAGGACAACCGATCACAAAACT
TTGATATGATTTGCGTCGTATCTATCAGCAAAATAATCTTATTTCTTTTT
CTTAGAAAATTCTAAATTTTGCGCTATGGAGAGCTTTATTAGGATTCTCC
TTTCACTTTCAGTATTCTTAGAAATGATATAACCCAACAGTCATACAAAT
AGAATTGGATATCTTAAGTTGAAAGAAACTAGAAAGGACATATTGTATGG
TGTACAATGGTGTACAATATGTCCTTCCTAGTTTCTTTCAACTTATTCTA
TTTGTATGACTTATATCAATTCTAAGAATTCTCAGACCCGCTGGGACTCC
TTCCCACTGAAAAAATTGGCCAAAATATCTTCCCCAGTGGAAAATTATAC
TTCAATTTTTGTCCCCACTGAAAATAATCAGAAAGAAAATCCTCACTGCA
AAATCTTGTGCTATTTCTTCTATCCCCACTGAATTTTCTGACTCGAAAAC
AATGGAATTCAGATCTCAGGCATAAAAAAACATAGGAATATCAATCCCCT
TCGAGTTATGGTCCGTTATGTTTACCCCCACTGGCTGAAAAAATCCTACC
GGGTCTGTGAGAAGGGGGTGCTCTTGTATTTTTTTTCAATTATTGTTAAT
ATCTTACAAGTAGGAGTGTGTCTTTAAGATTTTCTTAACTTCTACTTAAA
TTGGCTCGTACAAATATTAAACTATCCTCCCACACACAGCTGTAAAAACT
TTGCAAGGGTTTCTTAAAATAATATTTTGATACTTGAGAAGATTAAGCGA
TACTGTCAGGATCTAATCAAGGTGTGGTAATATTGGGTTCTCGAAAAAGA
CCGAAAAGGTAATTTAGTGAATTTAGTGACAACATGGAAACTTTCACTTT
CGCAGGGAAGGGTTGAGAGATAGTCCAATAGACGAACAGTCTGATTCTTA
CGGAGATAATAGCAACGATGACGAAAACTATGGAGATAATAATGAAGAAG
ATAACGATGTAGAAGAATTGAAGAAAGATGCAATGATTAAGAAAGCCAAA
AGTAAGTATGACTCAATTTCTACACGTTCAAATTGCGCTGTGTATAATAT
GCCTTAGAGGGTTTGACTTGAAAGTTTGAGTTACCTTATTACATGAAAAT
AGGTACTTAACGGCCTTGAGGTTAACACGAATAACTAGGACGATGGATAG
GATATCCATCGGCACGAAATTTAAAAAGTCAAATTTTTGCTTCATTTCTT
TTTGCTGGAGAATAATTAAAGTTGCCTATCTAGCCCTTCGGGCTTTACAG
ATCTGTGGTGTTAAGTACGAAAGGCATGTCTTGGCCAAAGAAACAAAAGT
CCGTAAAACTAGAATGAAATTTCAACCTTTTTGAGGAAAAAAAACCTAAA
TCCTTGAGGTTTCTGTATGTCCTAGGCTTATTTGAGAAGATTTTCTCCGC
ATTCCTGCCTATAGTTGTTGAGTACGAAGAAAATCCAGGCTAAATTACTT
CCTACGCTTTCATCGAATAATTGTTGCTATAGCAACCATCACAAACAGTG
GCTAACGGGAAGTTTGTATTCGAATAGCATATTACATTATATGTTGAAAT
TAAAGTCGATTAGATTTTCGATTTATTACATATAGTGGAAAACCTTTTAA
CTGAATTAATCTTCTAAATTTGGTTATATTGCAGGATGTTTGTTAGACTG
TGATATCTTTAGAGAACAGGTTACGAAATGTGTCGTGTAGAAGCTAAGAA
ACTTTAAATAAAGCTGCTAAAACAAATTCGCTATATACAATAAAAAATGA
ACTAAATTTGTTTTTAAAGCAAAAGTAAGGTTCTCTTGATTTTCATTTCG
TGATATTGGTTAAAGGATAAGAGGCTCGAATTTTTGGGAACATTTTGAAA
AGGAAGATGCTGATAGTTTGTTTGTTGTTGTTTTTGGGTCAATTCTTAGG
TATTTTTTTCACAACTTTCAGATTAAAAAAAAATCTTACTTACTCCCGTA
ACAACGTGGTAACCTCGATGTAATTTACTAATTTTCTATTGGATTTTGAA
TAAATGTTTATTTTTATTTCACTAAATATTACCAACAGAGTAACCGGTTC
ACAAAGGTTCACAAAGGTTTTCTTGCGTGTGGTACGTACTTATAATGTTG
ATCATGCACTTTTCATTTCTTTGTAGAGGCATCAAGCAAACACATCCAGT
ATGAAGACCCCAAACTAACGGTATGTTGTAAAGTACTTTTGCAGTCATTT
GCAAACCATCAACCCATATGAAAATTAGTTAGGCAATTCAATGAAAATAA
AAATGTTTACTTTTAGCAAGCGCTCTGTTATTTTAGTAGTAATACTGCAT
ATTTTAGTGATCTTTGAACCAAGAAAAAGTCAAAATCTATGGTCGTGCTT
GTGGTATTACTCTTCAGTATCCTGCCAACTAACTGAAATATTTACTCTTT
TTCATTTACCATAGAAATACAAAGCCTTTTTGATGAAACTATCACAAGTC
AATGATTATGAAGATTTCAAGAGAACATTCAAAGTCAGAGGTAAGCCTCT
AAATGACACCAATGTTTTCGAACTAAAAACCTCCAAATAGAAGAACTTTT
GGTTAGGCTTAGGGCCCGTTTACATGGATTTTCGGTACGGGGCGTACTGA
AATTTTTAGGTATGGTCTACGGTCTGAAGTCTCATATCGTTTACATGCTA
GATTGTTCTGAAATTTCAGTACGCCCTAACTTTCGTTTCGGTCAAAAAAA
CCGAGCCGAAAGTTCAGTACGGTCCAGAAAATCCATCCGGCCTGCTATAG
TACTACGACCACCCTGAACCAAAATCGAAAATTCAGCCCGCACCGAAACA
CCTTAATGTAAACAAGAAAGTAACTCAGATCGTACCGAAAATAAATGTAA
ACGGGCCCTTATAAACAAGATACCAAAATGTTATACAACCAAAAATACAT
AACTAAACAAATCACTTCAACTAAAAGACTTAAAATGGATTTCTTTCTCC
TCTTTAGAACCAGTAACATTCAAAAGAACCAATCAGATACCAATGGGTAA
GAAACGCCGTATAATCAATCACACTTGTTGTTACTTTGTAGAATTAAAGC
TTGTTAAAAAAAAAAGTTAAATCAATGTAAGAATTGATCAAGTTTTTTAG
AAGTAGAAGTTACTTTGGACTGCAGGATAGCTCCTTCCTCGAAAAGGATA
TCTAAGTATAAAGCAAAAATTATGCTCAGCTGGGGGTAAACTACTAGCTG
CATGTTTAGTCAGCTTACCTGAAATTTCTTTCTTTTCAGCTCCAATGAAA
GTACCAGAATGCGACAAACAAGCACCGAAGCTGGTGACAATGCCGATTGA
CTTCACCTCATCCACTCACTACATCTATCCGGATTGTTTGGAAGTGAAAC
GATGTACGAATGTTGGTTGTTGTAAATTACCAAATCAAGAGTGTGGCGGT
AAAACAAAAATCAAGAAGCAAGTCAGAGTTTATAAAATTGATCACTGTAA
GTTTGCTAAATTCCCCCTAAATTCATGATATGCACCACTGCAATGACTTC
ACGAATTTTTGCAATTTTTCTGTTTATGTTCCACCCAATACGTCACTTTT
TCTATTATTGTTTAAAAGTGACGTATTGGGTAGCGAGCACCTAACTAAAA
ACCGGGAATTTTCATCTCGTTTCTTAATAGCGAGTTTATGTATTCGAGAT
AAATCGAGGGCGACGGTAAAAAGCAAAGCTGACATGGAGCCAAAATCGCC
GTCCACTTTGCTCGACGACGGTAAAAACACCAAGATACCGTCGTCTGTTT
AGGTGAGCAAAGGCGATATAGAGCCGTACATGAACTATCGACTTTGTTTT
GTATCGACTTTACTTACCGTCGCCCTCGATATCCTCCGATAAATAAACTC
GGTAATGAGTTCCACTTTGACGATTTTCGAAAAATAGAAGCCTTTCAAGT
GCTTTGACGCAAATTCGATTTTTTCGCTACTGCAGGAGCTTCGAAAGTTA
AAAGTGACGTCAAAAAATCGAATGTTTAGAGCCCGAAAACCCGGGCTCAA
AACATTCGAAAAAGTGGCAAAGTGGAATAGACCAAAGTGGAATAGGCGTT
AA Coding sequence (CDS) from alignment at sc0000299_pilon:225105..229756- >XLOC_034890 ID=XLOC_034890|Name=XLOC_034890|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1620bp|location=Sequence derived from alignment at sc0000299_pilon:225105..229756- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTACAAACAATTTGCATCTCAATTCTGATTCTGTTAGTCATGAA
CTTGACTTTCACGCAAAACAGACGCCTTGAAGATGAATTTTGGCAAGAGG
GAGAGGGAGATTTTCCAAGAGGAGAAACTATGATTGAAAGACTCGATGAT
ATCACCAACGAAGTCAGAGATATCAGATGGCATTACAAACAATTTGCATC
TCAATTCTGATTCTGTTAGTCATGAACTTGACTTTCACGCAAAACAGACG
CCTTGAAGATGAATTTTGGCAAGAGGGAGAGGGAGATTTTCCAAGAGGAG
AAACTATGATTGAAAGACTCGATGATATCACCAACGAAGTCAGAGATATC
AGGGAAGGGTTGAGAGATAGTCCAATAGACGAACAGTCTGATTCTTACGG
AGATAATAGCAACGATGACGAAAACTATGGAGATAATAATGAAGAAGATA
ACGATGTAGAAGAATTGAAGAAAGATGCAATGATTAAGAAAGCCAAAAGG
AAGGGTTGAGAGATAGTCCAATAGACGAACAGTCTGATTCTTACGGAGAT
AATAGCAACGATGACGAAAACTATGGAGATAATAATGAAGAAGATAACGA
TGTAGAAGAATTGAAGAAAGATGCAATGATTAAGAAAGCCAAAAAGGCAT
CAAGCAAACACATCCAGTATGAAGACCCCAAACTAACGAGGCATCAAGCA
AACACATCCAGTATGAAGACCCCAAACTAACGAAATACAAAGCCTTTTTG
ATGAAACTATCACAAGTCAATGATTATGAAGATTTCAAGAGAACATTCAA
AGTCAGAGAAATACAAAGCCTTTTTGATGAAACTATCACAAGTCAATGAT
TATGAAGATTTCAAGAGAACATTCAAAGTCAGAGAACCAGTAACATTCAA
AAGAACCAATCAGATACCAATGGAACCAGTAACATTCAAAAGAACCAATC
AGATACCAATGGCTCCAATGAAAGTACCAGAATGCGACAAACAAGCACCG
AAGCTGGTGACAATGCCGATTGACTTCACCTCATCCACTCACTACATCTA
TCCGGATTGTTTGGAAGTGAAACGATGTACGAATGTTGGTTGTTGTAAAT
TACCAAATCAAGAGTGTGGCGGTAAAACAAAAATCAAGAAGCAAGTCAGA
GTTTATAAAATTGATCACTCTCCAATGAAAGTACCAGAATGCGACAAACA
AGCACCGAAGCTGGTGACAATGCCGATTGACTTCACCTCATCCACTCACT
ACATCTATCCGGATTGTTTGGAAGTGAAACGATGTACGAATGTTGGTTGT
TGTAAATTACCAAATCAAGAGTGTGGCGGTAAAACAAAAATCAAGAAGCA
AGTCAGAGTTTATAAAATTGATCACTTGCAGGAGCTTCGAAAGTTAAAAG
TGACGTCAAAAAATCGAATGTTTAGAGCCCGAAAACCCGGGCTCAAAACA
TTCGAAAAAGTGGCAAAGTGGAATAGACCAAAGTGGAATAGGCGTTAATG
CAGGAGCTTCGAAAGTTAAAAGTGACGTCAAAAAATCGAATGTTTAGAGC
CCGAAAACCCGGGCTCAAAACATTCGAAAAAGTGGCAAAGTGGAATAGAC
CAAAGTGGAATAGGCGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000299_pilon | genome | sc0000299_pilon:225105..229756 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 691-810:121 |
| Aaloc | 484-687:812 |
| Aaloc | 445-480:1094 |
| Aaloc | 367-441:1639 |
| Aaloc | 325-366:1925 |
| Aaloc | 178-321:3197 |
| Aaloc | 1-174:4653 |
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