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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000299_pilon:404953..410509- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034883 ID=XLOC_034883|Name=XLOC_034883|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5557bp|location=Sequence derived from alignment at sc0000299_pilon:404953..410509- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGGCCTCACCATTGTTTTTATATCATCTTATATTAATATCATGGAG
TCTAAGAGGAGAAGCATCATTTACCGGTTGGAGCCAACCCAAACAAAAGT
CAATTCGCACAGACAAAGGTTCAGTAGTCAACACAACCTATGCTATATAC
AAAAGAAATCCTTTACGCTGCGCGATAAATGGATTTTACGAAGTAATATT
TGAAAGAACCATGGCTGAGTGCGCTCAAAGTTGTACTGACGACAACAGGT
GTTTAATGTGGTTTTTCCATAAAAATCAACACCAATGTAAACTGTATAAA
TTTACTTTATATGATTTGCGACTGCGAAGTATGTACAACCCTCATATGAC
GTACATTGACAGCTTTGAGCTTAAGGTAAATTCTTTATTGCTAAATTTCG
CACCCGTCCGGCTGACTCAAAATAAAAATATAGTACAAGTACATGCGATA
TTCCATTTCAGGAAATTGAAAAGGTTAATATTGGGTGATGAAGTCCATCG
AAAGTTTTACTTCATTCGTTCGATTTAAAGCGTGTAAAAACACCTTCATG
ATTGTATTTATCCTAATTCGCCATTTTTTCCGTTCGAATTAGAACTTTGA
TTTCTAAAAAAAATTTCTTCTAGATAACACCTGACAGTAAGAACTTCCAT
ATTTGTCCCGGCTTACTTTCAAACCAATCGCAAGTGTCGGTCGCTGATGT
TCTCTATAATTCGATATTTTCTGATGATAATCGAAGAGAGAGTCAATTGT
TTTTTCAGATTTTCATTCTCACATTCTAGCTCAACTGGAAGAATGACAAA
AGTGAACAAAATAGGTTTCAAATAAAGCCATTATTCTACCATTTCAGAAT
CCTTGCACAGAGAATGCAAATTTATGTGAGCATGGGAGTTATTGTGCGGC
AGATCGGCCAACAGAAAGCTATGAATGCAAGAACTGTTTGACACCCTTCA
CCGGTCAACACTGCAACGAAACTGCAGGCGATGGTAAGTTTAATAAAAAG
TTTCTACAGTTGAGCTTCCAGAACTCAAACCTCTGTCTCCTTAATTCGAA
TATGTTTTATTTTCCCCTCACTAAACATTGCCTTATAAACCAGTCTTTGC
AGCTCAAAAAATCCACAACTCTAGCAAATGAAAGCTCGCCGTGTGTGTTC
GAGTTACAGAGATTCCACCTTATTATTTTCAACAGAAAGCTAAGCTTCTT
TCAAAATAAGAACCAGTAAATTTTGGCTCAGAGGCTTTGGAAATCTCCGG
GTTTGTTGTTCTTACAATGTTTTCAATAAGCGTGAAGTTTTTCTTTGATT
TCATTACTTTTTTTAGATAACTTTATCAGTGCGACAACAACTGATGGTAA
GTTTGATTGGAGACCTCTTTTTCACATACAAATTCATTTCTGGTGTGGAT
CAATGTCGTGTGCCTACGTACTAAAAGAGCTGTACCAATCTCCACCATTT
CAATTTCACACCCTTCGAACGCCTGAAAAATCTCTCGCATGTTACTTCTA
TATTGAAAAACAAGGCCTGTCACAATCTACGAGCGGATCCCGATTACTTT
ACGCACGGCGCGCACTTATACGGATATAATTGTTTAAATGAATTGGTTAA
AGAAGCTAGTCAGATCATCACATTTGCTGAATCTATTTAGATTCATCTGT
TGTGAGATTTCTCTCAGGTACCTAATAAGGGGGGGGGGTTGGAAAAATCT
CAAAACTTCATTAGCCGCGGGGGGGGGGGGTTGGAATAAAAATATCCTGG
GTGGAATATTTTTGAAAAGGAGGCTAATACAGCAGAATTAGGACAAAAGA
GGGAACTTTCCAAAAACATTTTCCCAAAAATTAGTAAGGTAGGCCATTAG
GTACCCGAGAGTAGGCCTTTCACAAACCTTCTACCGTGGTAAGTAATAAC
CATTCCCCTCTAACTCTGCCTTTATAGATATATTATTTGGCCGTGCGGTC
TCTTGTCGTCATTTACGCCACTATAGCAACATCCCCGATTCGGATCACAC
TGTCCAATACATACACCCTTGGAGAGATGACCGAAAAATCAAGGTGCTTT
GTAAAGGTATGTTGTTTTTTAAAGCTCTTTTTTAAAGTTTGGTTTATACA
AGAATTTATTATAGACACTGGATAACCAACGAGATATATTTTCATTGATT
TCTCATGTTCTAGCCTTGTCCGCAGTAATGACATTATTGTTCACTCTCCT
TCCTTCATTAAACGATTTTTCGTAACATTTTAATCGTTTTTTTCATCTTA
ACACAGTCATTTCAATTCCCAAATGAAAATTAAGTTTTCCTTAGAGAGGC
GAACGCATCAAAATAATTGCTAATTACGTGTCGTTATGACGTTTCAAGTT
GCAAGAAAGATACCAAAAGCATGCTATGTATGAAAAATTGAATGTTGACA
CCAGAAATTTTCAAAATTTAACCTCAATAAAACCACCGATCCACCACGAG
CCTCCAAAATATTTTCATACCACGGTGAAGCCAAGACACTCAAGTGTCAT
ATATGTCGATTTTAGCTCTTCTCGGAAAGATGTTAGAAAGATATTGCCAA
CTTAAAATTCTGTGTCATTTTAGGCCTTTTGTTTGATTTTTCTTGTCTGA
TGATGTTTTTGTCACAACAGATTTAATACATGTATTCGTTAAGCATTTTA
GCATTTCCAAATTTTTGGCGAGTAAAAGTACAACAAGCAATATGCTGAAT
GGCCTACCTTACCTGATGATTAAAGTTAGATAGCAATGCGAAAAGAAAAA
TGAAAAAAATCAGTCAGAAAATATAGCGTTTAGCGAAAATACACAACACA
ATAAATTCATCATTGATTGTTGATGGGGGGAGAGGGAAGGGTTGTAGGGA
AATAATAAATAGGAAGTTCTGGTCGCAAAAAACAGTTTTATTGACAATTG
AATCATGCTTGATGGTGAGCATTGTTATGAATAATGTTTTTGTGTGAAAA
GCATAGAAATATAAAACTAAACGGTGATTTCCGGCATTTTCAACCGGAAA
ATTTTTTTCTCAAAAATCGAACTCGGCCATGTTTGGAGCATTGCCAATGC
GCATCTTTCTGCAAAAAATCAGAAAAAACTAGAAATGAAAATTCGAGAAA
ATATCAAAAAACCGATTTTTCCGATATATTTTTTTTTCGAAAATCGGGCT
CCGTCACATTTTAGGTATTGTCATATTGCATCAGTGTGCAAAATTTCATA
AAAAAATATAAAGTACAGCTCGAAAAATTCAAGAAATACTGTCTTTCCGG
CGAAAAAAGGTTGTTCCGGCGACTTTTAAAATAGTTCCGGCTTCAAAAAT
CAATTTTATTGAAAATTGAAACATGCTTGATGGTGGGCATTGCTATTAAT
AATGTTTTTGAATGAAAAAACAACCAATTATAAGGAAAAAGTCCAATGAA
AATCTAGAAAAACGGCGATTTCCAGCATATTTCAGGCATTTTCGGCCGGA
AAAAAAATTTTCTCAAAAATCGGACTAAGCCATGTTTTGGGCATTGTTAA
TACGCATCTTTGAACAAAAAGTCAGAAAAAAACTTATGAGAAAATCTCGA
GAAAATGCCAAAAAAACAAGTTTTTCCGGCATATTTCCGGCATTTTCAGC
AGGAATTGAATTTTTTTTCGAAAATCGGGCTCCATCACAATTTAGGTATT
GACATTTTGCATCAGTGTAAAAAATATAAAGTACAGCTCAAGAAATTCAA
GAAATACGGTTTTTCCGGCAAAAATCGGCTGTTCCGGCGATTTTTAGAAA
ACCCCGCTTCAAAAATCAATTTTATTAAAAATTGAAACATGCTTGATGGT
GGGCAATTGCTATTGATAATGTTTTTGAATGAAAAAATAACCAATTATAT
GGAAAGAGTCCAATGAAAATCCAGAAAAACGGCGATTTCCGGCATATTTC
CGGCATTTTCGGCCGGAAAATATTTTTTCTCAAGAATCGGACTAGGCCAT
GATTTGGGCATTGTTAATACGCATCTTTGAGCAAAAAATCAGAAAAAACT
AATGATGAAATCTCGAGAAAATGCCGATAAACCAGTTTTTCCTGCATATT
TCCGCCATTTTCGGCCGGAATTGAATTTTTTTCGAAAATCAGGCTCCGTC
ACAATTTAGTTATCGACATTTTGCATCAGTGTGCAAAATTTCATGAAAAA
ATATAAAGTACAGCTCAAGAAATTCAAGAAATACCGTTTTTCCGGCGAAA
ATCGGCTGTTCCGGCGATTTTTAGAAAGTTCCGGCTTCAAAAATCAATTC
CATTGAAAATCGAAACATGCTTGATGGTGGACATTGCTATTAATAATGTT
TTTGAATGAAAAAAAACAACCAATTATATGGAAAAAATCCAATGAAAATC
CAGAAAAACGGCGATTTCCGGCGGAAAAAAATTTTCTCAAGAATTGGACT
AGGCCATGTTTTGGGCATTGTTAATACGCATCTTTGAGCAAAAAATCAGA
AAAAACTAATAAGCCAATCTCGAGAAAATGCCAAAAAAACAGTTTTTCCG
GCATATTTCCACCATTTTCGGCCGGAAAAATTTTTTTTCGAAAATCGGGC
TCCGTCACATTTTGAGCATTGCCGTTTTGCATCATTGTGCAAAAAATCAG
AAAAAACTAATAAGCCAATCTCGAGAAAAGCTGGTAACTAACGGACGGAC
GGACGGACGGACGGACGGACAAAGGTTAATTTTTAGGACCTACAGCCCAC
CGGGGTAGGTCCAAAAAGATAAAGATAGAGGACTTTATAGAAATGAGATT
ATTAATAATTTTTAAAAATCAGAAAACTTCGAGCCGCCATGACAGTTGTC
CTTTGCGGACAAAGCTAGACCCTCGATTGTTTTATTAGACAAAAGAAAGA
CAATGCATCGCTCTCCACCGTTTTATACGTTGTTTTTCCAGTATCTATAG
TAAATTCATGGTTTATATACCCTCCTCACAAGGGTGTAAAGTCAGTTTCT
AGGAACGCCAAAAGCAACGTGCTGCAAATGAAAAACTGCTATGCTAATTA
CCCACTACTTATTTAAATCTATATTGTATTAATTTGAGCAATTCTGTTTA
CTTGTAGCAGGATATATGGTTTTGAGCCATGTCAAACAAAACGTCACAAC
ACCAATCAGAGAAATCACCAAAAACGAATTGGCAGACGGTTTGGATTTGA
CAGTACCCAACTTTAGAGCACACACATCGTTTCTCAATGAATTATACAAA
TTGATTGATTTTGATAAATTCCAATTTACGTGTTTGCACCCGAATGGCAC
ACACTTTGGTATTAGTAACCAGTTATGGCTTCACGTCGACTGCGAAAGAC
TAGTCAAATACATGACTGATCATTCAGCAAATGTCATTCCTTCGACACAT
TGCATGACAGGAATCTCTGGTTTCACAGGTATCTATAAAGACAGTGTACT
AGACTCTAAATGGTCGCGATCGGAGACACCGCCTGACGAGCGACTCTTCT
CGAACGTCGTCGTACTAAATGATGGAACTCGATATAATTTTGGTTCGGCT
TTTGAATGCTTCGATCAAGATGGACTTTGGACCGAATTCAAAGTTGAACT
ATGGTAA Coding sequence (CDS) from alignment at sc0000299_pilon:404953..410509- >XLOC_034883 ID=XLOC_034883|Name=XLOC_034883|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2340bp|location=Sequence derived from alignment at sc0000299_pilon:404953..410509- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGGCCTCACCATTGTTTTTATATCATCTTATATTAATATCATGGAG
TCTAAGAGGAGAAGCATCATTTACCGGTTGGAGCCAACCCAAACAAAAGT
CAATTCGCACAGACAAAGGTTCAGTAGTCAACACAACCTATGCTATATAC
AAAAGAAATCCTTTACGCTGCGCGATAAATGGATTTTACGAAGTAATATT
TGAAAGAACCATGGCTGAGTGCGCTCAAAGTTGTACTGACGACAACAGGT
GTTTAATGTGGTTTTTCCATAAAAATCAACACCAATGTAAACTGTATAAA
TTTACTTTATATGATTTGCGACTGCGAAGTATGTACAACCCTCATATGAC
GTACATTGACAGCTTTGAGCTTAAGATGTTGGCCTCACCATTGTTTTTAT
ATCATCTTATATTAATATCATGGAGTCTAAGAGGAGAAGCATCATTTACC
GGTTGGAGCCAACCCAAACAAAAGTCAATTCGCACAGACAAAGGTTCAGT
AGTCAACACAACCTATGCTATATACAAAAGAAATCCTTTACGCTGCGCGA
TAAATGGATTTTACGAAGTAATATTTGAAAGAACCATGGCTGAGTGCGCT
CAAAGTTGTACTGACGACAACAGGTGTTTAATGTGGTTTTTCCATAAAAA
TCAACACCAATGTAAACTGTATAAATTTACTTTATATGATTTGCGACTGC
GAAGTATGTACAACCCTCATATGACGTACATTGACAGCTTTGAGCTTAAG
AATCCTTGCACAGAGAATGCAAATTTATGTGAGCATGGGAGTTATTGTGC
GGCAGATCGGCCAACAGAAAGCTATGAATGCAAGAACTGTTTGACACCCT
TCACCGGTCAACACTGCAACGAAACTGCAGGCGATGAATCCTTGCACAGA
GAATGCAAATTTATGTGAGCATGGGAGTTATTGTGCGGCAGATCGGCCAA
CAGAAAGCTATGAATGCAAGAACTGTTTGACACCCTTCACCGGTCAACAC
TGCAACGAAACTGCAGGCGATGATAACTTTATCAGTGCGACAACAACTGA
TGATAACTTTATCAGTGCGACAACAACTGATGATATATTATTTGGCCGTG
CGGTCTCTTGTCGTCATTTACGCCACTATAGCAACATCCCCGATTCGGAT
CACACTGTCCAATACATACACCCTTGGAGAGATGACCGAAAAATCAAGGT
GCTTTGTAAAGATATATTATTTGGCCGTGCGGTCTCTTGTCGTCATTTAC
GCCACTATAGCAACATCCCCGATTCGGATCACACTGTCCAATACATACAC
CCTTGGAGAGATGACCGAAAAATCAAGGTGCTTTGTAAAGCAGGATATAT
GGTTTTGAGCCATGTCAAACAAAACGTCACAACACCAATCAGAGAAATCA
CCAAAAACGAATTGGCAGACGGTTTGGATTTGACAGTACCCAACTTTAGA
GCACACACATCGTTTCTCAATGAATTATACAAATTGATTGATTTTGATAA
ATTCCAATTTACGTGTTTGCACCCGAATGGCACACACTTTGGTATTAGTA
ACCAGTTATGGCTTCACGTCGACTGCGAAAGACTAGTCAAATACATGACT
GATCATTCAGCAAATGTCATTCCTTCGACACATTGCATGACAGGAATCTC
TGGTTTCACAGGTATCTATAAAGACAGTGTACTAGACTCTAAATGGTCGC
GATCGGAGACACCGCCTGACGAGCGACTCTTCTCGAACGTCGTCGTACTA
AATGATGGAACTCGATATAATTTTGGTTCGGCTTTTGAATGCTTCGATCA
AGATGGACTTTGGACCGAATTCAAAGTTGAACTATGGTAACAGGATATAT
GGTTTTGAGCCATGTCAAACAAAACGTCACAACACCAATCAGAGAAATCA
CCAAAAACGAATTGGCAGACGGTTTGGATTTGACAGTACCCAACTTTAGA
GCACACACATCGTTTCTCAATGAATTATACAAATTGATTGATTTTGATAA
ATTCCAATTTACGTGTTTGCACCCGAATGGCACACACTTTGGTATTAGTA
ACCAGTTATGGCTTCACGTCGACTGCGAAAGACTAGTCAAATACATGACT
GATCATTCAGCAAATGTCATTCCTTCGACACATTGCATGACAGGAATCTC
TGGTTTCACAGGTATCTATAAAGACAGTGTACTAGACTCTAAATGGTCGC
GATCGGAGACACCGCCTGACGAGCGACTCTTCTCGAACGTCGTCGTACTA
AATGATGGAACTCGATATAATTTTGGTTCGGCTTTTGAATGCTTCGATCA
AGATGGACTTTGGACCGAATTCAAAGTTGAACTATGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000299_pilon | genome | sc0000299_pilon:404953..410509 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 673-1170:499 |
| Aaloc | 544-669:3629 |
| Aaloc | 514-540:4240 |
| Aaloc | 376-510:4711 |
| Aaloc | 1-375:5558 |
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