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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000230_pilon:321568..328437- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034877 ID=XLOC_034877|Name=XLOC_034877|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6870bp|location=Sequence derived from alignment at sc0000230_pilon:321568..328437- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTATGGAGACAATGGATGTTGACCTATCAGTGGTCAAGAAAGAACG
AATGGATTTGGACGGAGAATATGGAAACATTTTGGATAATTTCACAACGG
AAAATGAATATGAAAGCTTCCCCAATACTAACTCTATCGTAAGTTTCTTG
TTTTTATGCTACATTCTATCTCGTTTTACTTTCAGTTTTATTTGTCTCAC
TATGCCCCTTGCTATGACTTGAAAATATGTTTTTTCTTTCATTTTTGATT
TTGCTTTTTATAAGAAACTCGGAATTTCAATAGTCTGTAAAAATGACAAA
ATCTAGATAAGGCGGACTATTTAGGATTAGAAGGGAGGAAAATTTCATGA
ATGAATTCATAGAAATGTTTATTTTTTGCTGTTTGTTATTCATCATTACT
TTTAGAACAAATTCGCTAATCCCAGGGATAGATATTTGACTATTTCCGGG
AGGGGGCTTGACAATAGATCGATTGTATTTGTGAATGATGACAGTGATGA
TGATATTATTTGGAACCATAGCATCGAACAAAAATTGTATTCATTCTTTT
AAAACGTTATACCCTCTGTTTGTTTACTTTCAATAATGACATCAAACAAG
ATTTTCTCTAAAAAATATGTCAGCGTAGTACAACTTAACGCTAACGGAGA
AATAAGAGTCCTTGTTTTTCTTGTGGGTAATTCATAAAGTTCAAAAGACT
TGCCGTTTAAGTTGTTTTGTTTATGTTTTGCCCGTGCTAGTGAAACACCA
ACAAATTTTTTTGTGAAGAGCACTTCTCTCAAACTGTCGTCTTTCGGTAC
GACTCTTATCTTTTTTGTGAAAGAAGAAAACAATTCGGTATTTTTGCGTG
CCTTGTAAATCAGCCAAGCGTTTTTTTCTGAGAAAAAGTTTTTCTTTTTC
TTGTCTCTTTATATTCTGATAAAAAATATGTTTTTTGTTGAAAAATTGCA
ACTTTGAATACCGAATCTGTTGCTTTTTTCTAATTTTCATCATACATCGA
GAACAAAACAAAACAACTCCCGTCTTTTTTTCAATCGGAAGTGATTCTCG
ATCACTTTTTGTACTAGTTTCATTCAATCGAGATAAAAATCAATCAAGCC
GGATAAATTAGTCTCGAGTAATTAAGCCAAAATAACTACTCAAAGGAAAA
CCCATTTAATTTTTCTCTTATATAAATCCGACGATTAGTAAAGACGTAAG
ACCTTAACCATCCGTAGAAGGAAAAAAAATGCGTCATTGCCGTACTAAAT
GAGTCTTTTTGGGGTCCTGTTTGTAAACTTTGATAAAATTAACGGCAGCC
ACCGCCTGTAAAGATTTTAAAAATGTCAAGGAATTTTAATTCAGCGGATT
TTTTGGGGAAAATTCAAAAATTTAAAGTGTAGAGATCTTCGTTTTCATAA
ATTGCGCCGAAATTAAGGCCAGAGAGTGTTCATTGACATTGAAAAAACCA
TTTGGGTCTTTCGCAATTATTCATAACCCCTTCACGTGATAAAGTTTAAA
GGAAATTTTCACTTCGAAACTCATGCGAGTGTTGCGGTCTAATAGAGCGG
TTACAGCGAAACTTCACGAAATAACCGTCATGCAAAGCTTTATAACCTTA
TCGTGTCCTTAAACTACACTTGCATTGAAAGAAAAAGCTCGAGATCATGT
TTCCTTATCTTCAAGTCAAGGGGAGTTGAGGCTGTCTGAAATCTACAGGC
ACGGAAATGAACCATAGTTTAAGTTAGGCATATTCGATGTCGATTTTCAA
CTATCAAAACATATCAAAAAGCCGTATGTGTGCGTAAAGTATACTGTGTT
TTGATATGTACCCCTCCTAGAGTGGCAATGACAAACTGAAGGGAGTTTAA
TAACAAACTTTTGGATATAATACAAAAAGATGATAATAGGGGAATCGTTT
TCAAGAGGTGCGAGATCAATAGTCAAAACTCGGCCTTCCTGTAAAATAGC
TGTGCAAAGGGCTAAGCTAGGGCATTAAATTGCGGCCTTATTTACTAGCA
TTTCCTTTTGTTGACTGTGAGAGTGTCCCTGAAAGATTTGACAGGAAAAA
ATAATAACTTTTCTTGTCATAAAATCACGTAATAGAAACCCCCTTAAATT
GTAACATTTTTGAGGAGTGATACTGTTTTAATAACTTGGTTTATTAAGCT
TTTCACCTTTTTATGATAAAGTCGCCAATGAGTTATAAGAATAAAAGATA
CCACCTTCATAAAAAAAGGCAATGCCTGACAGAGGACTTTGTTTCGAACT
GTCAAATCCACAGCTTGATTGGTTAACAGGATTTCATTCATGAATAGTCT
TGCTGTAATTACTCCGACGTTGTAAATTTTCATTAAAAATTGCTTTTTAA
TTTCAACCAATCTTGTCAGAAGAGGAAATACTTTTTTTACTTTACTTGAC
TTTTTTGATAACAGGCCAATAGGAAGTAAATTAAAATACAATGATTTGCG
GGAAAATAATGTTTGCCTCCTTAATTGGTAAAATAACCTTGTATCAAGGA
AGTTTTTAAATCACTGCATATTTCAGCATATTTTAACAAATTCACTATTT
AAAATGCATTTAAGAATAAAAGGAAAATAAAATTGAAGTCCCGAAAAACT
TTTAAAAGTGACATAAAATGACGAGAACAGAAAAAAAAATTAGCTTTCTT
AATTTTCCTGAAACTTAGAAATCAATCCTTTTTTAAATGTTTTGTCGGAG
TTTGATATTTCCTGGAGTAAATGATTAGCATTTCTTTTCACGTCTAAATA
AGCATCGTCAAGAGGGAAGTAGGCGGGACTATGTTGCGTTCAAAGTTTGG
CACATGACATCAAGGTGTGTGTCCGTGACTCTTTCCATGTCCTCCGTTTC
TATGCGACATTTAACCTTGGTAATGCTGTACATTCATTGCTGTACTTAGT
GCTCGGGTTTTATTGCTAATTTAAATGATCTAAACGTCTGTACTCACAAA
AGCAAAGAGACTTTTTTGCAGCATTTATTCATTTTTTCCTTTTCTCATTT
TAGTCTTGCAACGAAGATGAAGACGTGAACGTTGATTGGTTAACCAGCTT
CTTTGATGAACCAACGCACGATAGCCTGTCCGGATTAAACCCACCATTAA
GTGATATCTCGGACAGCGGAACCACTTTTTCACGAATCACATCTATAAAT
TGTACATCTGATATTTTACTCGATTCTTACCCAACTTTCTCTGAAGATTA
TGAAGCTACCATGCCAACATCCGAAACGACAAATAGCACAGAACTTATTA
AACTTTCACCCAAAATTTCGCCGGCAGTATGCAGTAGTAATAACCCATTC
TTATCACAAACACATTGTAATAATAGTAAAGACATTGTTTTAGGCTCGTT
GAAGAGTCATCCAGAACTGATGAAAGTGAAAACAGAGGAGCCTTCTAGCA
TAGAGGAACTACCTACTAAAGAAACAACTTCTCCAACACCAACAACCTTT
CTATCGAATTCTACAGACACCAAACCACAACAAAAACTTTTACTCTTCAT
GAACACCCCTGAAAATCGGGCCAAATTAGCGGGAACAAATTTTAATATCA
TAAACGCGAACTTATTAAGTAAAATATCTGGAAATCAAAATCAAGACTCT
TCTGGCAATAATATTAATTTGAGTACTAGTAATACGAGCAAACAAACAAT
GAATCTAATTAATTTGAAGAAATGTATTAGGTTAAATAACACAGTACGTA
GCAAAGAGGACTCTTTAATTAAACAGACGTCAGATGATACGGTGACGGCT
TCCACTGTTAATGCAACGCTGCAATCCATAATGGCTGCCAATCATCAAAG
AGAGAAGAAAATTTTACCAGTAGATATTTTGAACGGACACACGTATGGCT
TGACGCGCAAGGATAGTCATGATATTGACTCAGGTAAGATTTCAATTCGA
CTGACTTCGGTACTTTTCTGCTATCCGCTTCATTTCGCCTGAATTTCCGT
CGCTCAGACAAATAGTCTTATATATTGTCAAATTGTTTGCAAGCAATTTT
TCAAATTATTTTGGTTTTTTAAGAATGACGGGCGACATAATAACACTCTG
AAACACGACCACACGGAGCTTCGATTTCTCGTTTATATTGGTGGTCTCTA
AAGTATTTTTATCTGACGAAGCCGCAACCAAATTTAGAGTTTTATAGAAA
AACTCTCGAAATGGGTTTTCTAAATAGAGTACATAGGCACTATAAGCAAA
TGTGCCTGGAAAATCTTTAATGTCTTTAATAGATTCTTATACTACTTTCC
AAATGGTAGCTCCTTTTCATAGATACGGAAGCAAATACTATGTTTTCAAA
TATTTCTGAAATTGAGGGTTTCCTCTGAATTTTATTTGAAATTTCAGTTT
TCAACTGTTTGTGAAGTCGAATATTTCTCTTAAATTTCGTTATATGTGCT
TAGCTGCTTTTATAACCTATACGATAATATTGACCTTCATATTATTTCTC
AAAGCATTCTTAATCTATATTTGAAGTTTGATCAACTGTATTTTAAGAAA
ATTAATAGAAAAATGAAGAGGAGAATAAAAATCGGAGGTTGTCGGAGCTA
AATAAAAAAACAATGAAATTCCCACTCGTTTTCTAACGATTTTTGAAACT
CGTGTGTGAAAATTTCGTTATTAGGCAACCATTTCATAAATTTAGAATTT
CGTTACAATAGGAAAGGTGCAAATATCTTTTTCTTCTCTAAAGAAATTGC
TCTTCGTTTCAACGATTTGAAGTTTCGTAGCAACATCGACTTTTTCATAT
CACACTTTTCTGTCATATGTAATTTCTCGTGTAACCGAAAATTTTCAGCT
TCGTTTTCGTTAGCCTCTTTTACTTAAAATTCGAAAAGTTAACTAAAAAA
GAACCAAGTCTTCATTCCTCTTCAAACTAAATCCAGATCCAGTGTCAAAA
CACTTGAAAGGCTTCTATTTTTCGAAAATCGTCAAAGTGGAACTCACTAA
GAAACGAAACGGGGTGAAAAATCCTGGTTTTTGGTGAGGTACTCGCTATG
GTTTCCCCTGCTTTTGCCAAACTCCCGAAAGGCCTTCCTTCCGAACCTCT
CAAACATAGAGGCATATCTGCTATTAAAACTAACTATAAGAACTCTAGAC
TAATGATAGTTTGTCAAGCCTACTGCATTGCAAATTTTGACTAACTTGCC
CATTCACATTTACGAAGATTTGAACTGTAGCGGTTATGAATAGCTTCAGG
TCCTGTAGAGGTGTGGATGCATCACTTTTTATGTTGCTCAACTTGACAAA
AAAGTGATACAACATTAATTGTCCAATCACTGTTCTTCTTTATCACACAG
GTTACGAGTCACCGACATCCTCATCTGGATCTTCACCCTGTTCTCCACCA
ATCGAGTTATCGGATCATCATCGCAAAGATGTCTGCTTATCCAATGAAAA
TATTCAATACATCGATATTGTGAGTAACCAAACCCTTTTTGTTGTAGAAG
CAAAATAGTTACCTCTCCCCGAGCTCCAAATGAAGCCATACATCTCGTTT
GAGATTGAAACTGTATATGGTGTATGGACACTGGTAGCATAGAAGGGTTT
TAAATAGATTACTGCTTCTTACCCTTGTTGAATATGAATTGAATGGTTAG
AGTTACAATACCCTTGAATCGATCATTTCTGCCTGTTGCAAACGTTAAGG
TTCAATTTCTTTCTTTTTTTCCAAACAGCCTCCACATGAACGCCAACCTT
TCTATCTATCTGAAGAAGAGAAGCGTACACTCATCATGGAAGGTCTTCCC
GTACCGCAAGGTTTACCGCTTAACAAATCTGAAGAACGCGCCTTGAAAAA
GGTTCGAAGGAAAATCAAGAACAAGATCTCCGCTCAAGAAAGCAGAAGGA
AAAAGAAAGAATATATGGAATCGTTAGAGAAAAAGTGAGTACTATTTTCA
TCCTAAGCAATATTTTACGCCGGCCTTTATTCAACGACAGCCAAACAAAA
TCTCCAATAAGGGCTGGTGTAAAGAGGGCCGACAAGTAGCTGAATTATCA
TTAATCAGCCTTCGTATAGGTGAATTTGTAAAGGGAAAGGCCAGGGATTA
GAAGGGGAAGAAATTTTACAGGAAAAGGTTAGATGACGTTCCTAAGCAGC
TAAAAACTAACCCCGAAAAATTCGAAAGAATGTAAAAAGGAAAGAAAACT
ATCATCAGTACAATGACTCACGTTTTCTATTTCTTTCATCGGAAAAATTC
TCTTTTTAATCCTTATGGATGACAGGAATTTTTTTAAAACTAGACGTCTT
TGTGTGCAGCCTTACAACGGAAACATTGTAAAACTCTTTGTTGATCCTAT
ATTTGATACACCTAGCAGTCTACTACAATGCATTCTTAATAGCAGTTATT
TAACTACAGAGGTATTCCACTTCCATAACCCATTAGACCTCATTATAGAC
AATACAATCAATGTAATTATACTTTGTTTTTTGTGTTCATTTTCAGCGAC
GCGACGGGGAATTACGAGAGCTCTTTTTCCTTTTCCGATATCGAATTTGT
ATGATAATTTTGCATCAAATCAGCCTGTTTTTTTCTCAATAATGATCGAC
CTTGTCTATTCCACCTACTGTAATGTGAGGGAAATTGTTATATACAGCCC
TGTGTACAGTACACCGGTTCAAGTAATAAAGGGCGTAAAAATCTCGATCA
AGATCCATTATTTTCAACTCGAGCATTTTCCGAGCCTTTCTTTTTCTTCA
AACCGTTGTACCTGACATCTAATCTTTATTTGCTTTTAATTTCCTTCAGA
GTTGACTGTTATGCATCTGAAAACTCAATACTCAAGAAGAAAGTGGGAAG
TTTAGAAGTTGCAAATCGTTCATTGATCATGCAAGTACAGAAGCTTCAAG
CCCTTGTCACAGCAAAGATT Coding sequence (CDS) from alignment at sc0000230_pilon:321568..328437- >XLOC_034877 ID=XLOC_034877|Name=XLOC_034877|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2928bp|location=Sequence derived from alignment at sc0000230_pilon:321568..328437- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTATGGAGACAATGGATGTTGACCTATCAGTGGTCAAGAAAGAACG
AATGGATTTGGACGGAGAATATGGAAACATTTTGGATAATTTCACAACGG
AAAATGAATATGAAAGCTTCCCCAATACTAACTCTATCATGATTATGGAG
ACAATGGATGTTGACCTATCAGTGGTCAAGAAAGAACGAATGGATTTGGA
CGGAGAATATGGAAACATTTTGGATAATTTCACAACGGAAAATGAATATG
AAAGCTTCCCCAATACTAACTCTATCTCTTGCAACGAAGATGAAGACGTG
AACGTTGATTGGTTAACCAGCTTCTTTGATGAACCAACGCACGATAGCCT
GTCCGGATTAAACCCACCATTAAGTGATATCTCGGACAGCGGAACCACTT
TTTCACGAATCACATCTATAAATTGTACATCTGATATTTTACTCGATTCT
TACCCAACTTTCTCTGAAGATTATGAAGCTACCATGCCAACATCCGAAAC
GACAAATAGCACAGAACTTATTAAACTTTCACCCAAAATTTCGCCGGCAG
TATGCAGTAGTAATAACCCATTCTTATCACAAACACATTGTAATAATAGT
AAAGACATTGTTTTAGGCTCGTTGAAGAGTCATCCAGAACTGATGAAAGT
GAAAACAGAGGAGCCTTCTAGCATAGAGGAACTACCTACTAAAGAAACAA
CTTCTCCAACACCAACAACCTTTCTATCGAATTCTACAGACACCAAACCA
CAACAAAAACTTTTACTCTTCATGAACACCCCTGAAAATCGGGCCAAATT
AGCGGGAACAAATTTTAATATCATAAACGCGAACTTATTAAGTAAAATAT
CTGGAAATCAAAATCAAGACTCTTCTGGCAATAATATTAATTTGAGTACT
AGTAATACGAGCAAACAAACAATGAATCTAATTAATTTGAAGAAATGTAT
TAGGTTAAATAACACAGTACGTAGCAAAGAGGACTCTTTAATTAAACAGA
CGTCAGATGATACGGTGACGGCTTCCACTGTTAATGCAACGCTGCAATCC
ATAATGGCTGCCAATCATCAAAGAGAGAAGAAAATTTTACCAGTAGATAT
TTTGAACGGACACACGTATGGCTTGACGCGCAAGGATAGTCATGATATTG
ACTCAGTCTTGCAACGAAGATGAAGACGTGAACGTTGATTGGTTAACCAG
CTTCTTTGATGAACCAACGCACGATAGCCTGTCCGGATTAAACCCACCAT
TAAGTGATATCTCGGACAGCGGAACCACTTTTTCACGAATCACATCTATA
AATTGTACATCTGATATTTTACTCGATTCTTACCCAACTTTCTCTGAAGA
TTATGAAGCTACCATGCCAACATCCGAAACGACAAATAGCACAGAACTTA
TTAAACTTTCACCCAAAATTTCGCCGGCAGTATGCAGTAGTAATAACCCA
TTCTTATCACAAACACATTGTAATAATAGTAAAGACATTGTTTTAGGCTC
GTTGAAGAGTCATCCAGAACTGATGAAAGTGAAAACAGAGGAGCCTTCTA
GCATAGAGGAACTACCTACTAAAGAAACAACTTCTCCAACACCAACAACC
TTTCTATCGAATTCTACAGACACCAAACCACAACAAAAACTTTTACTCTT
CATGAACACCCCTGAAAATCGGGCCAAATTAGCGGGAACAAATTTTAATA
TCATAAACGCGAACTTATTAAGTAAAATATCTGGAAATCAAAATCAAGAC
TCTTCTGGCAATAATATTAATTTGAGTACTAGTAATACGAGCAAACAAAC
AATGAATCTAATTAATTTGAAGAAATGTATTAGGTTAAATAACACAGTAC
GTAGCAAAGAGGACTCTTTAATTAAACAGACGTCAGATGATACGGTGACG
GCTTCCACTGTTAATGCAACGCTGCAATCCATAATGGCTGCCAATCATCA
AAGAGAGAAGAAAATTTTACCAGTAGATATTTTGAACGGACACACGTATG
GCTTGACGCGCAAGGATAGTCATGATATTGACTCAGGTTACGAGTCACCG
ACATCCTCATCTGGATCTTCACCCTGTTCTCCACCAATCGAGTTATCGGA
TCATCATCGCAAAGATGTCTGCTTATCCAATGAAAATATTCAATACATCG
ATATTGTTACGAGTCACCGACATCCTCATCTGGATCTTCACCCTGTTCTC
CACCAATCGAGTTATCGGATCATCATCGCAAAGATGTCTGCTTATCCAAT
GAAAATATTCAATACATCGATATTCCTCCACATGAACGCCAACCTTTCTA
TCTATCTGAAGAAGAGAAGCGTACACTCATCATGGAAGGTCTTCCCGTAC
CGCAAGGTTTACCGCTTAACAAATCTGAAGAACGCGCCTTGAAAAAGGTT
CGAAGGAAAATCAAGAACAAGATCTCCGCTCAAGAAAGCAGAAGGAAAAA
GAAAGAATATATGGAATCGTTAGAGAAAAACCTCCACATGAACGCCAACC
TTTCTATCTATCTGAAGAAGAGAAGCGTACACTCATCATGGAAGGTCTTC
CCGTACCGCAAGGTTTACCGCTTAACAAATCTGAAGAACGCGCCTTGAAA
AAGGTTCGAAGGAAAATCAAGAACAAGATCTCCGCTCAAGAAAGCAGAAG
GAAAAAGAAAGAATATATGGAATCGTTAGAGAAAAAAGTTGACTGTTATG
CATCTGAAAACTCAATACTCAAGAAGAAAGTGGGAAGTTTAGAAGTTGCA
AATCGTTCATTGATCATGCAAGTACAGAAGCTTCAAGCCCTTGTCACAGC
AAAGATTAGTTGACTGTTATGCATCTGAAAACTCAATACTCAAGAAGAAA
GTGGGAAGTTTAGAAGTTGCAAATCGTTCATTGATCATGCAAGTACAGAA
GCTTCAAGCCCTTGTCACAGCAAAGATT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000230_pilon | genome | sc0000230_pilon:321568..328437 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1345-1464:121 |
| Aaloc | 1138-1341:1193 |
| Aaloc | 1021-1137:1569 |
| Aaloc | 139-1017:3868 |
| Aaloc | 1-138:6871 |
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