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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000230_pilon:337088..343246- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034876 ID=XLOC_034876|Name=XLOC_034876|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6159bp|location=Sequence derived from alignment at sc0000230_pilon:337088..343246- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACACGATTTCAAGTAAGTATTGGATTCAGAACCGCACGATTGGAA
AGCCGTTTTCCGTGCGATTTCTTCTGTACGTGTAGGCTTTTTCATCGCCA
TAGGCCTTCTTAACCCTATTCGGCCTAGGGGGGGGGGGGGGCTGTTTCTG
TTCGGAGGTCAAATTATTGGTAATGATTCCTGAAATAATAGAGCTTTTGC
CATGAAATATTCTGTAAATTCTTAACTTTTATTTAGCTTCAAAATAAAAT
AAAATTTGACACCTAAAAATTTTCACACCTTGAGCATGATGACATTTCTG
ACAGTAAGGTGTCACAAAAATTGACACTTTTCCAATACAAATTTATTTTT
TATGTCAAATATATCGTTTAAACCGTAATTTATTGAATATTTAAGATAAA
ATAAGCAATTTGAAATTTAAAAATTTTTGGTTTTTGCTCACTTTGCGCAT
GATGAGTGACGTCATCAGAAAAATTTTTCGTCAAAAGTTACCTTATGTGA
CAAGGATCTTGTTTGCCAAATTTCATCCAAAAAGACCCACTAGATCAAAA
GTTAATGGGTGGTACAGGAAAAGCCCCCCCCCCTTAGTTCTGAACCGCCC
CTAAATACCTAGGTTGAATAGGGTTAAAGAGATTTCGTGTCACCTATAAC
CATTAGCTTGTAGCAAACATTATCTAAAGGATTGAACAGAAAGACAGTTT
AAGATCAATCACTGGTGCCCTAATCACTGTATCGGTTTTTACCGTGTGTT
CCGGTAATGTTTTGTTAAGATTCGAATATTTGCATAACTTAACAAAACCT
TTATTAGAGGCGTGTGAAGTGTACCCGGAACTTTCTTTATTACAGAGCGT
CATTTTATTAAAAGACTTATAATAGAACTCATCGTCCCTGCTTACTTTAT
ATTTACACACGATGAAATTATATCACTTTCACTTTCTTCTTCTAAATTTA
GGACAGCACAACCGATCGAATTCTACAAACACTTCTTGGTATTCTTTAAA
ATCTTTATTTTACGCACTATGGTTTAAGTTCCCTCTTTCGTTTCTGAGAC
ACCCAGTGCTACCTTAAAGGGAACTAATTTTGGCGAATTCGGCGAAAAAC
TCGGTTCTTTCCAAATTGAAATATTGCTGGCTCAAAATTTACCACTAATT
TTCTCTAAAACACAAATTTTCAGGCAAAAAGAAACTGATTCACCCTGTCT
TTCGCCAAAATTAGTTCTCACCGAGTTAGATAATTGCTTTAAAATAAGTT
CTCGCCAAATTTAATGCCAAATTAGTTCTCTGAAGGTAATATTTTTTATC
AATAAACTATTGTTTTTGTGCCAACAATTGTAAATTTCTGCTCGAACATG
TTGCTATAAATGCTTTTATGTTCATGTATTACTTGTTCATTCTCGTGATT
TACAGAAAGAAAACGTCAGACCTGATGGAAGAGAATTACTTAAGTTTCGA
GATGCGCTGTTAAACATCGGTAAGTTAAAAAGACCTCGTAATACAAATTA
TAATTGCGTTATGCGTAGGAAATGGGCCCCAAAAACCTTCTCTATCTCCA
AAAACCTTCTGAAACCCCATCGTAGAATCGTAGCTCGCTCAAATTGTTCG
CACTCCACGTGCATACATACTTACTTTGACTCTTTCATTCTTTCATTTTC
ATTCTATAGGATCAATCAACACAGCACGTGGGTCGGCTTTGGTTCGTCTT
GGTCACACAATGGTCATTTGCGGTATAAGTGCAGTAAGTTAATATGTTGT
TGTAACACATTTTGTTTCGACCCCTTGCATATTAATGGTACTCTTATATA
AATGTATAATTCAATGTCATAAGTAGCTCTTTTTTTTGAAATCAGATATC
TGAACAATTTTTGAAAAGTAAAACGCTAAAATTATTCAATTTGACATTTT
GTTTACACTTCTATCAGATTTTACTTGAAATTATGTTAAAATACATGGAC
TTGTTATAATCGTGATTTTAAATTATTATGTCAATGAATTTCAGGAATTA
GCAGAACCAAAAGCGACCACACCAGACAAAGGATTTTTTGGTAAGGTTTG
ATTTTTGTATTTCATAGAAAAAGATAATTCAAATATATCACAATTGGTTT
TTTTTTATAAATTCGGCTTTTATTGTACATAAAAAGCTCAATATTAAATA
CATATTAAATAGGTCGTGTCCGGCATTATAAACTTAGGATGTCTGCAAAT
AGGAAATTTTCAAGGAATATTCGTTTTCACCATAGTTCCAAATGTAGACC
TTCCACCTTCTTGTTCGAATAAATACAGACCTGGCCCTCCATCTGATGAT
GCGCAGATTCTTTCACAATTCGTCCTTGATGTTGCTACTAAGTATTCATA
TCCCTTTTTTTTAATCTTTTCTACGTTTTTCAATTGTGCGTTGTGGGGTA
TCTAGCTTGACTGGTTGGCAAGGAGGATACCCTAAAACATTTAAAAAAGA
GGTTTAATTTATAGTTGGGGTCTCTAGTGGTTTTCGACCTTATTTTAAAT
GATTTTGACCCCCGGTGGTATTCAGATTTGCGAGCTGATGGACTATGCCG
GAATAAAACTCTAACCCCCGGTTTTTAAGCTGGTTGTCTTTTTTCAAATA
ATATATTTTGAACTTTGAATGTAAGCTTCTAGTGACTTTTGGAAGCTTCA
ACTTTGTTTTAATCTATCGATTTTATTTTTTAGCTCAGAAGTATTAAAGC
TAGAGAATCTATGTATTGCTACAAAAAAGGTTAGTAGATCATTTTAATGT
GTTTATTTACTGCCTTGCATTTAAAAACCCAAAAGAATAAATTTCAGCCT
TTTGTTCTTTTGATGAAAAAATATACAGATATTCTCAGTTAATACAGCTC
GCCGACCAGAATCTCTATTCACTTCAAATATGTATTAAAACATTTGTTTT
TCGTTCTAATTTCAGTTAGCGTGGGTGATATATGCAGATATTCAATGTAT
AAGTCACGATGGAAATCTAAAAGATGCAATCATTGCTGCGCTATACGCTG
CCTTGCGAAACAGTGAGTGAAGTCGAGTCTTTATTTAATTCGAAGAAAAT
TCCTGGTCCCTTGAAAATCGAATTAAAGAGAGAGTGATTGTATTTCGTTT
CAAAAAATATTGAATGTCGATTTTTACTTTTTTTTTTCTAAAGTCACCCC
TGATTCTTTATCTGTGCTGCTCATTGGTGTTACTTGCTTAAAAACTTTCT
TTACTTTTTCAGCCAAACTTCCGACCGTTGAATACAACGAAGAAACAGCA
GACGTTCAAGTCAAACAAGACCAACTTTTTCAACTTCCCATTCAAACGTG
CCCTGTTTCTTCAACTTTTGCTCTCTTTCAAGAGTTAGTGTTTCAAACTT
TTAGTTCGTTCTACAAACCATGCAAATGAACGAGATGAACAAAAAATCTC
TACCTAACGATACAATTATTGAATGCTTGACTTGAGTGATGATATTGATT
TGTCTGCACAGTAACCAGCCGAACTTATTGATGCTTTTTGCTCTATTATT
TCAATCGAAGAAGTTTCTGTTAGGTTTCCAGGTTTTCCCTAAAAGTTTAC
TTCTGCTGGTGATATTTACTACAGTTACTTTTTGGACCTACCTCCGGGTG
CCCCGGTGGAGGTCCTATGAATTAACCTCTGTCTGTTCGTCCGTTCGTTC
GTTCGTTCGTTCGTTCGTCTGTTACCAGCTTTTCTCGAGATTGGCTCATT
AGTTTTTTCTGATTTTTTGCACAAAGATGCAAAATGGCAATGGCCAAAAT
GTGACGGAGCCCGATTTTCGAAAAAAAATCATTTCCGGCCGAAAATGCCG
GAAATATGCCGGAAAAACCGGTTTTTTGGCATTTTCTCAAGATTTCATCA
TTAGTTTTTTCTGATTTTTTGCACAAAGATGCGTATTAGCAATGCCCAAA
ACTTGGCCGAGTCCGATTTTTGAGAAAAAATTTTTCCGGCCGGAAATGCC
GGAAATATGCCGGAAATCGCCGTTTTTCTGGATTTTCATTGGACTTTTTC
CATATAATTGGTTGTTTTTTTCATTCAAAAACATTATTAATAGCAATGCC
CACCATCAAGCATGTTTCAATTTTCAATAAAATAGATTTTTGAAGCCGGA
ACTTTCTAAAAAATTGCCGGAACAGCCGATTTTCGCCGGAAAAAACGGTA
TTTCTTGAATTTCTTGAGCTGTACTTTATATTCTTTCATGAAATTTTGCA
CAATGATGCAAAATGTCAATACCTAAATTGTGACGGAGCCCGATTTTCGA
AAAACATCTTTTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACTGT
TTTTTTGGCATTTTCTCGAGATTTTATCATTAGTTTTTTCTGATTTTTTG
CTCAAAGATGCGTATTAACAATGCTCAAAACATGGCCGAGTCCGATTTTT
AAGAAAAAATTTTTTCCGGCGGAAAATGCCTGAAATATGCCGGAAATCGC
CGTTTTTCTAGATTTTCATTGGACTTTTCCATATAATTGGTTGTTTTTTC
ATTCAAAAACATTATCAATAGCAATGCCCACCAACAAGCATGTTGCAATT
TTCAATAAAATTGAGTTTTGAAGCCGGAATTATTTTAAAAGTAGCCGGAA
CAACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTCGAGCTGTA
CTTTATATATTTCTATGAAATTTTGCACACTGATGCAATATGACATTACC
TAAAATGTGAAGGAGCACGATTTTCGAAAAACATTTTTTTCCGGCCGAAA
ATGCCGGAAATATGCCGGAAAAACCGGTTTTTTGACTTTTTCTCGAACTT
TCATTTTTAGTTTTTTCTGATTTTTTGCAGAAAGATGCCTATTCGCAATG
CTCAAAAAATGGCCGAGTTTGATTTTTGAGAAACAAATTTTTCCGGTTGC
CGGAAATCGCCGTTTTTGCAGATTTTCATTGGATTTTTCCTTGTATTTCT
ATGTTTTTCACACAAAAACATTATTGATAACAATGCTCACCATCAAGCAT
GATTCAATTGTCAATAAAACTGATTTTGCGACCAGAACTTCCTATTTATT
TTTTCCCTACAACCCTTCTCTCTCCCCCCATCAACAATCAATGATGAATT
TATTGTGTTGTGTATTTTCGTTAAATGCTATATTTTCTGACTGATTTTTT
TCATTTTTCTTTTTGCATTGCTATCAATGCTAACTAACTTTCATCATCAG
GTAGGTCCATTCAGCATGTTGCTTGTTTTGTAGATTTTTTTTCGATATTC
TTATTTATCTACGGATGTGATGTCCCGTCAAGTTTCCTTTTTGCACTTTC
AGTGAAATCTTACTCGCTGACCCGACCAACGAAGAAGAAGAAATTAGCAA
TGGAACGATAACTATCGTTGTCAACAGTGAAGGGAAACTTTGCATGGTCA
GCAAACCAGGTATCTTAGATATGTTATATCCGAAATTCTTTGCATTTTAT
CTGACGTGATATATCAAATCGAGAAATCGAAGATGGTCTGACATTGCCAC
TTCTTCGATACAGCTATGCCTTTGGGAAATAATTATATAGGATCCCTATC
TAAAACTGCAAGGTGTATGTATAGTCTTTGCAATGTCGACAGTGTCATTT
TCTCTAGTCCAGTCTTTTCAGTAATATTCCTTCATAATGAGTTTGAACGG
TTTCTTTCCTAACTATCGACGATATGCAATCCGTTATATTTCTAATCATA
TCTAACATGATATAAACTTTCTAAACTTTCTAAAGTTTCTTTCTGTAAAG
TCAGACATTGGACAGAGTGACACCTGTTCGAAGGTGAAATCATTCTCAAC
CTCAATATACCTTATTACACGAATATTACTAGGCAAGTATTCAACGGCCT
TGAAATTTCGACGATCTGAAATTAACACGAATTTTTCTGCTTTTTCAAGG
AAACATCGGCTGGTTTTAATTAAGGGAGTTTTTATTAACACGAAATTATT
CAATTCGTGTTTATAAAATGAATAGTAATATTTGTGTAATAAGGTAATGC
AATACTAAATTGAATACCTCTAAACACCTCTAATATTCAGGTGGAGCGGA
GATGAAGGAGGAGAAACTAAAAGTATGTATTCGAACGGCCTTGAAAAGAC
ACGCGGAGGTGTTGAGCTTGGTCACTACAGCTCTTGGTGAAGATGAACCT
GTAAGGTAA Coding sequence (CDS) from alignment at sc0000230_pilon:337088..343246- >XLOC_034876 ID=XLOC_034876|Name=XLOC_034876|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1668bp|location=Sequence derived from alignment at sc0000230_pilon:337088..343246- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACACGATTTCAAATGTTACACGATTTCAAGACAGCACAACCGATC
GAATTCTACAAACACTTCTTGGACAGCACAACCGATCGAATTCTACAAAC
ACTTCTTGAAAGAAAACGTCAGACCTGATGGAAGAGAATTACTTAAGTTT
CGAGATGCGCTGTTAAACATCGAAAGAAAACGTCAGACCTGATGGAAGAG
AATTACTTAAGTTTCGAGATGCGCTGTTAAACATCGGATCAATCAACACA
GCACGTGGGTCGGCTTTGGTTCGTCTTGGTCACACAATGGTCATTTGCGG
TATAAGTGCAGATCAATCAACACAGCACGTGGGTCGGCTTTGGTTCGTCT
TGGTCACACAATGGTCATTTGCGGTATAAGTGCAGAATTAGCAGAACCAA
AAGCGACCACACCAGACAAAGGATTTTTTGGAATTAGCAGAACCAAAAGC
GACCACACCAGACAAAGGATTTTTTGTTCCAAATGTAGACCTTCCACCTT
CTTGTTCGAATAAATACAGACCTGGCCCTCCATCTGATGATGCGCAGATT
CTTTCACAATTCGTCCTTGATGTTGCTACTAATTCCAAATGTAGACCTTC
CACCTTCTTGTTCGAATAAATACAGACCTGGCCCTCCATCTGATGATGCG
CAGATTCTTTCACAATTCGTCCTTGATGTTGCTACTAACTCAGAAGTATT
AAAGCTAGAGAATCTATGTATTGCTACAAAAAAGCTCAGAAGTATTAAAG
CTAGAGAATCTATGTATTGCTACAAAAAAGTTAGCGTGGGTGATATATGC
AGATATTCAATGTATAAGTCACGATGGAAATCTAAAAGATGCAATCATTG
CTGCGCTATACGCTGCCTTGCGAAACATTAGCGTGGGTGATATATGCAGA
TATTCAATGTATAAGTCACGATGGAAATCTAAAAGATGCAATCATTGCTG
CGCTATACGCTGCCTTGCGAAACACCAAACTTCCGACCGTTGAATACAAC
GAAGAAACAGCAGACGTTCAAGTCAAACAAGACCAACTTTTTCAACTTCC
CATTCAAACGTGCCCTGTTTCTTCAACTTTTGCTCTCTTTCAAGACCAAA
CTTCCGACCGTTGAATACAACGAAGAAACAGCAGACGTTCAAGTCAAACA
AGACCAACTTTTTCAACTTCCCATTCAAACGTGCCCTGTTTCTTCAACTT
TTGCTCTCTTTCAAGATGAAATCTTACTCGCTGACCCGACCAACGAAGAA
GAAGAAATTAGCAATGGAACGATAACTATCGTTGTCAACAGTGAAGGGAA
ACTTTGCATGGTCAGCAAACCAGTGAAATCTTACTCGCTGACCCGACCAA
CGAAGAAGAAGAAATTAGCAATGGAACGATAACTATCGTTGTCAACAGTG
AAGGGAAACTTTGCATGGTCAGCAAACCAGGTGGAGCGGAGATGAAGGAG
GAGAAACTAAAAGTATGTATTCGAACGGCCTTGAAAAGACACGCGGAGGT
GTTGAGCTTGGTCACTACAGCTCTTGGTGAAGATGAACCTGTAAGGTAAG
TGGAGCGGAGATGAAGGAGGAGAAACTAAAAGTATGTATTCGAACGGCCT
TGAAAAGACACGCGGAGGTGTTGAGCTTGGTCACTACAGCTCTTGGTGAA
GATGAACCTGTAAGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000230_pilon | genome | sc0000230_pilon:337088..343246 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-834:118 |
| Aaloc | 610-714:857 |
| Aaloc | 490-606:2946 |
| Aaloc | 391-486:3245 |
| Aaloc | 346-390:3476 |
| Aaloc | 241-342:3923 |
| Aaloc | 193-237:4166 |
| Aaloc | 121-192:4499 |
| Aaloc | 55-117:4755 |
| Aaloc | 19-54:5208 |
| Aaloc | 1-15:6160 |
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