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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:756464..762601- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034852 ID=XLOC_034852|Name=XLOC_034852|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6138bp|location=Sequence derived from alignment at sc0000102_pilon:756464..762601- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAGTATGGATATTTCTTACTCATCTTTACAACGATATGTTTGTG
TCATGGCAAACCTGCCAATGAAGAAAACGACGCACAAATTGAAGTCAACA
TCGACTCTCGTGGAATGGTAAGAACTTTTTACTGACATTTGACTTTTTTT
AAATACGGTTAGGTTTTGGTATGCACGTTTTTTTATATAAGAAACACGTT
TATATAAGGAACTGGAAACTGAAATCCTTATAAAAAACGTGTATATATCG
AACACAGAGGCCACGGTAAGGGTCTAGTCTAGCATGCCATAAGCGACCGT
AGTGCAGTGGTAGAGCATCCGGCTACGGTTCGCAAGGTTGTGGGTTCAAC
CCCCAGCCGGGTCATACCAAAGATTCTCAAAATGGTACTTGATGCCTCTC
TGCTTGATGCTCAGCAACTAAGAGGAAGGATCAAGGGTAAGTGGAGAAAT
CCTGGGAGAAAGAGTGGCGCCCTCCCCTACCTTCGGGTAGATAGCTATCG
AAAGAGGAGCCTTCGGGTCGCCTCCGACTGCGGTCGCAGACTTACTTACT
AGCATGCCAGATGACTGATTTAAACAGTTGAAAATAAGCAAAAAATAGGA
AGAGGCAAATTGTAGTCATAATAACTATTATTGTCCCGAAACAATTATCG
TGTTAGCGATTCGCGAAACTTTAGTACCCGCGAAAATACGCTGAGGGGAT
CATATAACACCCTTGCTGTATCACACGGATTATTAGCGACTCCAGCCTAG
TAAGGGTCAGTTTTGCTACTCACTTGAAAGAATCAAAACTTTCGCAATAA
GTCTTTTTCAAATTAGGATTTTATTTCGAGCATGACACCCATCTGCTTAT
CTTCATCACGTATAAATTTTTATTCTAGATGTCTTTACAAAAGTTTGGTT
GGTTCAAACCAAAATTCTCTTCGGAAGCTGGTCAAATACAAGCTAATAGT
GAAGCCCTTGCACAATCATTGAGAGACTTTCAAAAGTAAGTACATGGTTT
TCTTGAGAATGGCAAGCGTCTGTCTTTCTTGAGACACACCACGTGGGAAT
AGTGGCTAAGAGTACTTATAAGAGGAATAAATTGCCCTTAAAGAGTGGTT
TGGAAAGTTGAATTCCGCGAACGTAGTGCAAGCGTAAGCTTTTTTCAAAA
TTGTTTCATGGGTTAAATGCGTTGTATCCTTATACACAAGGAGTGTGTAA
ATAGAGTTTGTTTTGGTTCGATTAAAGTTAACTTCTAGCTCAGGAATGGT
GTATTGACCGATTAAAAACTTCCAAATTGTAATACTCTGTATGTTTCAAT
TTTTTAGCAAAACAATCGAAGTGTTTAGCAAAATAGTCAAATTGTTATAT
TTTTTGTAGGTTCGCACACATTCCGGTGACGGGAGAGTATGACGCCGACA
CGCAACGTATGATGCAAAGCCCCCGTTGTGGGATGTCTGACAAAACCGGT
GACACAAGACTGAAAAGAAAGAAAAGATATAATCGGCACGGCACTAAATG
GCACAAAAAGGTGGGTTACTTGTAAACAATCCATCTGATAAGGAAAAGGA
CTTGGATGGAGTTCACTAGAATGACATCCGAAGTCATTGCAATGAAGGGC
TTCAAGATAAATGTTTTGAAATCGTTCGACCCATAGTATGACTGTTGCAT
AGAACAGCTATAATTAAGTCTTTTCAATCTACAATGATTTAGACAAATTT
TACATAAGGAGTCGTTGTGACTCAATTGTTTATTCATTTGTTTGTATATT
TTGATTATTTGTCAGGAAATAACATGGGCGGTTGAGAATGACAATGATGA
TGGCATCACACGTGAGATGGTTCAATACACCATGAAACGTTCTTTCGATA
AATGGCAAGCTGTCACCAACCTGGAGTTTAAGGTTCGTCAATTTCACATT
TTAATTTATAGGTCATTCGTACGCGTTTACTATTCCCTGAAACCTCGGCA
AAGTTTCATAATGATACTATAAGTATTTCTGAAAGTATCTTACCCCACTT
GAAAAGAATTCTCACTGACCCCCTCCTTATTCAAAGATACCGGGTGTTAA
TCTCCGATTCAGCCTGAAACCATGAAACAGCCTAAACTAGAGATGTTTAG
GGTAATAAATAACCACAAGTCGTTTGACCATAAGGACTAGTAGGAACCTG
CCAACTTAAGTTGCTATACGTATAATATACCTAGCCTAGCCTAGATGTCC
TATGCAGTGTCATTGAGCACAAAATGCATGTATCTGCTCTGCCACTTTCT
CTCCTGAGAGAAGAAAATTGGACAAAATTCACCTCTTATAATGTTGAAAT
TTCAAGATAAATAGGGAATAATTATATTATAAAGATTAAAGTTCACAAAG
TAAAACCTCAAAGTGAAACTAGAAGAACGAAACGATCTTGCTAAAACTCT
TTTTAATTCTTATTCTTAGGAATTGGTAGGTCGTCCAGTCAATTCAGCTG
ATATTCGCGTGCGTTTTGAGCGTGGCACGCATGATGACTCATACCCATTC
GATGGTCCGGGCGGCACGTTAGCACACGCTTTCTATCCTCATGATAATAC
GGGACTGGCTGGCGATGTCCATTTCGATGATGCGGAAAAGTGAGTACAAT
CTCGGTCAAAATATATTGGGAATTTTGGTTAATTCCTCGTTTTCAGCAAT
TTAATGTTCGGGCGAAAAAGTCGCTTTTGGGCAAATTGATAAATTTTTAT
TCGAATGTACTTCCAGGCTATATTCGGAGCCCAATTGGACCATTCTTGGA
CTTTTAGTTCCTCAGATCCTAAGGTCCTAAGTCTTAAATCTTAAGTCTTA
AGTCTAGTGTTAAAACTCTACCCGTCCAACCTAATTTAGAGTGCTTCCAA
ATCGTTTGTGGTTGTAAGATTTCGTGGGAATTTCCCTTTTTTCTCAAATA
TTATGACTTTGATTGTAGGAAAGGTGTTAGTTTTCTTAATGAATTTTAAA
TCCTAAAGTGCTGTATATACAGTTTTACCGTATTTAATTTTGATTTACAA
CATATGGCGTCTCACGATTAAGTCTCTAAGGGTTACAAAAACAACAAAAG
TCAAATTAGTTTTTCTGAAGGTCAGTATTTCTTGAAAAATTCTCTTTTTA
AGGCTACTTTTCCGCTGATTTTCTCTCTCAAATTGTAAGTCTTCGACGAT
TCGGTCTGCACATACTTTACATTATCCAACCCTGGTACCCCCCGGATTGT
AGCTTTATAAATGACTGGACACGTCAATTTAAACCATCACTAAAAGTGAT
AATTTTCTTTCATAGGTATACGATCAAAGATGATTCGGGTCGGTCGTATA
AGAAGTTATTATGGGTTGCTGTTCACGAGCTGGGACACAGTATCGGTTTA
GAGCATTCCGATTTGAAAGGAGCCATCATGTATCCATGGTATCAACATTT
TGAGGGAAATGATTTTGATCTCACTGATGACGACCGGTTGGGTGTACAGA
TGATTTATGGTAAGTTATCGGTCAGATTGTTCCCCGGGGGGCACTGGGTT
TGCGGACTGACGGTATGTGCGGGCCAAAAATTGGCTAGAGTGCATTTTCC
CCCAAATTTTCGATCCCTTTCGTGCAAAAAATGGTCAAAATTCTAGCATT
TCTGGTCAAGATATCTAGATTTTTCAAGAATTTTCTGAAATTTCTACCCT
TACAGTGCATCTCTAGTTTTTCCGACCCTTACAGTGCATTTTAAACATAT
TGGAAAAGGTACCCTTAGGACCCGCACATACCCGTCGGTCCTTTTGCCCA
GCTGCCCCCCCCCCCGGGGATTGTTCTTTCTACCTGAAGGTCGACTAAAG
TACGTATTCATGGTATATAATCTGCTAGGTCAAGCATTATTGGAATCAAG
GGTTCGACGAAATTTACAGATTTATTTAATCCACCAAATTGAATGCCCTA
TGAAATACTTTTTCGGCCATCCGCCAAATTAAATTCCCGCCAAAACTTCC
CGTAACAGAAACCATCTGTTAAATAAGAGTCGATTGGCTAAAATAACTGA
AATACAAACTACAATCTAAAGTAACAGCTCCAACTCTATCACCAATTCGA
CAATATCAAATAGTTTTAGATTTACTTTACAATTACTTACTTGGATCTTT
TATTTAGGTGGAAAAGATCCAGCGGTGACAAATCTGCCTGTGACCGCCAT
CACGCCTTCAACACCCTCTTTACAAACAGTCAGGAAATCATCTTGTACAA
ATAAAATTGGTGCCGCACTTCTAGGTATAGACGGCAGGACTTATATTTTC
AACGGGCAATATTTCTACATTTTGTACCAATCTGGAAGAGGTTTGATGGG
CGTTGAAGAAGGCCCTTTGTTGATCAGCGCCAAGTTTGATGGTTTGATTA
CGTTTGACGCTATCTTCCGACGCCCAAATGACGGCATGATTATCGCTTTC
CACGGAGATTCGTAAGTTAAAAATGTCTAAAAATGTTCTTAAAATCTTCT
CAACTTGTTTTAATATTTTGGTCACCTACCAAAGCCTTATGTTTTTATAT
AGTTTGTTATTATAAAATGAAAATGTGCGATTGATGAATTGTATTAAAAA
GATCCGGAGCACTCGCTTTACGATTAGTGATTTATTTCAAAAAACTTTCT
CCTTCATTCACTTACATTTTTTATAAGAACATCCGAAATCTTTGTAGTTT
GATTCGCTAGAGGATGAGCAGAAGCCTAAAATCTTTGAAGCCTTTTATTT
TCTTAACTTTTTAAGGCTTCAGCCTAAAAAGTACTGTTAAAATTTTCTTA
ACTTAGCTTAGTTTTTTATATTTGGGCCATCGAAGCCTTCTGTTCTTACT
TTTTTTCATTCATTCCCTTAGGTACACAATCTATAAAGGTTATAAGAAAC
TAAGACCTGAGGAGGGTGGTGGAACGAGAAAGATTTCAGATGGTTTTCAG
AAATTGGAAGAAGGATTTCGAGATGTCGATGCAGCTATTTACAATAAAGA
AAACAACAAACTATACTTATTTAAAGGTACAGAACTGTTTTTTATTCAAA
ATATAAGGTTTATATGGTTTTTCAGAATTCTTTTGGAAATTCAACTCTGG
ACCAAATTTCAGGCCTCTGTAACTTCCTTTCCGACTTGGGACACTCTGAG
ATTCACATACTCTAGCACAAAGCTCCTGGATTTCTGTATATACACTTTGA
ATGTTGCACTCCTAATCACGGGATAACTATTTTGAAACAAGAAAACTGCT
AAAACTGCTCACACAGCAAACAAACGAAAAAATAAAACACATTCAGGTTA
AGTATATTTTTACTAGCATACATTGCATAGTGGCTTAATATTCCAATTAT
TTGAAATCTTTCATCTCAAAAAAAAGATCCATGATACTTTGCAAAGGTCG
CGCTCATTCATAACGTCTGGTTAGATTTTTCTCCTCGTCGTGACCTTACT
TCAAATCTGATTATCAAATTTCCTTTTTAGGTGAAAAGTATTGGAGATTC
AGTACAACTTTCAATTCTAACGATTTCGTGAGAGACAACAATTACCCACA
ATCCATTGCATCAAGATGGCATGGTCTACCAAAAAGTGTCGATGGTGCTT
TACTTTGGCAAGATGATAAAATCTTCTTTTTCAAAGGTACGGGAAGTTTT
GTAAGATTGATTTGAAAGCTATTTTTTGAATCATTCAAGGCATCGCAACC
GGGGGATTTACTTAGGCAAATGGAGGGTACAGGTATGAACCGCCCTTAAG
GGTACCTTTTTTAGACCTTCAAAGTCCCACTAAGGTTCGTAAAAATCACA
ATATCTATTTCAGTCCCGCTATGGGTTACAACAAAAAAACAAAAACTCTA
TTATTTATACCCAAGAAGGCTAAACTTTAGAAAAAAGTCCCGGTAATGGA
CTATTATGAGCACCACAAGAGCTTCTTTAACATTCGTCTAGCTGATTATT
CAATTTCCTTTCAATTTCCTTTTTTTTTGCAGACAATGAATATTACCGTT
GGAACCAACGATTACAGAGAGTACACAGTGGATATCCTCAAAAATTAACC
AGTACTTTTCTAGAATGTACTAAAGGAACTTTCCAATCAGAACGTGAAAT
GGCTGCAGATTCCAGCAGTATTGAAATTACACCCTCTTTCTTGGGACTGT
CGATAGCATTATTAGTGCATAGAATCGTAGTCCTGTAG Coding sequence (CDS) from alignment at sc0000102_pilon:756464..762601- >XLOC_034852 ID=XLOC_034852|Name=XLOC_034852|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3354bp|location=Sequence derived from alignment at sc0000102_pilon:756464..762601- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAGTATGGATATTTCTTACTCATCTTTACAACGATATGTTTGTG
TCATGGCAAACCTGCCAATGAAGAAAACGACGCACAAATTGAAGTCAACA
TCGACTCTCGTGGAATGATGAAGAAGTATGGATATTTCTTACTCATCTTT
ACAACGATATGTTTGTGTCATGGCAAACCTGCCAATGAAGAAAACGACGC
ACAAATTGAAGTCAACATCGACTCTCGTGGAATGATGTCTTTACAAAAGT
TTGGTTGGTTCAAACCAAAATTCTCTTCGGAAGCTGGTCAAATACAAGCT
AATAGTGAAGCCCTTGCACAATCATTGAGAGACTTTCAAAAATGTCTTTA
CAAAAGTTTGGTTGGTTCAAACCAAAATTCTCTTCGGAAGCTGGTCAAAT
ACAAGCTAATAGTGAAGCCCTTGCACAATCATTGAGAGACTTTCAAAAGT
TCGCACACATTCCGGTGACGGGAGAGTATGACGCCGACACGCAACGTATG
ATGCAAAGCCCCCGTTGTGGGATGTCTGACAAAACCGGTGACACAAGACT
GAAAAGAAAGAAAAGATATAATCGGCACGGCACTAAATGGCACAAAAAGG
TTCGCACACATTCCGGTGACGGGAGAGTATGACGCCGACACGCAACGTAT
GATGCAAAGCCCCCGTTGTGGGATGTCTGACAAAACCGGTGACACAAGAC
TGAAAAGAAAGAAAAGATATAATCGGCACGGCACTAAATGGCACAAAAAG
GAAATAACATGGGCGGTTGAGAATGACAATGATGATGGCATCACACGTGA
GATGGTTCAATACACCATGAAACGTTCTTTCGATAAATGGCAAGCTGTCA
CCAACCTGGAGTTTAAGGAAATAACATGGGCGGTTGAGAATGACAATGAT
GATGGCATCACACGTGAGATGGTTCAATACACCATGAAACGTTCTTTCGA
TAAATGGCAAGCTGTCACCAACCTGGAGTTTAAGGAATTGGTAGGTCGTC
CAGTCAATTCAGCTGATATTCGCGTGCGTTTTGAGCGTGGCACGCATGAT
GACTCATACCCATTCGATGGTCCGGGCGGCACGTTAGCACACGCTTTCTA
TCCTCATGATAATACGGGACTGGCTGGCGATGTCCATTTCGATGATGCGG
AAAAGAATTGGTAGGTCGTCCAGTCAATTCAGCTGATATTCGCGTGCGTT
TTGAGCGTGGCACGCATGATGACTCATACCCATTCGATGGTCCGGGCGGC
ACGTTAGCACACGCTTTCTATCCTCATGATAATACGGGACTGGCTGGCGA
TGTCCATTTCGATGATGCGGAAAAGTATACGATCAAAGATGATTCGGGTC
GGTCGTATAAGAAGTTATTATGGGTTGCTGTTCACGAGCTGGGACACAGT
ATCGGTTTAGAGCATTCCGATTTGAAAGGAGCCATCATGTATCCATGGTA
TCAACATTTTGAGGGAAATGATTTTGATCTCACTGATGACGACCGGTTGG
GTGTACAGATGATTTATGGTATACGATCAAAGATGATTCGGGTCGGTCGT
ATAAGAAGTTATTATGGGTTGCTGTTCACGAGCTGGGACACAGTATCGGT
TTAGAGCATTCCGATTTGAAAGGAGCCATCATGTATCCATGGTATCAACA
TTTTGAGGGAAATGATTTTGATCTCACTGATGACGACCGGTTGGGTGTAC
AGATGATTTATGGTGGAAAAGATCCAGCGGTGACAAATCTGCCTGTGACC
GCCATCACGCCTTCAACACCCTCTTTACAAACAGTCAGGAAATCATCTTG
TACAAATAAAATTGGTGCCGCACTTCTAGGTATAGACGGCAGGACTTATA
TTTTCAACGGGCAATATTTCTACATTTTGTACCAATCTGGAAGAGGTTTG
ATGGGCGTTGAAGAAGGCCCTTTGTTGATCAGCGCCAAGTTTGATGGTTT
GATTACGTTTGACGCTATCTTCCGACGCCCAAATGACGGCATGATTATCG
CTTTCCACGGAGATTCGTGGAAAAGATCCAGCGGTGACAAATCTGCCTGT
GACCGCCATCACGCCTTCAACACCCTCTTTACAAACAGTCAGGAAATCAT
CTTGTACAAATAAAATTGGTGCCGCACTTCTAGGTATAGACGGCAGGACT
TATATTTTCAACGGGCAATATTTCTACATTTTGTACCAATCTGGAAGAGG
TTTGATGGGCGTTGAAGAAGGCCCTTTGTTGATCAGCGCCAAGTTTGATG
GTTTGATTACGTTTGACGCTATCTTCCGACGCCCAAATGACGGCATGATT
ATCGCTTTCCACGGAGATTCGTACACAATCTATAAAGGTTATAAGAAACT
AAGACCTGAGGAGGGTGGTGGAACGAGAAAGATTTCAGATGGTTTTCAGA
AATTGGAAGAAGGATTTCGAGATGTCGATGCAGCTATTTACAATAAAGAA
AACAACAAACTATACTTATTTAAAGGTACACAATCTATAAAGGTTATAAG
AAACTAAGACCTGAGGAGGGTGGTGGAACGAGAAAGATTTCAGATGGTTT
TCAGAAATTGGAAGAAGGATTTCGAGATGTCGATGCAGCTATTTACAATA
AAGAAAACAACAAACTATACTTATTTAAAGGTGAAAAGTATTGGAGATTC
AGTACAACTTTCAATTCTAACGATTTCGTGAGAGACAACAATTACCCACA
ATCCATTGCATCAAGATGGCATGGTCTACCAAAAAGTGTCGATGGTGCTT
TACTTTGGCAAGATGATAAAATCTTCTTTTTCAAAGGTGAAAAGTATTGG
AGATTCAGTACAACTTTCAATTCTAACGATTTCGTGAGAGACAACAATTA
CCCACAATCCATTGCATCAAGATGGCATGGTCTACCAAAAAGTGTCGATG
GTGCTTTACTTTGGCAAGATGATAAAATCTTCTTTTTCAAAGACAATGAA
TATTACCGTTGGAACCAACGATTACAGAGAGTACACAGTGGATATCCTCA
AAAATTAACCAGTACTTTTCTAGAATGTACTAAAGGAACTTTCCAATCAG
AACGTGAAATGGCTGCAGATTCCAGCAGTATTGAAATTACACCCTCTTTC
TTGGGACTGTCGATAGCATTATTAGTGCATAGAATCGTAGTCCTGTAGAC
AATGAATATTACCGTTGGAACCAACGATTACAGAGAGTACACAGTGGATA
TCCTCAAAAATTAACCAGTACTTTTCTAGAATGTACTAAAGGAACTTTCC
AATCAGAACGTGAAATGGCTGCAGATTCCAGCAGTATTGAAATTACACCC
TCTTTCTTGGGACTGTCGATAGCATTATTAGTGCATAGAATCGTAGTCCT
GTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:756464..762601 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1474-1677:205 |
| Aaloc | 1318-1470:707 |
| Aaloc | 1162-1314:1317 |
| Aaloc | 859-1158:2030 |
| Aaloc | 664-855:2873 |
| Aaloc | 493-660:3720 |
| Aaloc | 376-492:4374 |
| Aaloc | 226-375:4779 |
| Aaloc | 118-222:5261 |
| Aaloc | 1-117:6139 |
|
