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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:464942..466234+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034846 ID=XLOC_034846|Name=XLOC_034846|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1293bp|location=Sequence derived from alignment at sc0000098_pilon:464942..466234+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACAAATCGAGCCAACGTCaatattgtcacttttttcacaGGATTTC
TTCGCTTTTAAACGACCTCATTAACAATCATTTTGAAAGTGATGGGATGA
CTTGTCCTAAAGTATATACTGGAAACCCTGGTCAGCCAAAATACGAAATA
TCGAAAGAACAAATTGAATATCTCAgagatcttcatttttcttggaCCAA
GATAGCTGAGCTACTTGGTATTTCTCCTAAAACACTTTCAAGAAGAAGAA
ATGAACTTAGAATTCAAAATCACAGAGATTTTACTGATATAAATTATGAA
AACCTTCGTGCTGAAATGGAAAGTATCAGAGAGCTTACACCTAATATTGG
ACAAACTAGAATGTTGGGGGCTTTAAGGGCGCGCGGTATTAATGTCCAAA
GATGGAGAGTTCGAAATTTACTGAGAGACATTGACCCACAAGGAACAATA
ATGCGATGGAGGACTACAACTAAGAGGCGCAAGTATAACGTAAAATATCC
AAATTCGCTGTGGCACATTGATGGCAACCACAAGATGATAAAATGGCGGT
TTGTGGTACATGCTTGCATTGATGGTTTTTCCAGGTTGATACCATATTTG
TATTGTGCAAATAACAACAAATCAGACACTGTATTAAATCTTTTCCAGGA
TGCATCTCAAAATTATGGGCTGCCGTCTAGAGTTCGAGCTGACTATGGTC
TAGAAAACGTCGGTGTTGCAAGAATGATGGTGGAAACACGAGGCCCTAAT
AGAGGTAGTATGATCACTGGTAGCTCAGTTCATAACCAGAGAGTAGAACG
TTTACATCGGGATGTAACTACTGGAGTTCTTCGAGCCTATATAAATTTGT
TTCAAGATATGGAATCTGATGGAATTCTCGACCCACTAAatgaaattcat
attttttgtttacatttggtgtTTCACAATGAAATAAATAATAGATCATT
GAGTGAATTTGTCCTTCAATGGAATCAGCATAGTCTTAGCACAGAACATA
ACAGTTCACCCTTGCAGCTCTGGACCGCCGGACTATTACGTAATTCCAGG
GCTagacatcagattttgaatgaCATTCCTGTTGAAGGTTTAATGCTATT
TGGAACAGAAGGAGATGTTGATTCAgtcattgaagatgaagattATGAGG
TTAATGTTCCAAGAATTAATTTGCCTTTGACTCATGATCAAATTCATCAC
ATTATGGAAAATGTCCCGCAAAATATTCCAAGGAATGACAGGGTTCATGC
TTACATTAACATTGTTCAAATGGtggaaaatatgttaatttga Coding sequence (CDS) from alignment at sc0000098_pilon:464942..466234+ >XLOC_034846 ID=XLOC_034846|Name=XLOC_034846|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2586bp|location=Sequence derived from alignment at sc0000098_pilon:464942..466234+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACAAATCGAGCCAACGTCaatattgtcacttttttcacaGGATTTC
TTCGCTTTTAAACGACCTCATTAACAATCATTTTGAAAGTGATGGGATGA
CTTGTCCTAAAGTATATACTGGAAACCCTGGTCAGCCAAAATACGAAATA
TCGAAAGAACAAATTGAATATCTCAgagatcttcatttttcttggaCCAA
GATAGCTGAGCTACTTGGTATTTCTCCTAAAACACTTTCAAGAAGAAGAA
ATGAACTTAGAATTCAAAATCACAGAGATTTTACTGATATAAATTATGAA
AACCTTCGTGCTGAAATGGAAAGTATCAGAGAGCTTACACCTAATATTGG
ACAAACTAGAATGTTGGGGGCTTTAAGGGCGCGCGGTATTAATGTCCAAA
GATGGAGAGTTCGAAATTTACTGAGAGACATTGACCCACAAGGAACAATA
ATGCGATGGAGGACTACAACTAAGAGGCGCAAGTATAACGTAAAATATCC
AAATTCGCTGTGGCACATTGATGGCAACCACAAGATGATAAAATGGCGGT
TTGTGGTACATGCTTGCATTGATGGTTTTTCCAGGTTGATACCATATTTG
TATTGTGCAAATAACAACAAATCAGACACTGTATTAAATCTTTTCCAGGA
TGCATCTCAAAATTATGGGCTGCCGTCTAGAGTTCGAGCTGACTATGGTC
TAGAAAACGTCGGTGTTGCAAGAATGATGGTGGAAACACGAGGCCCTAAT
AGAGGTAGTATGATCACTGGTAGCTCAGTTCATAACCAGAGAGTAGAACG
TTTACATCGGGATGTAACTACTGGAGTTCTTCGAGCCTATATAAATTTGT
TTCAAGATATGGAATCTGATGGAATTCTCGACCCACTAAatgaaattcat
attttttgtttacatttggtgtTTCACAATGAAATAAATAATAGATCATT
GAGTGAATTTGTCCTTCAATGGAATCAGCATAGTCTTAGCACAGAACATA
ACAGTTCACCCTTGCAGCTCTGGACCGCCGGACTATTACGTAATTCCAGG
GCTagacatcagattttgaatgaCATTCCTGTTGAAGGTTTAATGCTATT
TGGAACAGAAGGAGATGTTGATTCAgtcattgaagatgaagattATGAGG
TTAATGTTCCAAGAATTAATTTGCCTTTGACTCATGATCAAATTCATCAC
ATTATGGAAAATGTCCCGCAAAATATTCCAAGGAATGACAGGGTTCATGC
TTACATTAACATTGTTCAAATGGtggaaaatatgttaatttgaATGGACA
AATCGAGCCAACGTCaatattgtcacttttttcacaGGATTTCTTCGCTT
TTAAACGACCTCATTAACAATCATTTTGAAAGTGATGGGATGACTTGTCC
TAAAGTATATACTGGAAACCCTGGTCAGCCAAAATACGAAATATCGAAAG
AACAAATTGAATATCTCAgagatcttcatttttcttggaCCAAGATAGCT
GAGCTACTTGGTATTTCTCCTAAAACACTTTCAAGAAGAAGAAATGAACT
TAGAATTCAAAATCACAGAGATTTTACTGATATAAATTATGAAAACCTTC
GTGCTGAAATGGAAAGTATCAGAGAGCTTACACCTAATATTGGACAAACT
AGAATGTTGGGGGCTTTAAGGGCGCGCGGTATTAATGTCCAAAGATGGAG
AGTTCGAAATTTACTGAGAGACATTGACCCACAAGGAACAATAATGCGAT
GGAGGACTACAACTAAGAGGCGCAAGTATAACGTAAAATATCCAAATTCG
CTGTGGCACATTGATGGCAACCACAAGATGATAAAATGGCGGTTTGTGGT
ACATGCTTGCATTGATGGTTTTTCCAGGTTGATACCATATTTGTATTGTG
CAAATAACAACAAATCAGACACTGTATTAAATCTTTTCCAGGATGCATCT
CAAAATTATGGGCTGCCGTCTAGAGTTCGAGCTGACTATGGTCTAGAAAA
CGTCGGTGTTGCAAGAATGATGGTGGAAACACGAGGCCCTAATAGAGGTA
GTATGATCACTGGTAGCTCAGTTCATAACCAGAGAGTAGAACGTTTACAT
CGGGATGTAACTACTGGAGTTCTTCGAGCCTATATAAATTTGTTTCAAGA
TATGGAATCTGATGGAATTCTCGACCCACTAAatgaaattcatatttttt
gtttacatttggtgtTTCACAATGAAATAAATAATAGATCATTGAGTGAA
TTTGTCCTTCAATGGAATCAGCATAGTCTTAGCACAGAACATAACAGTTC
ACCCTTGCAGCTCTGGACCGCCGGACTATTACGTAATTCCAGGGCTagac
atcagattttgaatgaCATTCCTGTTGAAGGTTTAATGCTATTTGGAACA
GAAGGAGATGTTGATTCAgtcattgaagatgaagattATGAGGTTAATGT
TCCAAGAATTAATTTGCCTTTGACTCATGATCAAATTCATCACATTATGG
AAAATGTCCCGCAAAATATTCCAAGGAATGACAGGGTTCATGCTTACATT
AACATTGTTCAAATGGtggaaaatatgttaatttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:464942..466234 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 937-1290:940 |
| Aaloc | 1-936:1 |
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