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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:935061..938402- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034796 ID=XLOC_034796|Name=XLOC_034796|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3342bp|location=Sequence derived from alignment at sc0000092_pilon:935061..938402- (Clytia hemisphaerica_ch_hm2_pilon)
AATTTTTACATAAAAAGCACGATGTCCCCTCGAGCGTTGAGACCAAAAAG
AAGTTTGATAAATAGTGATTTTGAAGGTTATAAACTAAACACAGATGGCT
TAAAAGCAACATCTAAGCCACTTTTATCAAAAGTGTACCAAGTAAAGAGA
GATCCAAATAAATTCACTTTCAACTATGTCAAGCGTCAGCTAATGCACAA
TCATTTGTTTTTCAATCAATGGAGCAATGATATCTTTTTTGTTGATGAAA
ACTTAAACATTGTTCTTATACAAGCTGAAAAGGTGAGTATAAAGAGAATT
TATTTTTTTTGTCTTTAACATTCTTCATATCCTGTTATGTTCTAAATCAC
AATTCAAAACCCAAAAACTAGATCTCAAAACCAACTTGTGGGTTTTATTT
TAGGCTGAATTTCAGTATTATACTGTTGCCAAACTTGAAAGCCATGGAGA
AGATCTGAACAGTTTCAGTCCAACAATTTCTTTTCCAACAGAAAATCTCT
GCATCACATCATCAGGATGCGGTATTCTTCATTTGATGAAGATTCACAAG
GATGGTCAATCAAAGCAATTCCGCCCATTAGCCACAGGACTAATTCATGA
TTTCAACACACCCATATCCATTCTCAATTCACATCACGACCCAACAACCA
ATATAATACATGTTTTGGTTCTTTCCTTAAAAGACTTTGAAGAGGATGAA
AAATCTGTTTCTTACGCGCTTTTGCATTGGCTTCAAATATCAAACAGTCC
AAATGATGACGTTGAAAGTACTGTCCGAAATTGGAAAACTTTCAAAGGCC
GTAATTTGCCACGTGAATGTTGGCTGAGTGAGGATTACACTGAGTTGTTT
GTGGCTTCAGAAACTGAATTTGAGTTGGTCAATGTAGTAACATATGGTAA
GAAAAAGTCATATTAGATATTCTGTTACCAACTATAAGTACATTAAAACA
TTTAAACTTCTTCTCTTTGTGGCATATAAATATATTTCTGCCTCAAGGAA
ATGAGTGCTGCTATGAGGGTCTGTAGAGTTTTATCTCTGAGTTTTAACAT
GATAATTAAAGACTAGAAGCCACTGAAACCCTCCAAAACAAAAATATCCA
ATGAAATAAGTGGGACTAATTTTTGCCTGAACTCTAGATTCTGAAAAAAA
TACACAAAATTCTCAATATGAAGAAAACCTTCATGCAAACAAAAAACCAA
TCTGAACCCATACTTGCTTTATTATATATAACCTTTTATCTCTTCCCACA
GAGAGATTGCACACTGTAAGTTCACAAGATGAAGCTGAAGATACCATCAA
ATACTATCATTGGCATCAATGTAAAGAAATGCTGACCATTGTTTTCGACC
TCACACTAACTCAAGATGAGGTGGAATGCCAATTTCTTCACAACTTTTTG
TCCATTAAACTGAAAACTGGTAAAACTCTGTTGGAAGGGACATTGGAAAA
AATGATTTTACAGGATGCTTCAAAATGGTATATTCAAGAAGGAAGGTAAT
TCATAACTCTCAAAATTCATCTTTGGCTGCTGGTATCAGTCAATTGATCT
TCACATAAATTGATCTAAATAAATGTCACACACTTTTCATGGTCAATTTC
TAATGGATTTGATATCAGAATAATTCTAATGAAAGGTTTTCCTCTAATTG
ATATAATTGAGAACAAAACCCAATGTAATTTCATCAATCTTTTTTTTACA
GATTAGAAATCGTGTTGGTCAAGAAAACACCGGGTGAGTTCTGGTCATCG
GTCATTCCTGATGAAAAGCACGGTGTCCATGATATTGAGGGAGAAGAGCT
TGAAAGAATGAATCAAATACATGAGCAGCTGGAACACTTAACTTCTGAAG
GCATTCAAAGGGTACTAAGATATTTAAACTTCTAAGTTTATTTCTTTTTA
TTATAAGACTCTTTCTACTCTTGAACCTGCTAATATCCAACAGGAACTTG
AATGTAAAAATTCAATATTCCTGTATTTTCAATGCAATACGCTATTTCTT
TTTTTCTTAATACGAATTTACTTGTAATGTGATTTTGTGGTGTAATAATT
CTATCTAAACCTTCACCAAACTGGTTGCTTTACATGTTCATACAATGCCT
TGATAAATTCACTACCATCAAACCGGAAGGTTATTAGGGTGCATACCATT
TAGCCAAAAACCCCAAAAAGTGAAACAGAGGGTTTAGCGAACGCATTGAT
TCATTTAAAAGTTTACCTAAACAGACGATCAAAGCCAACAGTCTTTTTTC
TGTGTTTTCTTCGTTCGCTAAACCAAGGGTTTAGCAAACAAACTGCACCA
TTTGATTTTTTGTTTTACTAAACCATTATTCTAACCAAGCACTACATTTT
GTTTACGCTAGTTCACTAAGCGCACGCATGCATAAGCCCTAAGCTTTAAT
GTTTTCTTCTGCTGGGTTACCATTTTGAAATTCGTTGCTGTGACTTTAGG
CAAGATCCTGGAAATCGAATTAGCAATGTAACAGCTTCTGTGTTTAGGTA
AACAAACCCAAACCATTTGCAGTTTAGTGAAACAGTTTCAGTTTTTTGGT
TTTGAACATTAAAAGGTATGCAACCTTAATTTTTTTTTCTGTAGGAAGAA
AAACATGCAAAAGATTTCAACATTCAACAATTAGAGGAATGCGATGAGAA
TTTAGAAGAAGAAATCAAAGTCTATAGTATAAACATCACAAATGGAAAAG
TTCAATTAGAGGTGTGCTTTGTTTACGTTTTTTTTAATAATAATATCAAC
CCAGCTAACAAAAATTGTTATTTGAAGAAATGCAATAATTTTAACTTCTC
CTGCCCTTCTCCTGCCCTCTCCTTGCATCTTGTTAGAAACAATTATAAAT
GGGAGGTATAAATCAGGATTATACTAGAAACAAATCCATAAGTGATGTAA
ATTTTTTTTCTTCTAGACATCACTTGGTGGCCAAATGCTGTTTTCTACAT
CAGTACGTGAAGATTCAGTTCCCCATTTTTGTTTACGTTATGATGTTGAT
GGAATCCTATGGCAACCTTCTCGTAGCAAAACAACCTTTTGGGTTCACAT
TGCAACCATAGATGCCTTTGGTTATGTGCTAGCGTCTAAACAGGAACATA
AGTTTGTTGGTTGTTCGCCTGATTTCAGTTATGCTGTGATTACAGATTGT
AAATCAAATGTTTATGTATACGAGTGTTCTCAAGGGCATTCTAAAAAGCG
TGCACAGTATGTTGCAAGTTTCAGAGACAGTGATGAAATTTTTGGTTGTA
TTGTTGCAAAGAATAAATTATGTGTATTAACAGATAACCATGTACATATT
TTAGAGCTACCTGACCCAAATATGGATACAAATGAGCGTTAG Coding sequence (CDS) from alignment at sc0000092_pilon:935061..938402- >XLOC_034796 ID=XLOC_034796|Name=XLOC_034796|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3444bp|location=Sequence derived from alignment at sc0000092_pilon:935061..938402- (Clytia hemisphaerica_ch_hm2_pilon)
AATTTTTACATAAAAAGCACGATGTCCCCTCGAGCGTTGAGACCAAAAAG
AAGTTTGATAAATAGTGATTTTGAAGGTTATAAACTAAACACAGATGGCT
TAAAAGCAACATCTAAGCCACTTTTATCAAAAGTGTACCAAGTAAAGAGA
GATCCAAATAAATTCACTTTCAACTATGTCAAGCGTCAGCTAATGCACAA
TCATTTGTTTTTCAATCAATGGAGCAATGATATCTTTTTTGTTGATGAAA
ACTTAAACATTGTTCTTATACAAGCTGAAAAGAATTTTTACATAAAAAGC
ACGATGTCCCCTCGAGCGTTGAGACCAAAAAGAAGTTTGATAAATAGTGA
TTTTGAAGGTTATAAACTAAACACAGATGGCTTAAAAGCAACATCTAAGC
CACTTTTATCAAAAGTGTACCAAGTAAAGAGAGATCCAAATAAATTCACT
TTCAACTATGTCAAGCGTCAGCTAATGCACAATCATTTGTTTTTCAATCA
ATGGAGCAATGATATCTTTTTTGTTGATGAAAACTTAAACATTGTTCTTA
TACAAGCTGAAAAGGCTGAATTTCAGTATTATACTGTTGCCAAACTTGAA
AGCCATGGAGAAGATCTGAACAGTTTCAGTCCAACAATTTCTTTTCCAAC
AGAAAATCTCTGCATCACATCATCAGGATGCGGTATTCTTCATTTGATGA
AGATTCACAAGGATGGTCAATCAAAGCAATTCCGCCCATTAGCCACAGGA
CTAATTCATGATTTCAACACACCCATATCCATTCTCAATTCACATCACGA
CCCAACAACCAATATAATACATGTTTTGGTTCTTTCCTTAAAAGACTTTG
AAGAGGATGAAAAATCTGTTTCTTACGCGCTTTTGCATTGGCTTCAAATA
TCAAACAGTCCAAATGATGACGTTGAAAGTACTGTCCGAAATTGGAAAAC
TTTCAAAGGCCGTAATTTGCCACGTGAATGTTGGCTGAGTGAGGATTACA
CTGAGTTGTTTGTGGCTTCAGAAACTGAATTTGAGTTGGTCAATGTAGTA
ACATATGGCTGAATTTCAGTATTATACTGTTGCCAAACTTGAAAGCCATG
GAGAAGATCTGAACAGTTTCAGTCCAACAATTTCTTTTCCAACAGAAAAT
CTCTGCATCACATCATCAGGATGCGGTATTCTTCATTTGATGAAGATTCA
CAAGGATGGTCAATCAAAGCAATTCCGCCCATTAGCCACAGGACTAATTC
ATGATTTCAACACACCCATATCCATTCTCAATTCACATCACGACCCAACA
ACCAATATAATACATGTTTTGGTTCTTTCCTTAAAAGACTTTGAAGAGGA
TGAAAAATCTGTTTCTTACGCGCTTTTGCATTGGCTTCAAATATCAAACA
GTCCAAATGATGACGTTGAAAGTACTGTCCGAAATTGGAAAACTTTCAAA
GGCCGTAATTTGCCACGTGAATGTTGGCTGAGTGAGGATTACACTGAGTT
GTTTGTGGCTTCAGAAACTGAATTTGAGTTGGTCAATGTAGTAACATATG
AGAGATTGCACACTGTAAGTTCACAAGATGAAGCTGAAGATACCATCAAA
TACTATCATTGGCATCAATGTAAAGAAATGCTGACCATTGTTTTCGACCT
CACACTAACTCAAGATGAGGTGGAATGCCAATTTCTTCACAACTTTTTGT
CCATTAAACTGAAAACTGGTAAAACTCTGTTGGAAGGGACATTGGAAAAA
ATGATTTTACAGGATGCTTCAAAATGGTATATTCAAGAAGGAAGAGAGAT
TGCACACTGTAAGTTCACAAGATGAAGCTGAAGATACCATCAAATACTAT
CATTGGCATCAATGTAAAGAAATGCTGACCATTGTTTTCGACCTCACACT
AACTCAAGATGAGGTGGAATGCCAATTTCTTCACAACTTTTTGTCCATTA
AACTGAAAACTGGTAAAACTCTGTTGGAAGGGACATTGGAAAAAATGATT
TTACAGGATGCTTCAAAATGGTATATTCAAGAAGGAAGATTAGAAATCGT
GTTGGTCAAGAAAACACCGGGTGAGTTCTGGTCATCGGTCATTCCTGATG
AAAAGCACGGTGTCCATGATATTGAGGGAGAAGAGCTTGAAAGAATGAAT
CAAATACATGAGCAGCTGGAACACTTAACTTCTGAAGGCATTCAAAGGAT
TAGAAATCGTGTTGGTCAAGAAAACACCGGGTGAGTTCTGGTCATCGGTC
ATTCCTGATGAAAAGCACGGTGTCCATGATATTGAGGGAGAAGAGCTTGA
AAGAATGAATCAAATACATGAGCAGCTGGAACACTTAACTTCTGAAGGCA
TTCAAAGGGAAGAAAAACATGCAAAAGATTTCAACATTCAACAATTAGAG
GAATGCGATGAGAATTTAGAAGAAGAAATCAAAGTCTATAGTATAAACAT
CACAAATGGAAAAGTTCAATTAGAGGAAGAAAAACATGCAAAAGATTTCA
ACATTCAACAATTAGAGGAATGCGATGAGAATTTAGAAGAAGAAATCAAA
GTCTATAGTATAAACATCACAAATGGAAAAGTTCAATTAGAGACATCACT
TGGTGGCCAAATGCTGTTTTCTACATCAGTACGTGAAGATTCAGTTCCCC
ATTTTTGTTTACGTTATGATGTTGATGGAATCCTATGGCAACCTTCTCGT
AGCAAAACAACCTTTTGGGTTCACATTGCAACCATAGATGCCTTTGGTTA
TGTGCTAGCGTCTAAACAGGAACATAAGTTTGTTGGTTGTTCGCCTGATT
TCAGTTATGCTGTGATTACAGATTGTAAATCAAATGTTTATGTATACGAG
TGTTCTCAAGGGCATTCTAAAAAGCGTGCACAGTATGTTGCAAGTTTCAG
AGACAGTGATGAAATTTTTGGTTGTATTGTTGCAAAGAATAAATTATGTG
TATTAACAGATAACCATGTACATATTTTAGAGCTACCTGACCCAAATATG
GATACAAATGAGCGTTAGACATCACTTGGTGGCCAAATGCTGTTTTCTAC
ATCAGTACGTGAAGATTCAGTTCCCCATTTTTGTTTACGTTATGATGTTG
ATGGAATCCTATGGCAACCTTCTCGTAGCAAAACAACCTTTTGGGTTCAC
ATTGCAACCATAGATGCCTTTGGTTATGTGCTAGCGTCTAAACAGGAACA
TAAGTTTGTTGGTTGTTCGCCTGATTTCAGTTATGCTGTGATTACAGATT
GTAAATCAAATGTTTATGTATACGAGTGTTCTCAAGGGCATTCTAAAAAG
CGTGCACAGTATGTTGCAAGTTTCAGAGACAGTGATGAAATTTTTGGTTG
TATTGTTGCAAAGAATAAATTATGTGTATTAACAGATAACCATGTACATA
TTTTAGAGCTACCTGACCCAAATATGGATACAAATGAGCGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000092_pilon | genome | sc0000092_pilon:935061..938402 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1297-1722:427 |
| Aaloc | 1180-1296:749 |
| Aaloc | 1021-1179:1641 |
| Aaloc | 778-1017:2090 |
| Aaloc | 283-774:2940 |
| Aaloc | 1-282:3343 |
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