XLOC_034793 (mRNA) -

Overview
NameXLOC_034793
Unique NameXLOC_034793
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000092_pilon:834992..837145+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034793 ID=XLOC_034793|Name=XLOC_034793|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2154bp|location=Sequence derived from alignment at sc0000092_pilon:834992..837145+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAgctttataattttcaaaattgaaaatgacatGGTACAACGAAGGAAA CGTCGAGTCAGATCTTGATATACTTACTGGACATAGCTTTGTCAAACGAG TATGGTATAACACCGTTCGGCCACACCTTAAATTCATGGTTCGTGGCCGC ACGTCGTTTTCTGTGCTGTTGATGTTCAGTCATGAGTTGAGATTCTGGGA TAGGAGCATCAAGCACATAACCTATGAATGAAAAGAGTTCAAATGAATCT AGGGGCTTCTAGATTTTAAAAACAACCAAGCAATCTATTTTGGTGTTATC ACCATCTTCAAGCTTATAACTTGTTGTATATGCTGGCAACCCTCTCGGGT AGATTTATGTTATTCATGAATCTTGGGAAGTTAGATCTATCAGTGTCTTT ACCAGACAGAGACggctgttttcttttcttttctggaTTGACTGAGGCGT GCACTCCTTTTCCCCACCTACTCCATTAGGTTAGATTTTTCATGAGCATG GTGGTAACTGCCCGCAAGTGTAAGAGTAGAGTCAGTATCATTTTTTATGA AGCGAGTAGCATCTTTTACCATGTTAATTTTATTCTTTTCAAGGTTTATT GGAGAGGTCTATCCATGTAAATAGTGCCTTAGCACCACCAACCGAGTTTA CAATTTCATGACGTGTAAAGAGAGCCTATACTACACTGACTTCATAAATG ATGCTAATACATGAAAAACAAATATCGCCCAGATGATAAGTTTTTTGGGA GAATGCTTTCTATTGATAAAAGAGATTTGTGAGAGGCTTAGATCATTCTT TGAGTCTAAGTGTAAACGACATTTTAATAACTTGTCAAGAAAAAAGATTT AGCGAAAAACTAACAAAAGACAACTATTTTTaccagaattttatttttgt aagcataagttctttaaatctttcctttgaaattttacagaCATTAGATG TACGTTGCTTGGACTCACAAAGACACTCTCAATCTTGCTCAAAGCTACTT CCCAATAAATTCTAAGGCAAGATATATACAAGAGTGTGGAGAGGCTGATG GCTCAAATTagataaaatttgctaggaattcgagaaaaaaatttaatttg ctcaaaagtggggaggctgaagtctccccagtctccccgcttccaccGGG CCCGATGCAAAGTTTGTCTTTGAGAGTCTATGCAACGTACATTTAACGTC CATCTGGGTGGTCCGGGTAAAACACAATGTACTGAAATGATATTTTGGGA AGGAAGGGCGTCAGAGGGTGTCCTTTAACACGTAGGCATCAATTTGAGGG CGTCAAGGAAATCATCCCTTTGAACTTGCATGTGGTTTTAAGAAATAGTT TTACGCGCTAAAATAAACATAGCAAGCGGATCTCGAGGAAATGAAATCAT CGATGATTGATAAAAATAGATAGtaattttgttagtattggtggTTTCAA GACTAAATTGAACATTCTAGAGCTACTATATcattagacgatgttatcgt ccgttacagtgatagtaaaggcgggaaaatatggcggtatgggcATTATG GCGGTCTACGGGAAAAATCGGcggtagagtttcgaagaaagactggcaac tctaccgactgtaaactcttttcggcaaaaaaacccgtttgcgaattttc ttcggccttgggcttttttcttagatagtgattcgtcttagactataaca tagtctactATATCATATCACCCTCGGGCGCCCAAAATTTTTCACCCGAA TCTTTCCAAAAACGCCCACCGCCCATAAAATTTCTTCCACCCATCCGctc attcaagaaactttttgactttttcaagacttttacttttttctcagaat ttttgactttttctttgactttttgactttttttttactttttgtagaGG TATGTACGATAATTTGCCGAGTGATTGACCCCCGGTCGCTTCGCTTTTGC CTGAGATATCATCATGGATTCTTTAACTTTCAGAACGTTGCCTCGATATA TGACTCGCATAAATTATCAAGATTTATCATGAATTAATCATAAATTACCG GCAGCTCCACAGCCTTGTCCACCTGCATCCAACATGTCATCGTCGAGGTT TACATGATCGAGACAAAGTACACCTTGTTGTTGTTGGGACATCAAGGCCA ATAA

Coding sequence (CDS) from alignment at sc0000092_pilon:834992..837145+

>XLOC_034793 ID=XLOC_034793|Name=XLOC_034793|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=654bp|location=Sequence derived from alignment at sc0000092_pilon:834992..837145+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAgctttataattttcaaaattgaaaatgacatGGTACAACGAAGGAAA
CGTCGAGTCAGATCTTGATATACTTACTGGACATAGCTTTGTCAAACGAG
TATGGTATAACACCGTTCGGCCACACCTTAAATTCATGGTTCGTGGCCGC
ACGTCGTTTTCTGTGCTGTTGATGTTCAGTCATGAGTTGAGATTCTGGGA
TAGGAGCATCAAGCACGTAgctttataattttcaaaattgaaaatgacat
GGTACAACGAAGGAAACGTCGAGTCAGATCTTGATATACTTACTGGACAT
AGCTTTGTCAAACGAGTATGGTATAACACCGTTCGGCCACACCTTAAATT
CATGGTTCGTGGCCGCACGTCGTTTTCTGTGCTGTTGATGTTCAGTCATG
AGTTGAGATTCTGGGATAGGAGCATCAAGCACATTACCGGCAGCTCCACA
GCCTTGTCCACCTGCATCCAACATGTCATCGTCGAGGTTTACATGATCGA
GACAAAGTACACCTTGTTGTTGTTGGGACATCAAGGCCAATAAATTACCG
GCAGCTCCACAGCCTTGTCCACCTGCATCCAACATGTCATCGTCGAGGTT
TACATGATCGAGACAAAGTACACCTTGTTGTTGTTGGGACATCAAGGCCA
ATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_034793XLOC_034793-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000092_pilongenomesc0000092_pilon:834992..837145 +
Properties
Property NameValue
Aaloc220-330:2044
Aaloc4-219:1