|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:690753..695710- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034786 ID=XLOC_034786|Name=XLOC_034786|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4958bp|location=Sequence derived from alignment at sc0000092_pilon:690753..695710- (Clytia hemisphaerica_ch_hm2_pilon)
GGTATGAATCCACATTCGAGTCGATCAACTCGGTCTAACTCACCTAACCG
TCACTTACAACAAACAAACACTGGACAAGACCCATACTCAATTCGATCAA
CTCGGTCTAACTCACCTCACCGTCACTTACAACAAACAAACACTGGACAA
GACCCATACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTT
GCATGAAACTAACACCGGACAAGACCCATACTCAATTCGATCAACTCGGT
CTAACTCACCTGTCAGACATTCAGAAGCGAGTAGTTTGTTACAAGACCTA
CAGTTAGCCAACACAGGACCAAATCCGTATGTTTCACCAATAACAACAGA
GTTATCAACTCCAGAAGATAACTCCTCTTATTCTTCACTTAATCTTTCAC
CGAGACCACACAGAAAACAAAACGCCCATTCGACGCCTTCCTACCCGCCT
TCACACTCGATTCTTACGCCACCGACAACATACGCCAGATCACACAGCGA
TAGTCAACACCCAAACACGGGTGTCAACATTGGACAAACAGAAGGGTATA
TTCAATGCGCTGTTGCGGATATAGAGAAAATGAAAGAACAGGTAATTCTC
TTCTTATTTTTAATACGCAATGTTATTTCAACATACATCTAAAGTTTATT
GTTTTGACGTGTTTTACACCCCTGTCTCAGAGTACCGGTGGAAGTTTTTT
CCCCGACATCAGGGCATAAAAATTCTGGATAAAAATCTTTATGGAAATCT
CTATGGAAATCTAAATGGGGAGAAATTCTACTGACTCAAAAGTTCCAGTT
GGGATGTTTATGAAATGCAATTTCCTTTGGACTTCAAATCGGGATGAACT
TAAGGTCAATTTTTCAGTGGGGCTAAAATAGTAGTGTATTTTTTCAACAG
GGACGACATTTTACAGTGTGGCGGGGTATCAACAAGTTTGTGACACTTGG
TGTATTACACAAAAGTTCCTCAATAGTAAAACACCCCCTTCTCACATACC
CGGTAGGCTTTTTTCAGCCAGTGGGGATAAAAATAACGGACTTAAACTCG
ATGGGGATTGATATTCCCACATTTGTTATGCCTGGGGATTTAAATTGTAT
TGTTTGCAAGTCAGAAAAATTCAGTGAGGACGAAATTTGGGGGTTAATTT
TCCATCGGGGACGTTACTTTGGCAAATTTTTTCTGTGGGAAGGGGTCCCA
GTGGGTCTATGAGAAGGAGGTGTAGTAAATCAAATTTTGTTATATTTTAA
AGATCAGATCATTCAAGGAGCAATACGAGAGGGAGAGAGAAGAGAAAGAA
AAGGAGAAATCGAAGAACAAAAATTTGAAAAGGAAGTTGGCAGAAAATGA
AGAAGTCACATTTCAATTGCATCAAAGAATTGACATGTTGGAGAAGAAAA
TAAAGAAGATGGAAAGAACTGATAAAGTGGAACAACAAAGAAAGGTATTT
TCCCAGTTGACACCCCTGTCTCACAGACCTGGTGAGACACCTGCCTCACT
GGGGAATTTGGCCAAAATTTCATCCCAATTTTGCAATTCAACATCCACAA
TCAACAATGGAATTTTTTCGACTAAAGAACAGTATAATTTCTAACCCAAT
TAAAATTTCGATACAATTTCTATTAGGGCTGTGAGACAAGGATATACCAG
TTGACAGTGGATATTAATTAAGCTATGCTCATCTGACCTCGCAGATGATT
ATAAAATGCTATTAAAGATTTGGTATTTTGCGGTATATGTCTAGTCTCTG
GCGTTTTATAATAACGTGAGATGAACGTTATGTTCACGTTTGTGTTAAGT
TAGATTTCTCACAGTAGTGTGCTAGCCGGCAGGGAGATGTAGAGGGAGAT
GTTCGTCAAAGTAGAAATTATTTTAAGGGGCACTGAATTGAGGCTCATCT
TTGACTTGATACTGTTAGCCCCCTTTCCTCTTCCCATCTCTTCTCTTCAT
CTCTATTTTTGGATGTTGGAAAGTAACTTTCAAGTTGTTTATTTTTATAG
TGCAACATTTTTCGTAAAGTTAAATAACCGCAAAAATGTACCACAAAACA
AAACAGTAACCTTCTCAATCGAAAATTAATTAGTAGAAAGTCGTACGGCC
GCAGCCTTTTTAAATATTTCCCGTTTTCCAAAAGGGAAATATTTGTTAAA
ACGGGCTTTCTCCTTCATAATAATAATAATAATTTCCCGTGTCAAAACGC
CTTCCGTACGCCCTGACTGACGCCCGTTTTTAATTTCACAGCAAAAAATG
CATCCAGTGAAGTATAAGTAATGTATCATGATTCGAGTCGACTGATAAAC
TATATATATAATATATGTTACAAGTTCCTTACGGATTCTCAAGCCCGGTT
ATAATAAAACTATTACATGTTAGTAGTTGACCCGACTGGCAGTTGTTATG
TAGCAGGTTGAAACATGATTTTTTGCTAGAAAGATGCAGTTTGTTTTCAA
GTTAAATCTTTAAAATAAATCAAACTGTGTGGGTTTCTTTACTTCCAAAC
AACCTACCAATAGTTTTGGAACACTCCATAATAAAGGAAGATGGCTGTTC
TTGTGGATTGACTTTCTGGTTACCCCATATAAACACGATGTGACATGAAA
GTGAAGAGACATGATTTGTTGGTTATTGTTTGATTTCTTGACTTGTATAT
CTCATGGCAAATGGGATAGCAAATGACTTTTCATGTATTGCTTGGCTCTA
CATATGATACCTCTAACTTTGCACAATCCAGAATGTTGAAAAAAGCATTT
TATGAGATAAGTTTCGATTGTAATTTTCATGGAAATTTTTAAGCGACAGA
TTTGACTTGGCTTCAGTTTTGTTTGGTTGATAAATCTTTAGCTTCACCAT
GACCGTGGGATGATTTTCAATAAACTTTTGTTGTTATACACAGTCACTCT
ACACATGATGACTCCAGCCATGATTGGTATCAGACAGTCAGAATGTTGGA
AAAAAGACATTTTACGAGAAATTGATGATAGAAATTATATTGACTTGTTT
TTACAATTTTGGTGGTGTGGGTTTTGTTGATTGATAATGTTTACACCGTG
GGATCCTGTTAGGGTATATTGATTGTTGTTTTTTGGAATACACCGTTTAA
CAGTCTCGCCATCTCCACCGTACCGTAGAGAGGCGGGAGGTAGAAATGCT
CACTTTAGTACTGTGGAAGGTTAGAGAGATGTAAACATTGCCATTTTTTT
CCTTCCTTTTTAAAGAGAATGTTTTAGATGGTTGAACATGATATTAATGA
CAATTTTATGTATCTCTCCTGAAAATTTCACAAAAATTCATCAACACAAG
AGGAAAAGAAGTTATGATTAAAAGGAGTTCTTTACCTACCATTTCTCTGC
TGGGTTTTCTTATGAGAACTGGATGTTTACCTACCATTTTTTACGGGGGA
GAGTGAAGTTTCTCGTGGTTGCCAAAATCAAAACAATAGAAAATTGTTCA
TACGCGTGCGCAGCCGACACTGTTAAACGGTGTATTGATTATCAAAAAAA
GAGAACCTTTTTTTGATAAATACTTTATTTTTTTCATGAACCATGTGGAT
GGTTGACATCTTTCTCTAGTCTAGTGTTGTAAACCAATGCAGTCTCTGTT
TTCAAATCTTGAATTCTCTATACCTACTGAACTAAATATACCTTTTTTTA
AAGAGGCAGCCATGTTGAATAGTTATGTACTCCAGCATAAAAACAATGAC
ACAGCCATGCATAATTTTTAAAATATACATGATACAGTAATTATGCATGG
CTGTATCATTGTTTTTATGCTGGAGTACATAATTATTCAATATGGCTGCC
TCTTTAAAAAAAGGTCTACTGTTTAAAGCTATTTAAATGCTTTAAAACTT
TGAGCCACAGTTTTTTCTTTGTTGCTATTAAAGATAGATTCTTACTTTGT
CGTAATGTAAATTTATTGTAAAGTTTTAGTTTTTGAGTTTAGTTCATCTG
CAGTAGTATTTTTTCAGTGATCCTTAAATCTTGTGAATAAAGTAACATTT
AACCAGACTTATTGCCCTCATTATATTCAAATTTGTATTTTTTTTAGGAC
TGATAAGTACATATTTTTAAACACCAAAACAAAGCAAACAACATGCCAGT
TCTTTCTGGACAAATATATATTTTATTTTTATTTCCGTCTCTTTAATCAC
TCTTTATGAGTATATATAAACACATCTAAAAAATATAATATACTTTATTA
TGTGTGCTTTTTTATATATGTCAATAATGATCTTCATTTTTAAGGAAATA
TTTAGTCGCAATTTTGCGATTCTTGTTTGCTTTCAAAAGCATACTAATCA
ATTTGTCTTAAAAATTGGGGAAATCTAGAATGTTCTTTAAGTCTTTTCTG
CAACGCATAGCGTTCTAAATCTGATGTCTAAACGTGCATTACTGTAATTG
ACGTCAGAATGTCTTTTTACCATATTAGATAAATTTGCAATAAATGAATT
TAATTTAAAACTACTATGTAAAATTGCTAAGCTTTACAGAAACATTTTCA
GGGAATGTCATTTTTTTTCGGAAATTAATTCCACTCGAAAATAAGGCTGG
TCCGGAAAAGCAAAATTTAACAAATTGTTGGGCAAATAAAAAGTTAAAAA
TGAAACTAAAATGTAACAACAAATTTTTTTACTGACGTTTCGACGGTGTG
GTAGGAAAAACGTTGACGGAAAGTTGGAATAATTAGGTATCCTCTGAACC
TCTGCCGGAAGAATAATAAGCTCGAAGATTTGTAAATTAAATATTTTCTT
TCTACAGGCTGATCTTATGGGGCGAGGTGCTTTCCCGAGAAACGAGCTTG
GTTTCACTGGGTATAAAGACGAGAGGGATTCCATGGCACCTAGATATCAA
CAACAACAGCAACAACAATTGCATCAACATAATCGAAGGGAATTTGAAGG
TGGAACTACTGAACTCAAACACCAAAAATTCCGACAAATTTATCCCTTAA
TTTATTGA Coding sequence (CDS) from alignment at sc0000092_pilon:690753..695710- >XLOC_034786 ID=XLOC_034786|Name=XLOC_034786|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000092_pilon:690753..695710- (Clytia hemisphaerica_ch_hm2_pilon)
GGTATGAATCCACATTCGAGTCGATCAACTCGGTCTAACTCACCTAACCG
TCACTTACAACAAACAAACACTGGACAAGACCCATACTCAATTCGATCAA
CTCGGTCTAACTCACCTCACCGTCACTTACAACAAACAAACACTGGACAA
GACCCATACTCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTT
GCATGAAACTAACACCGGACAAGACCCATACTCAATTCGATCAACTCGGT
CTAACTCACCTGTCAGACATTCAGAAGCGAGTAGTTTGTTACAAGACCTA
CAGTTAGCCAACACAGGACCAAATCCGTATGTTTCACCAATAACAACAGA
GTTATCAACTCCAGAAGATAACTCCTCTTATTCTTCACTTAATCTTTCAC
CGAGACCACACAGAAAACAAAACGCCCATTCGACGCCTTCCTACCCGCCT
TCACACTCGATTCTTACGCCACCGACAACATACGCCAGATCACACAGCGA
TAGTCAACACCCAAACACGGGTGTCAACATTGGACAAACAGAAGGGTATA
TTCAATGCGCTGTTGCGGATATAGAGAAAATGAAAGAACAGGGTATGAAT
CCACATTCGAGTCGATCAACTCGGTCTAACTCACCTAACCGTCACTTACA
ACAAACAAACACTGGACAAGACCCATACTCAATTCGATCAACTCGGTCTA
ACTCACCTCACCGTCACTTACAACAAACAAACACTGGACAAGACCCATAC
TCAATTCGATCAACTCGGTCTAACTCACCTCACCGTCACTTGCATGAAAC
TAACACCGGACAAGACCCATACTCAATTCGATCAACTCGGTCTAACTCAC
CTGTCAGACATTCAGAAGCGAGTAGTTTGTTACAAGACCTACAGTTAGCC
AACACAGGACCAAATCCGTATGTTTCACCAATAACAACAGAGTTATCAAC
TCCAGAAGATAACTCCTCTTATTCTTCACTTAATCTTTCACCGAGACCAC
ACAGAAAACAAAACGCCCATTCGACGCCTTCCTACCCGCCTTCACACTCG
ATTCTTACGCCACCGACAACATACGCCAGATCACACAGCGATAGTCAACA
CCCAAACACGGGTGTCAACATTGGACAAACAGAAGGGTATATTCAATGCG
CTGTTGCGGATATAGAGAAAATGAAAGAACAGATCAGATCATTCAAGGAG
CAATACGAGAGGGAGAGAGAAGAGAAAGAAAAGGAGAAATCGAAGAACAA
AAATTTGAAAAGGAAGTTGGCAGAAAATGAAGAAGTCACATTTCAATTGC
ATCAAAGAATTGACATGTTGGAGAAGAAAATAAAGAAGATGGAAAGAACT
GATAAAGTGGAACAACAAAGAAAGATCAGATCATTCAAGGAGCAATACGA
GAGGGAGAGAGAAGAGAAAGAAAAGGAGAAATCGAAGAACAAAAATTTGA
AAAGGAAGTTGGCAGAAAATGAAGAAGTCACATTTCAATTGCATCAAAGA
ATTGACATGTTGGAGAAGAAAATAAAGAAGATGGAAAGAACTGATAAAGT
GGAACAACAAAGAAAGGCTGATCTTATGGGGCGAGGTGCTTTCCCGAGAA
ACGAGCTTGGTTTCACTGGGTATAAAGACGAGAGGGATTCCATGGCACCT
AGATATCAACAACAACAGCAACAACAATTGCATCAACATAATCGAAGGGA
ATTTGAAGGTGGAACTACTGAACTCAAACACCAAAAATTCCGACAAATTT
ATCCCTTAATTTATTGAGCTGATCTTATGGGGCGAGGTGCTTTCCCGAGA
AACGAGCTTGGTTTCACTGGGTATAAAGACGAGAGGGATTCCATGGCACC
TAGATATCAACAACAACAGCAACAACAATTGCATCAACATAATCGAAGGG
AATTTGAAGGTGGAACTACTGAACTCAAACACCAAAAATTCCGACAAATT
TATCCCTTAATTTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000092_pilon | genome | sc0000092_pilon:690753..695710 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1000-1200:202 |
| Aaloc | 808-999:3707 |
| Aaloc | 217-807:4959 |
|
