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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:67003..74690+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034784 ID=XLOC_034784|Name=XLOC_034784|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7688bp|location=Sequence derived from alignment at sc0000084_pilon:67003..74690+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCGTCACCCGAGGTATTAATTCAAGAGCTTGAAGAGACAAGAGA
AAAAGCTTTGCAATTCGAACGCACCGCAAGATGGTGGAATGAGTCGTGCG
Tgaaatggcgcgaaaaatggggtaaagaaaatgcagagaaaaacagactt
atcgaaaaaattgaaaacttaaacgggcgaaacCGTGCTTTGATAGTTGA
GTTTCAACGTGTACAATgcgaaaatgcaaaattaaattcttacATCAGAC
AACAAGAGGGGTTTAAAAAAGACATTGAACAGACTGTCAACCGAGCTTTA
AATATCCCTGAAGATATCAAAGAAGTAGATGAAGAGAGAAGAGTTGCAAG
GGTAGAACCAATTGTGGAGGATATACGTTTAGCAAAAACAATGAGTAATG
CGTCACCGACAACATCGATAAGATCAAGTACGGGGAAACTTTCTTTTAGT
CCACTGAACGAAGTCCAGGATACCTTTGAACAGATTTCAATGTTACCCTC
TGGAGAATCGTTGGACAGTATTGAGAATGTCTCTGAGAAGCGGTTGGATA
GTTTTGAAAACATCTCTGGAAAGCCGTTGGATAGTTTTGACAAAGTTTCT
GGAGAACCTCTAGATAGTTTTGATGATTTAATCGCACCGTGTGCTGCTGA
GAAAAGGTTCTACTCAACAAATGAAAGTTATCCTAGTCTTCAAGATGAAC
TAACTGATTTGAAGAGATTGATTGAGAATTTGGAATCAACAAGCTCAGTA
GATACACAAGAAGAGAAATCATCGATGTTTGGAAATTTATTGGAAAAAGT
TGAAGGTTATTTCATGGAATGTGACAATtatgttcaagaaagtaaaaGGT
AGAGTTCGGAAACCAATAGTTTTATGAAAAGGGTACTGTACCCATCCTAC
ATTTAGGAGGACCGTCATTTTCTCTGTTGAGTCTTTAAGCTTATCTCatt
gaaagatttataaaatcATAGTGCTCGATGCACCCCTGTGTCACTAACCC
CGCATCactggaaattgactttgattgcaTCTCCATTTTAAATTCAACGA
AAGAAATTGCATTCCAATACCATCCCACTAGGTTTTCTATTGGAAAAATA
GAAtatctatccccattgagatttcgataaaaaaatttcattcccACTGT
TGGAAGAATTACCacctgtgagacaggggtgtctcaaTGTCTAAGGGAAT
CACCAAACGGCACATCGTCACCAAAAGCCACAGTCGAAAGTAACCCAAAG
CTCCTTTTGATAGCtgtctacctgaaggtagggaATTACACTACTTTCTG
TGCCTGAGTTTCCCCATTTACTGTATTTGCCATTGATCACTCTCCTCAAT
AGACTGCTAGCGTTCTCTAACAAAATTATCTTATCTAATGATTATTTGAG
ATAAGATTTGGAAGCTAATATTTCATAACCAGAAGAATACTAGCCTACTC
ATTGCCCCTCGGGCCTCGGGATGCCCCGTAACCTTTTTCGTTATATATAT
TCTCAGAGAATTGGAGGCAAGTCGTGCTCTCAACGACATTATCAAGCAGA
CAAACAAGAAGAAACAAGATCAACCATTCTCAATAAATCATAAAGAAACA
CAAACTTCTGGTTTCCAGCTACCAAATCTCTACAGTGGTGCAGCCGATCT
ATCAGCAGTTTTATCGTCATTAAGTAGTATAGATTCTACTGGTCGTAACA
TATCCTTCAATAGTGGTCTACCTTCGATCGGTATGATGTCAGTGTTATCT
TCATGCACCAGTATTGAGTCTGGTGATAGATGTACCTCGGTTGATGTTGT
GGTCAGGGATTTACGTGAAAATGTAAGCAAACAACCATTTGAGCTTAAAG
CTGGATATATAGGAAGAGAGAAACCTTCAACCTTTcataagaaaaagtga
agccttaagatttgcgctGCTGTTGGGATGACGGGTTGAACCTTGCGCTT
TTCTTGTTTTCATGTGGTACtttttttGAAACAACGTGACAGATCTCATT
TTTAATCCAGCGTTTGTGTGAAATGCGGCCTACGTGGCCAATGCGTTTTA
TATGAGAATTTTtggcaacaattttttttatagtcCTCTTAAGAGCACGG
AATTGACTCTATAGTTTGGTGCTGAAgttctaaatttacaaaaactcTTG
CGGTCATTTTAAAATTAACTTGCAATAACTTTAACTTTCGTTAGTAAAAG
CCTCATGTATTGCTTCAGCTTATATGTTGGTGAACTCTCTCCCATTTgag
cttttcctttttttaaaatttgactacTCTTCAGCCATCGCCATCGAATc
ctgttattttttgttttttaattcgaACAGTAACACTGAaagcattgggc
tcttccagaaaaaattcgttcaaggggggggggggtggaggatatattat
tttttcaataatcgaccccctggacattgcaagtTCACCCCATAGAgcat
ggcagtttttcaggattttctcgaTACAGGGGTATCAGGTTTTATGGACA
ACATATCTTCCACCTCCCATgaacgttttttttctggaaaagcccaatta
tcGTAAACgaaaaaaatcatgaatatgaaattcatgatattcatgacgta
atgttttctacggaaacgcCCAAGTTTTAGCCGGTAGTGGCAagtttaaa
ctagacaaaagttgtataaaatttgccactactggcaaaaaccggggtct
ttccgtagaaaacattacgtcatgaatatgaaattgatcaattttcttct
ctttttcgaACGAAAGATCCAACGATTACAAGAGGAGAATTCGAACGAAT
GGTCGCTAAGAGAACAAACGGAAAGTGAATTGTGTTCTATCAAACGTGAA
TTGAAACAAGCTGAAGCTACCATTAAGGTAAGAAACTTTAATTCGCCTCG
TACCAATGgattccagaaaattttcgtacatgggggtggaggatgtattg
aatattttgtccgggggggggagtgaaaaatctacaaaatttgccttgtt
tgggGGCAAATCTGCTCTGTTTAAGGAAATTATGAATGTctggggggtca
aaagtcacaatgtccggggggtaaatttccaaaaaaatcctTCACCCCca
cccatattcaatttttttctggaagatcccaatctcgttccctgcgtatt
agtATTACTCAGCCCTTTTTTGCTTACTGATAGCAGCAGATAATTCtatg
gcgtccatcagtaacgtTAATAAAGCTTGAAAACACGGGGGCGAGGTTAA
TCGCCTCTTATAAAGGACCAACAATATACAATTTACAGACAGATTTCCTA
TTTATTCCAAATATTGGGTAAGTATTCTTCTTACAGAGAAAAACATCAAC
AACCGCGCTCTTGGGGAATCATACGTTAAGGGAAGAATTTTTGGCGGGAA
TTGAATTTTGTGGATCTTGGCCGAATTCGTGAAAATCTCTTCCcgccaaa
tttctttcattgagGTATCGGTTCGAGGTAAGGGGtacaacccagctggc
acacaacgttgtttcaacgttcatctaacgttatatggacgttgtgaacg
ttagataaacgtcgaaacaacgttgtgtgacaGTTGGGAACACCCATATC
TGTATCATATTTTTCTAGGATTTGCGAGAAGAGGCATGCAAGAAAGAAAT
TGCAAGGCATGAAATCCAAAGTTTGAAACTTTTGAACGAAGAGTTGGATA
AGAAATCGAAAGAATTGATCGAAGTGAAATCAGCACACATCAAACTCAAG
AAATCCTTGGAAAATAGAGTAAGATGCGGTATTCAATTTTGGATGGGGAG
ATGGGACAATAAAGAATATTCATTGTCATTTAGTGTTACCCCtctgtcac
agacccgctgggaccccagccccactggaaaatatagcaaaaatttcgtc
cccggtatgCACCTATCAACCCTTGCGTCAGAAGCTGTAAAAAGGGACTA
TTTGCTATTGTTTTGGtttttgacacctaaatattcaaaatcgGATTTCC
GAAAAGTAGTGTTTTTTAAGAGTAGACGAGGAGGGGGGAGTGACAAAtaa
ggatgaaatattttaaacaaattctTCTTATTAAAGACGAACATCTTTGA
ATTtgatcgttaaaaaaattgaatatatgCTCTaagacatgcgcgataaa
atttatatattcCATCCTCACAGGTTAAATTCTGAGAATGATGAACTGCC
CAGCAGGCACACTCActtaacgttgtttcaacgtttatctaacattatat
ggacgttgcaACAACGTTGTGCGCCAGCTGGATGTGATGCTCATGGTAAA
AAATTCGGGTCGGATCGGTTTACTAATGTTgctaacgtccatataacgtt
aggtgaacgttgaaagaacgttgtgtgccagcaggGAATCCACGATTaac
ttccaatatgaaaaaCACTGGGTGgataaactcaaacttattttgattaa
ttaaatcgtttgaaattttgatagagTCAAGAAGTTGGGCATGAAAAGAT
GCGAACAACACAATATGAAAGCGAAGTTAAGAAGTTGAGAATCAAAGTTG
AACAGTTGAAGAAAGATTTACTGACGGAACAAGAAAAGGTAAACAATCTC
ACCAAGGAGGAGGAGGGTGTATGATTTCCTTTCCACTCCTTCACTGCGAA
CATGAACAAATTTGAGTGGTTTGATCAGGAAGGAGAGCTAATTTAGGAAT
CTTTGTAGCAAAACAAGTATTTTAATCTCTCAAAAGTTGGGGCCCCCGAG
AGTACAAAATACCGGAAACCGGTAATTATTTAATGAAATATTCTAACTAT
TGCAACAAGTACAGGAATACCGGTTCTTTTCACTATATATCAGATTCTTC
GATTCCGCCcccagtagcgtagccaagagggacgcaaaatttgtgttgga
gagcagatttttattacactgtaaattttctttttatatgtGATATAAAC
TTCGTCACAGAACGATTTCCAATCGAACCAGTTACGAAGAACACAAAGAA
CTTTAGAAGAACAACAACAAATTAATGAAACATTACAAATACAAATTGAT
CAAACATCAACAAGGTATATGATGAAACAGGAGATTCTTTTTATTCAGGC
GACAAGAAGTAGTAAGTCTTGCGCCCGCAGTCGGGGACGTTCCTAActct
cctctttcgatagctattggaaaggcgccactctttctccctagaTTACC
CAAACTTACCCTTGATCCCTCTCTAATATTAACGAGTATCAAGCAGGGAG
GAATCAAGTACAATTTCGGAGTTTTCGGTATGACCCggaaaaatgctttt
ctttacACTGCGAATCGAATTTATCAcgattttttggcgatttttcgCGA
AAGTATGTTTATAAAGATTCTTAACCGAGTaattcaaaaatgaaaccacA
AAGATATGtttgaatgtttgaattcaaaatttcacaataaaatagcctaa
aatttttgaaatatttgaaattcaacattTATAAAACTTCAGAATCGTGA
AATTTACTCTAAATTGTTTAAactatactttaggcgtacacaTTTAcgtg
agcagaaactttcgcgaggacgaaaaatcgcgaaattcacgacatttact
ttcgcgaatttaacgggaAAATATAGCAGAAACTTTTgtgaatcaagacg
taaaatcgggaattttcacatgaaaaaatagcttagagggacaaatactt
cttggattggcttgaaacatttgttctTTGACTAagtagtcttttagcag
gctaagaAGTGCCATAAACGTTAGAAAACTTCAAAGTTTggagttttaca
gattttctatttctactttcgcaaaaaaggccaaaattcgcgaaaatcgc
aaaagtttctgctcgcgaaagtttgtacgcctaataCCTCATGTATATGT
TTAGCCAAAGACATATGAACAGTTCTAAATGTCATTTCTATATGGTTTag
ccatagtataagaaagccgcggctggaatatgtactgcattgtcttttca
gttaattgctgttccatctctgtctctgagctttataagaacatcaagat
gctcagtttattattggtagaaagtttttgaatttttcctctTATTtccc
ttcacaaaaagttttttaattgctaaatatctttgaatctgtacccaata
gaacacttgaactaatttgaacatattttaggggtattttgtggaaaaaa
tagtttttcgccaaaattgaaattataagaaccatattcaagatgacaac
tttcttgtcagtttgaatgataaattttgaaggtgctggcttgaaacttt
cacagtattatcgagatgtaatttttcattgatttctaaaaagactTCAC
TGaaatatagcctggatatccaagctcaaaattttagaaaaaataagttt
tacctcagccagacaaagttctaaaattatagagcttggttcacctagaa
atcaggtgaacccctgttgacagattttcctgcatgaatcccatggctgc
aaataaatatatgcacataatgacatgcataatttcaagatggtacccca
gcagtgataaatcaatttagaatggcagccttgaccataaaatatagaca
gtgtggtggaaagtctgtttagacaaaaagtgcaaagtgaattttggaga
aatttttttttcaaaatccaacccaaaacagcaacaaaaattggcaaaca
gaaaagaagaattgaagcaaaataaagatatacctttttagttctttaca
cgatgcaaccaagtcattaagaagattaaaacaagaatatctaagcaagt
aattCAAAAGAAAgcaaccagaacatctaaaaattcccatgttttgatct
tcccactttttccctaccattattgttatttttatttggatgcgtggtca
aacacccaagggagataattagatattctattgttatttgcttcgaagaa
gaaaagtcagggagatttgcaaagcagcgtatgCGCCTTGCTGATGATCG
CCCGCGCGGTCCACCTAAATATTTAGGCGAACACTTCAAGTCGGCTTGCA
TAATTTCTTACacgcgcgccaccattcagatctctgattcgcttggacca
accaatcagaatatccgcataatcatcctcagatgagaatgcagacgatc
taggtaaaccagaccgtaaacataagaaatatcaaaatcaaaaaaaagtt
tacgggctggatatccaggctaactgaaatattgcgaaggcattcgaggc
actttgtttatttttgagttctttcagcccagccattttgtgctcgttta
aatttcttattgttgatctttcctttacaatgattttataatgcaagtgt
actATCAAGggtatatcattaatgtctaaaacacactgagaagtaagtat
taacgacaaaccaataaaatttaccattaaagatgatACATTACTGATCT
CTTGATCaaaaaatagtcatcaaatacgacagagatagaacaacagaagt
tcagatgttatcattccagccgcggctttcttatactatggtttagCTTA
CATCAACCTGCCTAAACTAAAAATGCTACTTTTATTATTGGATCAAAGTA
ATATTTACCGCATTTCTAAACCaattttcgtttcaaattgttCTATAGAT
TGAAGTATCATCAGCAGCGTGGCTCGTATAAcggatga Coding sequence (CDS) from alignment at sc0000084_pilon:67003..74690+ >XLOC_034784 ID=XLOC_034784|Name=XLOC_034784|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3366bp|location=Sequence derived from alignment at sc0000084_pilon:67003..74690+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATCGTCACCCGAGGTATTAATTCAAGAGCTTGAAGAGACAAGAGA
AAAAGCTTTGCAATTCGAACGCACCGCAAGATGGTGGAATGAGTCGTGCG
Tgaaatggcgcgaaaaatggggtaaagaaaatgcagagaaaaacagactt
atcgaaaaaattgaaaacttaaacgggcgaaacCGTGCTTTGATAGTTGA
GTTTCAACGTGTACAATgcgaaaatgcaaaattaaattcttacATCAGAC
AACAAGAGGGGTTTAAAAAAGACATTGAACAGACTGTCAACCGAGCTTTA
AATATCCCTGAAGATATCAAAGAAGTAGATGAAGAGAGAAGAGTTGCAAG
GGTAGAACCAATTGTGGAGGATATACGTTTAGCAAAAACAATGAGTAATG
CGTCACCGACAACATCGATAAGATCAAGTACGGGGAAACTTTCTTTTAGT
CCACTGAACGAAGTCCAGGATACCTTTGAACAGATTTCAATGTTACCCTC
TGGAGAATCGTTGGACAGTATTGAGAATGTCTCTGAGAAGCGGTTGGATA
GTTTTGAAAACATCTCTGGAAAGCCGTTGGATAGTTTTGACAAAGTTTCT
GGAGAACCTCTAGATAGTTTTGATGATTTAATCGCACCGTGTGCTGCTGA
GAAAAGGTTCTACTCAACAAATGAAAGTTATCCTAGTCTTCAAGATGAAC
TAACTGATTTGAAGAGATTGATTGAGAATTTGGAATCAACAAGCTCAGTA
GATACACAAGAAGAGAAATCATCGATGTTTGGAAATTTATTGGAAAAAGT
TGAAGGTTATTTCATGGAATGTGACAATtatgttcaagaaagtaaaaGAT
GTCATCGTCACCCGAGGTATTAATTCAAGAGCTTGAAGAGACAAGAGAAA
AAGCTTTGCAATTCGAACGCACCGCAAGATGGTGGAATGAGTCGTGCGTg
aaatggcgcgaaaaatggggtaaagaaaatgcagagaaaaacagacttat
cgaaaaaattgaaaacttaaacgggcgaaacCGTGCTTTGATAGTTGAGT
TTCAACGTGTACAATgcgaaaatgcaaaattaaattcttacATCAGACAA
CAAGAGGGGTTTAAAAAAGACATTGAACAGACTGTCAACCGAGCTTTAAA
TATCCCTGAAGATATCAAAGAAGTAGATGAAGAGAGAAGAGTTGCAAGGG
TAGAACCAATTGTGGAGGATATACGTTTAGCAAAAACAATGAGTAATGCG
TCACCGACAACATCGATAAGATCAAGTACGGGGAAACTTTCTTTTAGTCC
ACTGAACGAAGTCCAGGATACCTTTGAACAGATTTCAATGTTACCCTCTG
GAGAATCGTTGGACAGTATTGAGAATGTCTCTGAGAAGCGGTTGGATAGT
TTTGAAAACATCTCTGGAAAGCCGTTGGATAGTTTTGACAAAGTTTCTGG
AGAACCTCTAGATAGTTTTGATGATTTAATCGCACCGTGTGCTGCTGAGA
AAAGGTTCTACTCAACAAATGAAAGTTATCCTAGTCTTCAAGATGAACTA
ACTGATTTGAAGAGATTGATTGAGAATTTGGAATCAACAAGCTCAGTAGA
TACACAAGAAGAGAAATCATCGATGTTTGGAAATTTATTGGAAAAAGTTG
AAGGTTATTTCATGGAATGTGACAATtatgttcaagaaagtaaaaGAGAA
TTGGAGGCAAGTCGTGCTCTCAACGACATTATCAAGCAGACAAACAAGAA
GAAACAAGATCAACCATTCTCAATAAATCATAAAGAAACACAAACTTCTG
GTTTCCAGCTACCAAATCTCTACAGTGGTGCAGCCGATCTATCAGCAGTT
TTATCGTCATTAAGTAGTATAGATTCTACTGGTCGTAACATATCCTTCAA
TAGTGGTCTACCTTCGATCGGTATGATGTCAGTGTTATCTTCATGCACCA
GTATTGAGTCTGGTGATAGATGTACCTCGGTTGATGTTGTGGTCAGGGAT
TTACGTGAAAATAGAATTGGAGGCAAGTCGTGCTCTCAACGACATTATCA
AGCAGACAAACAAGAAGAAACAAGATCAACCATTCTCAATAAATCATAAA
GAAACACAAACTTCTGGTTTCCAGCTACCAAATCTCTACAGTGGTGCAGC
CGATCTATCAGCAGTTTTATCGTCATTAAGTAGTATAGATTCTACTGGTC
GTAACATATCCTTCAATAGTGGTCTACCTTCGATCGGTATGATGTCAGTG
TTATCTTCATGCACCAGTATTGAGTCTGGTGATAGATGTACCTCGGTTGA
TGTTGTGGTCAGGGATTTACGTGAAAATATCCAACGATTACAAGAGGAGA
ATTCGAACGAATGGTCGCTAAGAGAACAAACGGAAAGTGAATTGTGTTCT
ATCAAACGTGAATTGAAACAAGCTGAAGCTACCATTAAGATCCAACGATT
ACAAGAGGAGAATTCGAACGAATGGTCGCTAAGAGAACAAACGGAAAGTG
AATTGTGTTCTATCAAACGTGAATTGAAACAAGCTGAAGCTACCATTAAG
GATTTGCGAGAAGAGGCATGCAAGAAAGAAATTGCAAGGCATGAAATCCA
AAGTTTGAAACTTTTGAACGAAGAGTTGGATAAGAAATCGAAAGAATTGA
TCGAAGTGAAATCAGCACACATCAAACTCAAGAAATCCTTGGAAAATAGA
GATTTGCGAGAAGAGGCATGCAAGAAAGAAATTGCAAGGCATGAAATCCA
AAGTTTGAAACTTTTGAACGAAGAGTTGGATAAGAAATCGAAAGAATTGA
TCGAAGTGAAATCAGCACACATCAAACTCAAGAAATCCTTGGAAAATAGA
agTCAAGAAGTTGGGCATGAAAAGATGCGAACAACACAATATGAAAGCGA
AGTTAAGAAGTTGAGAATCAAAGTTGAACAGTTGAAGAAAGATTTACTGA
CGGAACAAGAAAAGagTCAAGAAGTTGGGCATGAAAAGATGCGAACAACA
CAATATGAAAGCGAAGTTAAGAAGTTGAGAATCAAAGTTGAACAGTTGAA
GAAAGATTTACTGACGGAACAAGAAAAGAACGATTTCCAATCGAACCAGT
TACGAAGAACACAAAGAACTTTAGAAGAACAACAACAAATTAATGAAACA
TTACAAATACAAATTGATCAAACATCAACAAGAACGATTTCCAATCGAAC
CAGTTACGAAGAACACAAAGAACTTTAGAAGAACAACAACAAATTAATGA
AACATTACAAATACAAATTGATCAAACATCAACAAGATTGAAGTATCATC
AGCAGCGTGGCTCGTATAAcggatgaATTGAAGTATCATCAGCAGCGTGG
CTCGTATAAcggatga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:67003..74690 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1645-1683:7650 |
| Aaloc | 1540-1641:4961 |
| Aaloc | 1426-1539:4475 |
| Aaloc | 1276-1425:3619 |
| Aaloc | 1165-1275:2767 |
| Aaloc | 850-1164:1508 |
| Aaloc | 1-846:1 |
|
