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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:76146..81358+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034783 ID=XLOC_034783|Name=XLOC_034783|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5213bp|location=Sequence derived from alignment at sc0000084_pilon:76146..81358+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACGAGGGTGAAGACATACAAGAATATCATAGCGAGACATTGGAAAG
CAAATTTTTTGCTCCCTTTGCAAATATACCTTACGTTTCTAATGTACATT
ACGCTCGGCCTTCCGATGTTTTTATACCGAAaggttattttcaaaacatt
gaagAGATTAAAAACTTCGAATTTTTTGAAGATGATACAGTTATATGTGG
ATTTCTTAAAACAGGTAGCGTTCGtattgaacatttttgtttgtttggat
atgtgtatattttgcattgatatttccatttttttatacATTCTAGACGT
GTGTTTCACCCCTTGACAATATAATCTTCTACCCCTTCTTTACAGTGTTT
TTGTTCGTGAACCGAAGAGTCATTTTTCGCTAATTTCGATCATTTCCGcg
aaaaatagaaatccgatttttggcgaaaatctcaagggaaaatgaaagaa
atcgaaaaaaaaaagatactgATTGAGCGATTTAAACTTTGAAGTCTTAT
TTTGAGAACATTTATCCGCTTAAGGTACTCTGAAGCTGTCGAGATGGGAA
ATTCTGTAATTTCACAGGTTCTCGTACTGAAGTTCACACTGCTGTCGAGC
TGTgtgcaatttggcggaatttattttggcgatttaaaaaaaattctaaa
tttggcgagacataattttggcgaacgacctattttttgttgaatattaa
gcttaaaaaggatgaaaaaaGGGTTTCTagtaaaagaaatttaaatttgg
tgggaattaattttggcgaatggcccATATATCTAAATTTAGCGGGAAGA
AATTtcggcgaatttggcgaatttttgtggcaattcgccaaattcgccaa
aatttcttctcttaaggtaagtTCAGGTTCTCGTTGAAAGAAAGACTTGA
ACTGGAGACTCTCTAAAGAAACGTTAATGTAATGATGTTTTATCGATAAT
TTTTAGGTACGAATTGGTGCGAGAGGATTGTTTGGGCACTCCGTAATGAT
ATAAAATTGAATATTCAACATGCACCCCCTGTATCAGTTTTCGAGTAAGT
Gaattttagagtccgcaaagccttaaaatgttcttaactggttcttaaga
ttttggccatcgaagccttatgttcttatacactTATTTGTTTtcgatgg
tttgagacagattcgaATGTAGCCCAATCGGCGACGTATCGCTACGTCTT
GTCTCTCCGGTGGagaaaataccctacaatttccgCCCTACtggaaagtt
gaattttttattttttttgtttttttttatagtaGGTTTTAAACGGAACA
AATAtataaataccttatcggggaaaaaatgtcagagttttatttagtcg
gggtttttactcgttttttttttcgtcggggggaaatttcgtcacctaga
ggcattttcgtcactttatCACGACCAAATTTCAAATTCCTCTCTTTTCC
CGAATTCCCAAATTTTTGGgcggaaaatcttttttttaaaagacttgACT
GACAACCGACATTGTGTtactattgttattttttatcaaacctttctagt
tttaagggctctgaccatggtcggaaaattgattttagtatttgaacata
aaagttatgttttaggttctttaacacttttaacaaagaattgcctttat
aaattgctttttaatcaaatctcttaagagtaattaagaatttaattaca
aaaatgacgttatgaactttaaaaagacgttaataatatgttgcatcacc
ttcttttataaaaagtgccaagttttaatgggtaattaacctttttgttt
cgaatttttttcaaactgtccgcaaagaattgaactgttttaaatttttc
ggaaaaacttTCTAAATTAACGCATCAAAAGtgatggctgtttttctatg
aaaaattgggatgaaaaattcgtcaaaaagcactattttcaagattttga
agcaaataaacttttagaaaaattttccgaaaaaataaattttagtttga
taaaagatacaccatctaccgcagcaaaattcttttcaaaatgttttttc
tccacagaaactaagctcttcaaagtttgcaaaagtcttcattttcttct
tcaacaaattttttcattgtgattcttaaattttcagactcaatgATAAT
TGGTCTAACAGAagatgtataacatgccacagttttgtgggctacatcaa
gtagaactttacattttgtaagtggcaaatataaaaccgggtaaaagttt
tgggcgggggaaaaaatcaggtaaaagttttggttggggataaaaaaaat
cgggtaaaactTTTGGTCGGGTgttaaaatatcaaagaaaaaattcgtcg
ggggaaaatttcgtcaccccttcaaaattttcgtcactttccccagACAT
TTCtcccccgataaggtacgcAAAGTTCCTAGCCTCCCGCTAAAAACCCT
AGATTATACcaccaggaggaaggaaccaaaaactgagaacaatagaattc
ccaaTCCCTTTTtgtatttcaatagaaatttccATCGCCAGACCGGGGCT
GTGAGCACGGGTGTTTTAAAGTGAAAAGAACAAAATGTTTGAAACAGGTG
CTGCAAAAAccaaatacatgttttttcttttataagcataacgtttataa
gcatacgcagGCTCAGTTTTCGGCACCTAAACAATGGTTCTATtgtttta
gaacaatagaatgctaagcataatgcgagcctgatataggggcagacact
tgcttataaaaaaaaacatgtacacaaATGGTAACGAAAGGATATGTTCT
ACATAGTTGCCATTGTTGCCACTCTCTCATTCGATGTTCAAGGGgtcaag
aattttcttcaaatcagagaaatatttgaattagagagtacTTTCCACCA
GAAGGAACCAATGGTTTAGTTCCGATTACAGAtaaattcgaattaaagag
gttcgaattagaaaaaTATGACAATAGGAAAATATTAGATAGAGAGTTGC
CCTGGTTCGGTAAAATTTTGTAATCTAAACTTTCCAGATGTTTAAAAGTT
TCCCATACATCAATCACTGTCATATCAAAGGATTATCATCTTTCAATATC
ACAGCATTGTTATGGGTATAGGAGATTTCGATAGTGACAACAACAAAGCT
AACGATGAGATTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATGCA
TCTTTCATATGAATTATTACCAAGACAGTTTCAACAAAAGCAACCTAAGG
TATTTATACTCTTTCTCACCTACAAACATCAATAGAATCTGATAGAGCGA
TTTGTAAATAAGGCTAAAATAAGATgatgttggaaattttcatACTTGAC
AAAATATAGCAAACAAAATAGATCAACAGACGATAATTGgcttcacatga
aaactcagattacCCCGGAGAATTTCTCAACGATGCTTTGTGTGGaaaaa
aattcaccgtgaacttttttccgcgcaaagcattgtgagTAATtttcggg
ggtcaaatctgagttacTTTCAccttaagccgatatcgtctacaTTACAT
ACTAGGCCAGTCAATCCCAAGGTGCATCACGTTTCGTAGTACTCTACGGA
AATCAAGAATTTCCGTAGAGAACGGGacttaccgtgaaaagcacaggccg
atatcatatattgacctgtgcTGACCAATCGAGATTCAGCACGCAATcaa
aatgaatctatgttttcattttcatttctgtcatttgttttccttttttc
tgctgAGCCAGCTTTTCCCATAAATTATGCTCGCGcatcgaaaatatcaa
aatgcgcgcgaaagtactgctaagtaatacgccgaaaacTGGtaaatcag
gccgaacctgcattgcagggaaaaactTCCCTGCAGgtgagttacctgcg
ccaagcgttaaacaagcagcaaaaatatcataaactaaactgtgaacaaa
gtttaacgcttggattcccagggtaacttaacctctgataatCAGGTAAA
AAGGGACTGTTTACATACAAGTCTACAGAAAGCCAAATATTTGACGCAAA
TCATCggcaaacatttttttatatcacAATAGATGATTTACATGCTTCGA
AACCCAAGAGATGTTTGCCAGTCCCTTCACGGTCACTTCTATACACTCTA
CGATGACTTTTCTGGATCTTTACAAGATGTTGTTAATCTCATGACCGATG
ATGCTGGATGTTATTCTGGTCCGTTTTTTAGACACGTTTTGGGATACTGG
AAGCGACGCTCTTATGAAAATATACTCATCATCTTTTacgaagaaatgaa
aaaagatttatcagGTCATATCAAGAAGATTGCTGATTTCTTAGACATTA
AAATTTCAGATGAGGAAGTATCAAATCTGGCCAAACATTTTTCCTTTGAT
TCGATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGCAGGT
CAGTGTGGaacgattttttcaaaatctttgctcAAATTTCAGATGGAAAA
ACAATTTAGCACAATCAAATCCTACTTACAATCATAAGCCATATAATAAG
GCGAAGTAGTGGAGTTGATATCCACTCTCTTTTTCATGCCGAAGGTCAGT
TTTCGATTCCCATTCGGTGCAATAAATGGTTTGACCAGTGAATCCTATTT
ATACCGACATTTTTCCAGTTTCATAATACCAGGGGGTATTTTACAGCACC
atgaataacttttgatctagttgaaATTTTTACACTAAATTTGGAACAGA
TGTTGCTTATCATGGaaagatttaaaagattttgttaagTCAGAAAGTTT
TGTGTGCTTTGAAAAATGTGAAGTAGTGCATGGGTGGTGTAAAATACACC
TTGGTAGAAATAGGGTTTTATCCAGGTTAATACGTCATGTGTCAATGTGA
GGAGAAATAGGTATTACAACTCGGATACCGAAGAAGGGAGGAGACCTTTG
TGGTATTGCATCGATATTTGTCAGGTTCACCTTTGTACTATaacactttg
taataaaaataaacgcattttgtttcaaattgaACAACTTTTCAGGAAGG
TCATAGTTCAACAGTCGAAGCAGCTCACAAGGGAAAGACAATGTTTAACA
AGGGACAAGCTGGATCGTGGAAGGCTTTGTTTACACCAGAGATGACAAAA
CAAATGGAAGAATGGGAATCAAAATGGTTGAGAGATACTGATCTTGAACT
TATTTATGAATAG Coding sequence (CDS) from alignment at sc0000084_pilon:76146..81358+ >XLOC_034783 ID=XLOC_034783|Name=XLOC_034783|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1962bp|location=Sequence derived from alignment at sc0000084_pilon:76146..81358+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACGAGGGTGAAGACATACAAGAATATCATAGCGAGACATTGGAAAG
CAAATTTTTTGCTCCCTTTGCAAATATACCTTACGTTTCTAATGTACATT
ACGCTCGGCCTTCCGATGTTTTTATACCGAAaggttattttcaaaacatt
gaagAGATTAAAAACTTCGAATTTTTTGAAGATGATACAGTTATATGTGG
ATTTCTTAAAACAGATGGACGAGGGTGAAGACATACAAGAATATCATAGC
GAGACATTGGAAAGCAAATTTTTTGCTCCCTTTGCAAATATACCTTACGT
TTCTAATGTACATTACGCTCGGCCTTCCGATGTTTTTATACCGAAaggtt
attttcaaaacattgaagAGATTAAAAACTTCGAATTTTTTGAAGATGAT
ACAGTTATATGTGGATTTCTTAAAACAGGTACGAATTGGTGCGAGAGGAT
TGTTTGGGCACTCCGTAATGATATAAAATTGAATATTCAACATGCACCCC
CTGTATCAGTTTTCGAGTACGAATTGGTGCGAGAGGATTGTTTGGGCACT
CCGTAATGATATAAAATTGAATATTCAACATGCACCCCCTGTATCAGTTT
TCGACATTGTTATGGGTATAGGAGATTTCGATAGTGACAACAACAAAGCT
AACGATGAGATTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATGCA
TCTTTCATATGAATTATTACCAAGACAGTTTCAACAAAAGCAACCTAAGC
ATTGTTATGGGTATAGGAGATTTCGATAGTGACAACAACAAAGCTAACGA
TGAGATTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATGCATCTTT
CATATGAATTATTACCAAGACAGTTTCAACAAAAGCAACCTAAGATGATT
TACATGCTTCGAAACCCAAGAGATGTTTGCCAGTCCCTTCACGGTCACTT
CTATACACTCTACGATGACTTTTCTGGATCTTTACAAGATGTTGTTAATC
TCATGACCGATGATGCTGGATGTTATTCTGGTCCGTTTTTTAGACACGTT
TTGGGATACTGGAAGCGACGCTCTTATGAAAATATACTCATCATCTTTTa
cgaagaaatgaaaaaagatttatcagGTCATATCAAGAAGATTGCTGATT
TCTTAGACATTAAAATTTCAGATGAGGAAGTATCAAATCTGGCCAAACAT
TTTTCCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCA
TGCAAAGCAGATGATTTACATGCTTCGAAACCCAAGAGATGTTTGCCAGT
CCCTTCACGGTCACTTCTATACACTCTACGATGACTTTTCTGGATCTTTA
CAAGATGTTGTTAATCTCATGACCGATGATGCTGGATGTTATTCTGGTCC
GTTTTTTAGACACGTTTTGGGATACTGGAAGCGACGCTCTTATGAAAATA
TACTCATCATCTTTTacgaagaaatgaaaaaagatttatcagGTCATATC
AAGAAGATTGCTGATTTCTTAGACATTAAAATTTCAGATGAGGAAGTATC
AAATCTGGCCAAACATTTTTCCTTTGATTCGATGAAACGAAAAGCAGAGC
AAATGATTCCCTTCCATGCAAAGCAGGAAGGTCATAGTTCAACAGTCGAA
GCAGCTCACAAGGGAAAGACAATGTTTAACAAGGGACAAGCTGGATCGTG
GAAGGCTTTGTTTACACCAGAGATGACAAAACAAATGGAAGAATGGGAAT
CAAAATGGTTGAGAGATACTGATCTTGAACTTATTTATGAATAGGAAGGT
CATAGTTCAACAGTCGAAGCAGCTCACAAGGGAAAGACAATGTTTAACAA
GGGACAAGCTGGATCGTGGAAGGCTTTGTTTACACCAGAGATGACAAAAC
AAATGGAAGAATGGGAATCAAAATGGTTGAGAGATACTGATCTTGAACTT
ATTTATGAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:76146..81358 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 814-981:5046 |
| Aaloc | 448-813:4083 |
| Aaloc | 304-447:3106 |
| Aaloc | 217-300:959 |
| Aaloc | 1-213:1 |
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