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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:205426..209064+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034781 ID=XLOC_034781|Name=XLOC_034781|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3639bp|location=Sequence derived from alignment at sc0000084_pilon:205426..209064+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATGTATAAATCGCACTCTGCTTGCATGCAGATTTTGCACTCAATT
GAGGAAACCAACCGTGCTCCCCAGTTCTTGTATTGCTATTCAAAGGTATC
TGACAACATCAAAAATTCAGTTTgatcaacaccaaatttctgAGAATGTT
AAACCAGAGGCTGGAGCTCTATCGACTggtcaaaaaggtaaaaataacAC
TCTTTGCTGCTCTTTGATGGTAAACTTATAGTCTGTGATTTTGCTAACAT
CTTGGGCCTACCGCGAagataaattaacccatgttcatTTGTTCGTCcct
ctgtctgtctgtctgttacCACCTTTGgtcaagattggctcattagtttt
ttttaatttttggtacaGTAGGTGTAAAATTGCAAtgttcagccaaaaca
ttcATAACTGCGTTGCTTTTTGCTTTAAACCATTCAAAAGCGAAAGCGAT
TGGGTTCTAATGCTCATGTATTGTTTATCGATTTGATTGACTATTGATTT
TGGTGCAATTAATTTAATCCAGTCAATCAGTACCCAAATcaagatgaaaa
agatcaaaggaTCAAAGTGGTGTGCAACCttggcagattttttttcacag
cAATAGCCTTTAGAGTGAATATGTGCCATGTGCGGTTGTCGGAATCTTCT
TGGAGATTAACAAAAATAGgtctcaaattttctttcttttcatgaCCTGT
ACTCAATAAAGAAATTGTTGGTCAGGATCTTTCATAAATTAAATCAATTT
GGAcgctaaagaaaattttaattgataGACTTTATAATTATACAATGAGA
CCAACCTATCTCTTATTTTTAGTGAAACAGGCTGGGAAAGATGCAAGTTA
TATGGGAATCATGCTACTTGGCTTTGGTGTGACTGGTTGgtatattttaa
ttttcaccAGAAGAATGACCCAAATAGTATGATCCTCTTTTTTAAGGGAC
TGTTAGAGCCATTGTTATATCACAAAATGGTAGGGGGGAGGTAGTAAAGG
GAGGGGTAAATTATCCAGGGGACAAAACTGTCCGGAAGTGGATTGTCCTG
CAAATGAATTCTCAACTGAAACTGTCATTGCATTATGATCTTAATGTTTC
TTGTTAATTTATGGAGCTTTTAGTTTAATATTAGAACATTTTCTTAGgga
gaaagttttgaattttaattttgaaaatccaaCGAAATTCAGAAAAAAGG
ATTCAAAAGATTGTAAAGATCTCCAATTTTAGTgttctaaaaataatttt
tcaatattttgtctCATGATAGTTTGATATTTTAGTACTGATATCCAGCC
CTGATTTATGTGGTTGTGTTGTAGAAAAATCACATAGATCCTaaattttg
tcttctttttgatttttaaccttttttatgtgatgatttgataactgttt
catttttCTAGGTACTTTGATATGGTATGTGGTAGACGAATTGATGTTTG
GCTTCAGTGCAAATTCAGTATACTCCAAAGCATTGAAATTAGTTAAAGAT
GATGATAGAGTAAGGTTTAAGTTTCTACTTCTCGGGCAAGGTCCTGGCTT
TTAAATAATGACATTGGAAAACAAAGAATGCAGCTAATTTGttgtttaaa
aatctgaaatttagAATTAAACTTTATTTATTAGATTTATACTCTACTTT
CGATTTTCCGAACAAAATTTGGTCGATATTTCTTGGTACTTCTTTTACAT
AGATACAATATGAAATAGGTGATAATCTCAAAGGCTATGGAGAAGAAACT
TCTCGAGGAAGACGCCGTCATGTAACGTAAGTATCTATTATACTCGTTGG
ACTCTGAGAGGAAGAATGATCTTGTTTTATAAAAGTAAGCGATTAAAATC
AAAAGTCCAAAAAGAATTGTACAAGCGTACTACCTTTAATAAAAGCccaa
acgttgtttaattttttagttttttggagGGCATTTAATTTAGAATACAA
AATATGCCACTTTAGAGTTGTTGAAATAGGGGTCAAGATAAGTTATCTTA
ATTACAATTAACACATATCTAAGTTTTTTCTCCACAGGATTCTTTTACAG
CTACTTGTTTTGAATGGAAAAATTTTCCTTCGAGGGGAGGGcgtttattg
tttcaaaaaatcaattttaggaAACGTTCTAGAGGGTCACCATTTTTCTG
TATTTAGAGCATAATTTAAAGTTAGAATAAGACCATGGGTTTTAATTTCG
TAATcccaaaaaatatacaaatttgaCACTTTCAATTATCTTTTTGGTCT
TATTATAGTTCTCAAGAGTTTGTGGTGGATGGTGTGAACCATATGCGTGT
GAGATTTTATTTATCTGGTTCCAATCGAAAAGCAACAGTTCATTGTGAAG
CTGTGGAGGTACGTTTGTTTAGATTTACCTTCTGGGTTTAGTGAAAAAAG
GTTCAAACATTTCAGCACACCTTGACGGGTTTTGTAGATTTgaataactt
gaaaattttccacccaggacattcttattccaacaccctccccccgctta
ttaatttttgagaacaTGTCTTTgtaagttccctcttttgtcctaattcc
gCTGTTTTGGGACAaggtggagtttttacaagctcttatttaatttggtt
ggtcgttaagatgtaataaaagaatcttattactttttctaaagaacgcg
tcatctctatcactttaaatgaccaattagtgaagtatcttgtaaaaact
ccaaggcatctcgctgttttagcctccttttcaaaaattttccgcccagg
acatttttatttcaaccccCTTATTAAGCTTATAAGcttataaagttttg
atattttttccagCTCCCCCTCTCCCACGGCTAACTCCAACCTccttaga
ctagtaaactagtcgttgaaaacagacccatatacaaaaaatcaagctcc
aaataaaaagaatcgaagggatgaagttgcgtctcttttctgaatttcaa
cgactagaagctacttccctcaaaaaacgttgtttaattttacaactttt
tttaagtttttgagaatccatccaacttttttgactaaatgatattacat
agtaacattgaacatgggaacatataaataaacgAGCATTTCTAAAatcg
caataaacagaaagaaaaataaatgcaatcccgcatgggtcagacataca
gaaatctgtatgtctctccttacgattttaggtgaagaaaaaaaggcgtt
ggaagtagcttctagtcggttattttccttttctctcacgcgcgctgaat
atttaattagtgtttacattatttgattgacagttttattataagtaata
accgactagtttactagtctacaaCCTCCTCAgctattagatacccgaga
gtaggtgactttattgaaagaaaatggCTAGCCTATAgatatttttttgc
ctgcgtGTTCAAGAAATTTGTGacgaatgaaaaaaatgatggcGTTGAAA
ACCTACCTTTAATTAGCTTCAGCACGGAACCAACTATTTTTGGGAGGATG
GAAAGGTTCGCCAGAAGaactttgaattttcttttcttttctatagACAT
CAAGAGGCAAATTCGATTTCCGTTATATCTTCGTGGAGATGCAAGGCTTT
CCTCCCAGTGAACCAGTCATTGTGGTTGATAAcagataa Coding sequence (CDS) from alignment at sc0000084_pilon:205426..209064+ >XLOC_034781 ID=XLOC_034781|Name=XLOC_034781|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1230bp|location=Sequence derived from alignment at sc0000084_pilon:205426..209064+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATGTATAAATCGCACTCTGCTTGCATGCAGATTTTGCACTCAATT
GAGGAAACCAACCGTGCTCCCCAGTTCTTGTATTGCTATTCAAAGGTATC
TGACAACATCAAAAATTCAGTTTgatcaacaccaaatttctgAGAATGTT
AAACCAGAGGCTGGAGCTCTATCGACTggtcaaaaagATGACATGTATAA
ATCGCACTCTGCTTGCATGCAGATTTTGCACTCAATTGAGGAAACCAACC
GTGCTCCCCAGTTCTTGTATTGCTATTCAAAGGTATCTGACAACATCAAA
AATTCAGTTTgatcaacaccaaatttctgAGAATGTTAAACCAGAGGCTG
GAGCTCTATCGACTggtcaaaaagTGAAACAGGCTGGGAAAGATGCAAGT
TATATGGGAATCATGCTACTTGGCTTTGGTGTGACTGTGAAACAGGCTGG
GAAAGATGCAAGTTATATGGGAATCATGCTACTTGGCTTTGGTGTGACTG
GTACTTTGATATGGTATGTGGTAGACGAATTGATGTTTGGCTTCAGTGCA
AATTCAGTATACTCCAAAGCATTGAAATTAGTTAAAGATGATGATAGAGT
ACTTTGATATGGTATGTGGTAGACGAATTGATGTTTGGCTTCAGTGCAAA
TTCAGTATACTCCAAAGCATTGAAATTAGTTAAAGATGATGATAGAATAC
AATATGAAATAGGTGATAATCTCAAAGGCTATGGAGAAGAAACTTCTCGA
GGAAGACGCCGTCATGTAACATACAATATGAAATAGGTGATAATCTCAAA
GGCTATGGAGAAGAAACTTCTCGAGGAAGACGCCGTCATGTAACTTCTCA
AGAGTTTGTGGTGGATGGTGTGAACCATATGCGTGTGAGATTTTATTTAT
CTGGTTCCAATCGAAAAGCAACAGTTCATTGTGAAGCTGTGGAGTTCTCA
AGAGTTTGTGGTGGATGGTGTGAACCATATGCGTGTGAGATTTTATTTAT
CTGGTTCCAATCGAAAAGCAACAGTTCATTGTGAAGCTGTGGAGACATCA
AGAGGCAAATTCGATTTCCGTTATATCTTCGTGGAGATGCAAGGCTTTCC
TCCCAGTGAACCAGTCATTGTGGTTGATAAcagataaACATCAAGAGGCA
AATTCGATTTCCGTTATATCTTCGTGGAGATGCAAGGCTTTCCTCCCAGT
GAACCAGTCATTGTGGTTGATAAcagataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:205426..209064 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 523-615:3547 |
| Aaloc | 424-522:2260 |
| Aaloc | 349-420:1703 |
| Aaloc | 253-348:1414 |
| Aaloc | 190-249:825 |
| Aaloc | 1-186:1 |
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