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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:212517..216535+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034780 ID=XLOC_034780|Name=XLOC_034780|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4019bp|location=Sequence derived from alignment at sc0000084_pilon:212517..216535+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAATCAgtcaaataatgatgaaatGGCAAATAACTTTTCTGTTATCATT
CCTATCTGTGTTCATTGGAAACACTATTCAATATGAAGGTAAcggaaatt
tcattttcaaacctACCCGGAGGTCCTATGAGTACAGTCAAGTCTAATCT
CATCTCCATAAACCGAATGTCTTCAACAATCTTCTTGAGGCTTTTTGTCT
CTCCATGACTCGAACAATCACTTCCCTTGACTGGTATTTTATAGCTTTTG
TATTTTCTGAAGATTTTAATGAGTTATCATCATCGATAATTTTTAAtgac
attgggctcttccagaaaatttttgtacgtgggggggggatggaggatat
attggatattttggatattttgtccggggcaaaatttgatttgtttttgg
gACAAACTTTctctgtttaggggtaattttgaatgtccaggggatcaact
gatgcttgtccgggggtgaaatctgttgtccggggggtcaaaacTCACAA
TGTCCGGGGAACAAATTTCCACAAAGTGTTATATTCTCCACCatccccct
ccccctcccccatattcaatttttttctgaaacagcCCATTTCCAGGAGG
GTGCATTGTAAATCCAAGTCGGCAATGTCCCAAAATAACAAATTCCTTGA
TCTTCTATTTCTTTCTCGAACGTTTTTAATTAAATGTTAACCGAAAGGAT
TTTCTGATTTAATAGAACAAACTACAATCATTGACAAAACCTATGGCACA
AAGCCCAAAAATTAGTTAGCTCCCTCTCTCCCCCAAACAATGTTGTCGAA
GGGGGCTAAAGACCGGCAAAAGAATATTTCTTTCCCAGCAGCATTTTTCG
GAGGGGAGAGGGAGGTTATTGCCCTGTGTCTAAATTTGACCGCTGGAAAT
GTGCAATAATATATTGGCAACAATTGTAGATGTTCGCActgttttttctc
atttctctAGGGGGAATGATCTTATATACCAATGCTGGAAGATGCCTTTG
TCAAAAAAGGGATTACTGTGAAAACGGCCGTATGAACTTTGATGAAAGTG
ACGGTAAACCTGTTGAGCATTGTTGCCATTGGGGTAATCTGGTGTCTTTG
GATTGCAACAAACACTTGAACTTCGTTTCAAATGGAGAACCCGTTTATGA
GACACATAGTGAGttgaattaaaaaattctttgttatttCTTCGCAACAG
GAATCAtgtgatttatttttcaactaatAAGTGATTTAATtcaaaacacc
cccttctcacagatccactgggaCCTCTTCCCACTGGTAaagttggccaa
aatatcgtccccggtggaaaatattactccaatttttgtccccaccgaaa
ataatcgaataaaccaatcctcactgcaaactattatgctatttttccca
tcatctttgaattttctgacttgaaaacaaaagaatttaaatcccctgcc
ataaaaaatatgtgaatatcaatcccaatcgagtttcaagacgatatttt
tttattcctACTGGCTGAAAAAGTCCTATCAGGTCaatgagaaaggggtg
ttttaGAATAAGAAgattttattatcaaaacacACACGGCATAATTGAAT
TCAAAACTCTTTTCAAACGAACTTCTTTGGACAACCACAtgtccgccaaa
atttctttctttaaggtACTGTATTCGATGATGCCGTAAAGATTCACTTT
TCATATGGACTACTTCATAATGgaatcttttcaacaaaaagtgaTTTAAG
ACaaaaaaaaGCGAACTTAGTGCTTTATTAGAAGTCGAattttagattaa
aatataatcCATTCATTCTTCTGATGTGATGTTTTGTAGTACCAGAACCC
AAAGGACGAAGCCTTGTCATATACAAAAGTACAAGTGATGTCAGAACCAA
CGATAAGAATAGAAAACTCTTCTTGAATGAGACTGGAGGATTAACAGCGG
ATTCCGGCATTTACTTCAATTATAATGGACCATCAGGAGATCGAATTCGT
GTTCATTTTTGTCAAAGTAAGTTAATTCTCACAACAGGTGTTTTAGCCTG
GGGTTCACTTACGCgcggttttcacacaaacgtctgattgaaagtaaaag
tgaaatatttcgaaaaatatgccgcttaaaaaacaaagaaaaggctagat
tcaatccgtcgttcTAAATGCAGCGCAAATCTTAaggattcactttttct
tgtttgagaaaggttgaagattcctttcTAAGCGCCTTCGGGGCTCTAAA
CTGAATGGTCTATACAGGTTTTCAGATTTGGCTACATTGTATGATTTTAC
AGTTGAGTACATAAGGAAAAGAAACAGAGTCCCTCGTTACTCTATCCCGG
CTCTACCGACTTACTTTCTAATTTACAGCTACTATCTCTGTATACACGAT
GAAAATAACATCCCCGGACAATTTTATGATGACTTTCGATTTCGATCGAC
TCGGACGGTTTACATTCGATGCTGCAGCCTTTCCGGCGTAAGTATCGGAT
TGATGAAAGAAACTAGTTTGGTTTAAATCAGCCATTCCATAAAGTATTTA
TTTTCagcagaaaataaaaataaaaataaaacttgttgtTTTTTACTTAT
TATGATCAAAGAAACGATtcggaagcgctctaaattagctTGGAAGGGTA
AAGTTTTAACTCTAAGATTCAACACTAGACTtagggctctgaccataatg
aattttttatattttccatcTATAAAATATAGTTTTCTgcctgatgtaac
caacaaaatcatggcatgttatacattttctgttacgCCAACTAGTcgta
aatctaaaaatttgaaaatcataatgaaaaaaaaaattgacgaagaagaa
aatgaagagatTTTCGGAAAtgttttgtaaaagcttctttgtctcaaaat
cttgaaaatagtggtttttaaCCAATTTTACATCccaattttttgtagaa
aacaaCCATAATTTTCGATACATTAGGTTAGAAAATTTCTTCCGAAAATT
TCTTTGcggatatttaaaaaaagtttgaaacaaaaaggttaattacccat
taaaacttagcactttttgatgaagagggtaatataacattttattttaa
cgtatttttaaagttcataacgtcattttgtAACTaatttcttaattact
cttCAGGGATAAAATTACCAAACAACTTGTAAAGTCAGTTTTTCGTTGAA
AGTGTCAAGGaacccaaaacaaaagttttatcttaaAATCCCTTATCAAA
TTTCTGACTATGATCAGAGTccttaagacttacgaccttatGATCTGAGG
TTCCAAAAGTTAAAGAATGGTCctatagggctcagaatataacctggaag
tctataaacccctcccgaattgaaatactcggataaatttatcaattagc
ccaaaagggATTTTCTCGCCCGatctccaaatttcgaaaaacgaggaaat
aagctaaattctcaatagattttgaccatgattatacaatggcttctttg
agGGTActactttaaagaaaaactccgatcaaatatGGTCAATAAAGCTT
GGTCCAGAGTTTGTAACGGTCAGTTGTTCCATACTATTCTTCCGTCCATA
GGCTTTACGAGTGAGTTTATGTTTTCGAGATAAAAAGGTATAAAGCCCAG
ACCACTTTGCTTGACGACATTAAAAAtgccaaaataccgtcgtctgttta
ggtaagCAAAGAGTGCGTAGCGTCGTatataaacataaaaatgttTATGG
GTAAAAGGTCGGGGTTAAGTTTAATAATGTCCTTTAAAGTCataactttt
ccaaaaaaaaagctTCAGAAATAAAAGTTATTTGGACTATATTACTAGAA
AGAGATTTAATCACAAATTGATAATGTTATAATTTTCCCTAAAATTTCAG
ACAACTCCAACTACCCCTCACTCACCTTTATTACCTATCGACTTATTTCT
AGACCGAAGGAAGCCGTGTATGTACGAGAATTGAACCCAAACGTCAATCT
TACATCAAATGAAATGGCT Coding sequence (CDS) from alignment at sc0000084_pilon:212517..216535+ >XLOC_034780 ID=XLOC_034780|Name=XLOC_034780|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1278bp|location=Sequence derived from alignment at sc0000084_pilon:212517..216535+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAATCAgtcaaataatgatgaaatGGCAAATAACTTTTCTGTTATCATT
CCTATCTGTGTTCATTGGAAACACTATTCAATATGAAGCAAATCAgtcaa
ataatgatgaaatGGCAAATAACTTTTCTGTTATCATTCCTATCTGTGTT
CATTGGAAACACTATTCAATATGAAGGGGGAATGATCTTATATACCAATG
CTGGAAGATGCCTTTGTCAAAAAAGGGATTACTGTGAAAACGGCCGTATG
AACTTTGATGAAAGTGACGGTAAACCTGTTGAGCATTGTTGCCATTGGGG
TAATCTGGTGTCTTTGGATTGCAACAAACACTTGAACTTCGTTTCAAATG
GAGAACCCGTTTATGAGACACATAGGGGAATGATCTTATATACCAATGCT
GGAAGATGCCTTTGTCAAAAAAGGGATTACTGTGAAAACGGCCGTATGAA
CTTTGATGAAAGTGACGGTAAACCTGTTGAGCATTGTTGCCATTGGGGTA
ATCTGGTGTCTTTGGATTGCAACAAACACTTGAACTTCGTTTCAAATGGA
GAACCCGTTTATGAGACACATATACCAGAACCCAAAGGACGAAGCCTTGT
CATATACAAAAGTACAAGTGATGTCAGAACCAACGATAAGAATAGAAAAC
TCTTCTTGAATGAGACTGGAGGATTAACAGCGGATTCCGGCATTTACTTC
AATTATAATGGACCATCAGGAGATCGAATTCGTGTTCATTTTTGTCAAAT
ACCAGAACCCAAAGGACGAAGCCTTGTCATATACAAAAGTACAAGTGATG
TCAGAACCAACGATAAGAATAGAAAACTCTTCTTGAATGAGACTGGAGGA
TTAACAGCGGATTCCGGCATTTACTTCAATTATAATGGACCATCAGGAGA
TCGAATTCGTGTTCATTTTTGTCAAACTACTATCTCTGTATACACGATGA
AAATAACATCCCCGGACAATTTTATGATGACTTTCGATTTCGATCGACTC
GGACGGTTTACATTCGATGCTGCAGCCTTTCCGGCCTACTATCTCTGTAT
ACACGATGAAAATAACATCCCCGGACAATTTTATGATGACTTTCGATTTC
GATCGACTCGGACGGTTTACATTCGATGCTGCAGCCTTTCCGGCACCGAA
GGAAGCCGTGTATGTACGAGAATTGAACCCAAACGTCAATCTTACATCAA
ATGAAATGGCTACCGAAGGAAGCCGTGTATGTACGAGAATTGAACCCAAA
CGTCAATCTTACATCAAATGAAATGGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:212517..216535 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 574-639:3954 |
| Aaloc | 466-570:2381 |
| Aaloc | 289-462:1842 |
| Aaloc | 91-285:963 |
| Aaloc | 1-87:1 |
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