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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:668773..672858+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034755 ID=XLOC_034755|Name=XLOC_034755|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4086bp|location=Sequence derived from alignment at sc0000092_pilon:668773..672858+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACACCAGTTAGCAATGGACAAACCACTAACCCTGCTGTTGCCAA
CCTcccaaacaaaagaatttctgatAACGTCATTCAAAAATACCTTTACG
GCTACAAAGAAATGAGGCTTGTTTCGTCGGAAGAAGTTTTATCCACTCTA
TTGAAAGGTAAGTTCTAGTTTCTGCCCTGTCTATTTTGTTGGTTAAAGTA
GGCTAAAAGTGGGCAGAACGTTGGGAATTacaatctttgcttgaaaaagg
ttgaaagaagtcattgtttTGAGGTCAAATAAAGAGAgtaatgcattgac
tttagacagccaacgtTCTGCCAACTTTCTGCCAACTTTAACTAACATTT
AGAATacgcagggcgaaaagtggacCGTCTTAACCAGAGCTAAACGGTTT
AGACGGACAACTTCTCGCCCACTTTTTACCTACCGTcctgcttcttaaaa
gaagcAGGTCAGAAAGACTCTAGTTTAGACAATCCTGTCCCACAGCCACG
TCGGAACTTTTTTCCACAGCGGGATGAAAATTTCGTGATTTATTGTTttc
aggttaaaaaatccagtgctGTGGGGATTGCTTTTAGAGCACAATCTTTT
CAATTGAATATCTAAtggggatgaaaacaaagtctttaCAATCTGGGCTG
AAATCGTAGGGTATTATTCACATTGCGTTATTCCCACGAAAATTTGGCCA
AACTTTTCAGTGGGGTGGGGGTTCCACCGGacgacacaggggtgtaatca
tattttttagttttacacatcctttttattttcatcatgaGAGGTCCTGT
CGCAGCTCCTCAAGAATTGAATCCTTTTTGAATGTCTTAACGTCTAATTC
GATCATAGGTCATAGAATTACTCCCTGTTATTCATCtcatacagtcaact
ctctaattcgaacctctattattcgaatttttctgtaaaatagtggtccc
ctcagctagaaagTAGTATAAATTACTCTTTGTAATTCGAAAAGAAACTT
CCtggccccttgaagatcgaattagagagagttaactgtaGAGTATCCTT
GATGGAAAAAGTATATGCTCGACTTTgaaaactttcattttacagGTCAA
ATACGAAAGTGCACCAGCCTACCGGAAACACCACCTCTATCACCACGTAA
AATCAGAACACCTGATGAAATATCATTATGTTCGTCAAGTCTACCCGGAT
CGAAATTTGGAGCATGCGCAATAAAGAGGATTCAACAAGGCACTTGGTTT
GGTCCTTTCGAAGGGAAGTTAGTGAGGACGACCGAGATTTCATCCAGTAT
GAACACAGACCACATGTGGGAGGTATGTTTAGCAAGActaatttgattag
ttgttttacgggcccgaccgaccttgaaattacaaaaatcgaaaaaaaac
tcatttttgtagtatatttttattttcattgctttacagactgccaaatt
ttcaaaattttggttgtttttccaaggttttgagaatttattattcatga
tttgaccttttgtgtctttttattttctatttcgcattttcgtcaagatg
tagtagtttttactacctttttagaagattttatagttgaaattctactt
ttatttttattttttcgccgatcGGCCGACCCTcatttttgggtagcttg
gcccgtaaaacaacaaattaaattggcctcgcctttTAAAATTGGAATCT
CCAAAACTCGAACATGCACGGGGAAcaatttgttcgatttaaggaaattt
caagttatagagtaaggtttaCAAGGCACTGTTAACTGAAGGTcgataaa
acttgttcgagttaaggaaacaaTCCAGTTATAGAGGTTGAGGAAATTTT
TGAAGTAATTTGAGGAAAGATTGAATTAAATTCATCTCGGTTCTTTACAT
CCTAATGCGGCTTCGGTTAGATAATGTAGTTACAACAAATACTGTTAATA
ATAATTAGGTTAGGCCTTAAAAGCCGGTATATGGTTTATATTATTGATAC
ACCTGTTAGACTCAGTGGACAGGTAGGtttttttGTGCTGGCATTTATTA
TTTATCCTGAAAATAAGACCAAGTCGCGAAAAAGCGGCTttgtcattcat
tcattcattcattcattcattcattcattcattcattcattcattcattc
attcattcattcattcattcattcattcattcattcattcattcattcat
tcattcattcattcattcattcattcattcattcattcattcattcattc
attcattcattcattcatcattcattcattcattcattcattcattcatt
cattcattcattcattcattcattcattcattcattcattcattcattca
ttcattcattcattcattcatactCTTTTTACTCTTTTATCACCACAGAT
CTTTCACGACGGAGAAGTCAGTCATTTCCTTGACGGTTTTAACGAAAATA
ACTGGATGGCTTTCGTCCGCTGCGCTCGCCATAAGAAAGAACAAAATCTG
GTCGTTTTTCAATATCACGGTTGTATTTATTATCGTTCAACGAAAGATAT
TTTGCCAGGAAATGAGCTCTTGGTTTGGTATGATACAAAATATACACAGC
TTCTTGGTATACCATTGACTTGGAATGATAACAGAGGTTTGCATACTACA
CCTCTGTTTGCTCTGTGTCCCAGTGGAATTTTTTCCCTCAGTGgagatca
aaatttctatcgaaatcctcATTGGGATGTatattctattgtttcaagct
CCAAAAAGGGCATCATATtaaggatggttttggagtgtaaaTTTTTCCAT
TCGATTTCTATAAAAGAATGAAATTACAGGGTATACCTCCTGAAGTGAGT
TAAAAATTCAGCGTACTTTTTTCACCAAGGGAGATTTTTTGGCTGAGCTT
TCAATCtccactgggtctgtgacaaGGTGCGGTTTTATGTAATTTCCGAG
AAGAGTCTGATTACTCTGCGTTGGCACGTAAACACTATAAAGGCCATGGC
TCTTTAACAGAATCTGCCCTGTTTGGATCACCGCTATGATCTTTTTCTTC
CAGATTTggaatgaatattaaatgagcttttcagTACAATGAttaagcga
ccgtagtacagtggtagagcatccggctacggttcgcaaggttgtgggtt
caacccccagccgggttataccaaagattcccaaaatggtacttgattcC
TCTCTGCTCAgtaactaagagaaggatcaagggtaagtggagaaatccag
ggagaaagagtggcgccctcccctaccttcgggtagatagctatcgaaag
aggagccttcgggtcgcctccgactgcggtcgcagacttacttacaaTGA
TTTGCTTAAAACTAAAACAATCACACCAAAATAAACGTCAATATCAAACA
TAAACATAAGAGGCATTTTAAAAACCACAAGGTTAGTTTGAACAACCAGG
CCATGCTTGTGTTATAAAATATCAACTTTATTCCCCACAGGAACAACAAG
CAAACGAAAGAATTCATTGAGTATTTGCACGGACGATCCATCAACACAAC
AACCACAACAAACAAGACGAAAACGTGAAAAAGTCACACCACTATCATTG
TTACAGCAAATCGACTACAAAACACAGCCTCCACGTAAAAACGAACTCGA
GTTTTTAGCAAGTCTGATTGCTAAGAATGCTCCATCTACACTATCAACAA
ATTATGAAAACTCTCCTTTCTTATCGAGGAAAGATCTACCAGTTCCGCCC
TCTACTATCCGCTGCGACAAATGCTATTTCTCTTTTCCCAACAAAGAGCT
TCTCATAACACACAAATGCAGCGCAATACCTTGGATACCACCACCTCCGC
CATCAAATCTAAGAGGTGGACCACCCGTTGAGAAACATCAACCTCTACAC
CGCCCAATACACGTTAATACGCCTTACGCCCCAGGAATCGACTTCACGCC
AGCTTCAGCCCTTAATCCACATTATCACAGTTATTATCAAAATCTTGCGC
ATGCGTACCCTTCACCTCCTATGGAGCCGCCAATCAAGAACTTTGGACCT
TATAAATCTAGTATTTTAccattaaaaaacttttaa Coding sequence (CDS) from alignment at sc0000092_pilon:668773..672858+ >XLOC_034755 ID=XLOC_034755|Name=XLOC_034755|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2436bp|location=Sequence derived from alignment at sc0000092_pilon:668773..672858+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACACCAGTTAGCAATGGACAAACCACTAACCCTGCTGTTGCCAA
CCTcccaaacaaaagaatttctgatAACGTCATTCAAAAATACCTTTACG
GCTACAAAGAAATGAGGCTTGTTTCGTCGGAAGAAGTTTTATCCACTCTA
TTGAAAGATGGAAACACCAGTTAGCAATGGACAAACCACTAACCCTGCTG
TTGCCAACCTcccaaacaaaagaatttctgatAACGTCATTCAAAAATAC
CTTTACGGCTACAAAGAAATGAGGCTTGTTTCGTCGGAAGAAGTTTTATC
CACTCTATTGAAAGGTCAAATACGAAAGTGCACCAGCCTACCGGAAACAC
CACCTCTATCACCACGTAAAATCAGAACACCTGATGAAATATCATTATGT
TCGTCAAGTCTACCCGGATCGAAATTTGGAGCATGCGCAATAAAGAGGAT
TCAACAAGGCACTTGGTTTGGTCCTTTCGAAGGGAAGTTAGTGAGGACGA
CCGAGATTTCATCCAGTATGAACACAGACCACATGTGGGAGGTCAAATAC
GAAAGTGCACCAGCCTACCGGAAACACCACCTCTATCACCACGTAAAATC
AGAACACCTGATGAAATATCATTATGTTCGTCAAGTCTACCCGGATCGAA
ATTTGGAGCATGCGCAATAAAGAGGATTCAACAAGGCACTTGGTTTGGTC
CTTTCGAAGGGAAGTTAGTGAGGACGACCGAGATTTCATCCAGTATGAAC
ACAGACCACATGTGGGAGATCTTTCACGACGGAGAAGTCAGTCATTTCCT
TGACGGTTTTAACGAAAATAACTGGATGGCTTTCGTCCGCTGCGCTCGCC
ATAAGAAAGAACAAAATCTGGTCGTTTTTCAATATCACGGTTGTATTTAT
TATCGTTCAACGAAAGATATTTTGCCAGGAAATGAGCTCTTGGTTTGGTA
TGATACAAAATATACACAGCTTCTTGGTATACCATTGACTTGGAATGATA
ACAGAGATCTTTCACGACGGAGAAGTCAGTCATTTCCTTGACGGTTTTAA
CGAAAATAACTGGATGGCTTTCGTCCGCTGCGCTCGCCATAAGAAAGAAC
AAAATCTGGTCGTTTTTCAATATCACGGTTGTATTTATTATCGTTCAACG
AAAGATATTTTGCCAGGAAATGAGCTCTTGGTTTGGTATGATACAAAATA
TACACAGCTTCTTGGTATACCATTGACTTGGAATGATAACAGAGGAACAA
CAAGCAAACGAAAGAATTCATTGAGTATTTGCACGGACGATCCATCAACA
CAACAACCACAACAAACAAGACGAAAACGTGAAAAAGTCACACCACTATC
ATTGTTACAGCAAATCGACTACAAAACACAGCCTCCACGTAAAAACGAAC
TCGAGTTTTTAGCAAGTCTGATTGCTAAGAATGCTCCATCTACACTATCA
ACAAATTATGAAAACTCTCCTTTCTTATCGAGGAAAGATCTACCAGTTCC
GCCCTCTACTATCCGCTGCGACAAATGCTATTTCTCTTTTCCCAACAAAG
AGCTTCTCATAACACACAAATGCAGCGCAATACCTTGGATACCACCACCT
CCGCCATCAAATCTAAGAGGTGGACCACCCGTTGAGAAACATCAACCTCT
ACACCGCCCAATACACGTTAATACGCCTTACGCCCCAGGAATCGACTTCA
CGCCAGCTTCAGCCCTTAATCCACATTATCACAGTTATTATCAAAATCTT
GCGCATGCGTACCCTTCACCTCCTATGGAGCCGCCAATCAAGAACTTTGG
ACCTTATAAATCTAGTATTTTAccattaaaaaacttttaaGAACAACAAG
CAAACGAAAGAATTCATTGAGTATTTGCACGGACGATCCATCAACACAAC
AACCACAACAAACAAGACGAAAACGTGAAAAAGTCACACCACTATCATTG
TTACAGCAAATCGACTACAAAACACAGCCTCCACGTAAAAACGAACTCGA
GTTTTTAGCAAGTCTGATTGCTAAGAATGCTCCATCTACACTATCAACAA
ATTATGAAAACTCTCCTTTCTTATCGAGGAAAGATCTACCAGTTCCGCCC
TCTACTATCCGCTGCGACAAATGCTATTTCTCTTTTCCCAACAAAGAGCT
TCTCATAACACACAAATGCAGCGCAATACCTTGGATACCACCACCTCCGC
CATCAAATCTAAGAGGTGGACCACCCGTTGAGAAACATCAACCTCTACAC
CGCCCAATACACGTTAATACGCCTTACGCCCCAGGAATCGACTTCACGCC
AGCTTCAGCCCTTAATCCACATTATCACAGTTATTATCAAAATCTTGCGC
ATGCGTACCCTTCACCTCCTATGGAGCCGCCAATCAAGAACTTTGGACCT
TATAAATCTAGTATTTTAccattaaaaaacttttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000092_pilon | genome | sc0000092_pilon:668773..672858 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 625-1218:3493 |
| Aaloc | 385-621:2399 |
| Aaloc | 160-384:1098 |
| Aaloc | 1-156:1 |
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