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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:270483..273688- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034745 ID=XLOC_034745|Name=XLOC_034745|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3206bp|location=Sequence derived from alignment at sc0000084_pilon:270483..273688- (Clytia hemisphaerica_ch_hm2_pilon)
GCTCTTTCGGTAGCTGCGACTATCAGAAAAACAAGATGTTTGTCCAATGT
TCGATATTTTGGAGCACTGGGTACTAATCTTCAAAGGGGACTGGTAACCA
AAGCGCAACAAGATGAGTTTGAAGAAAATGGAGTTATTTGTTTGAGAAAT
GTTTTCAATCAGCACTGGTTGAAGACCGTCGAGAAAGGTAAGAATCCGTT
AACCGTTGTTCAACCTCATATCATTAGCGTTATTCTACAATAATTCAAAC
TTTTTTGAAATTACAGTAAAAAGTTTTCATTGATCAGCTCTATAATAGTG
AGTTTATGTATTTACGTCCTTTTGAGGACGGTAGAGTGACTGAAACAATT
TGGAAAAACCCGCACTTCTGACCTGCAAAATCGAGTACGGTAAAAGTGCT
GATTTACCGTCGTCCTTCAGATCGACATGCCTTAGGCGTAAACAATAGAA
ATATTGCAGCTGGATCTGATAGTCTCCAGAAGGGAGGGCTGGCTCCCGCT
GCAGAACCCGTTATTTCATCAGGCCGAATTCTGTATTATTAAAAACCTTT
CGATATTGCAAACCTTGCCGACCTTTAGAGCTTCAGGGTCTTTGAAAAAA
ATTCAATTGAATACAAGACAAGCAGAATCCTAATTTATCAGTCTCATACC
TTAATTATTCTTGGCCTGAGGCAGAAACAAGCTGACCTAAAAATTTCAGA
TGAGGCTTTACTCTTATTCTGATTTTCTTTTTCCGTTTAGGAATTCATCA
AAACATTTTATCGCCATCTCTCCATTGTGATTGGCTAACAAACGAAAAAG
ATGGGAAATCTTTATTTTTCAACGATTACTTCAACTTCAATAACATTTAT
GAATACAACTCATATGTCAGAGAATCACCAGTGACAGAAATTGCACAAGA
AATCACCAACAGCAAGGTACATTTCAATCAGAAATTTTCACATGTAGCAT
GTAGCATGAGAGTTAGACAATCGTTTTGGTCTACCATTTGAAAGGTTTAT
GTCCCTTTAAATCAATTCGTGAGGATCTGGGACTTAAAGTATGGGACTTG
GTATTTTGACTGTTTCAAGCATTGAGTTTCAAGCCCGAAGGGCTAGAGAC
AAAACTTTAACCCTTCTCAGGCAAGAGAAATTGAAGCAACTTATGTCCTA
TCCAAAACGCGCATAGAACACACCGTATTCATGACGACGGATTGTATCTA
GCGTTTGTGTAAAAACTACTCGTGGGCGTTCTGGATGGGAAATAAATGGT
TTCATTTCCCATTCAGGAGTCTCGCCTCTAGCCCTTCGGACTTGAACTCC
ATTGTTTTCTACTCAAGTCAAATAGGGAGGCATGATTGTCTTTAGGAATT
CTTATAATTTGACTTGTGTGCTCATTTTAATGACTTTTCTTTCGATTACA
GAAGATGGGTTTATTTCACGAGCACGTGTTTTACAAAGATAAAGGATCCA
TGAGAGAAACACCATGGCATCACGATCAAGCATATTATCCCTTTGATGGG
AACAAGGTAAGACTAAGAGATTGTAAACCGACAATATATTGATGTGTTGG
TACGCTCCAAGAACCTTTTTTTCAACATTCTCAATCGCCAAGTACACATT
TTTTCCAGCCCCTGAAATTAGCCAATTTTATTTCACTATCTCGTAAAGTA
AAAGGTTTTTAGATCACCTAAGCATGGCCGAAGATAGCCCAATATGGAGC
ATAAATATGGTATAATATCAGGGGTGGTCAAAGCGAACTTTTCAGAAAAT
AAATGCTAAGCAACCCCATCCCTGACCCAGAAATTAAAGTGGCTTATAAG
AAAGATGTGTAGCAAGAAAAGTACAGGTAGTGCATTAAAACTTCAGAGAA
GATGATAGATAAGAAAACTGTTCTTTACTGATGCAAATGTGACGTTTTTT
TTAGCTTGATTGACACTGGATGAGTTTCGCATACACTGAGTTACACATCA
AAATTTCACAAAAGTAATTTCGAAACAGTGTCGGGTTTTTGATCGATCAC
GGTTCCACCAATCATTTCATTTCATTTTACTTCATTTCTAGAATTGTTCC
ATTTGGATGCCGACACGCCAAGTCAGCAAATCGTGCAGTTTGAAATTCAT
CAAAGGTTCACATCACATCAACAAATGGTTTGTACCAAGACTTTTCAAAA
GTAATGAGAATTACATCGACATTGATGAATTGCCACAAGAGGAGCGTGAG
AAAGCACATGATATTAGAGAAGTTGTGGATGGCGTGAAGGATAAAGATAT
ATTGCAATGGCATCTCCAGGTAATTGAAAAATTTATTATATTATAATTTT
TTATAATTTTATAAAATATTTATTGCTAGACAATTTCACCGACCATTATA
ACCCTGCGTCACAGACCCGCTGTGACCCCAGCCCCACTGGAAAATTTGGC
AAAAAGTTCGTCTTTCCCAGTGCGAAATTGACTTTGATTTCAGCCCCATT
CGAAATTCAATGTTTAAAAATTGCACTTCATAACCATCCCGACTGGATTT
TTTAATCTTGGAACAATAGAATTTTTATCCCCATTGAGATTTAAATATAA
ATTTTTATCCCCACTGTGGGGAAAAGTTTCACCGGGGCTGTGAGACAGGG
GTGTGTTGTAGGGACAGAAATACCGGAAAATATATAAGCTTAAGCGCAGA
ATTATGGCAGTAGGCGGGGAGAAAAGATTTCAATGGCTAAAATTCTCAGA
AGAATTAGAGTGTGGTGGTGAGGTCCAGCATACACACTTTATATGTCAGT
TATTGTTGTTTTCTGAAAACAAGACCTCGTGCTCAGTGTACCTTAATACA
CCATTGAACGCACTTATTAAACAAAAAAAATCAACTTCATCCTCCGCGCG
GCCACAAAATTTGAGAAATTCTTTTGTTTGTTCTGGTTTAATCAGTGTTA
TATTTAACCCACTGGCTTTCTCTTTGATTTCAGCCTGGAGACTGTCTCGT
GTTCCACATGAAGACAATCCACGGTACAGATTCATCTTTTTCTAATCAAA
AGAGGATCGTCATCTCAACTCGGTGGTTAGGCGAAGATATCACTTATTGC
CAACGACCATGGCCTACTTCACCACCTAAAGAATTTTTACCGAAAGATTT
GAATTTTGATGATTTCATTGTAGAGAATAAACATTTTATGGGACAAGTGA
AGAAAATGTATAATGATGGTGAAGAGGATAAATTGTATAATAGGTTGTCA
AGTTAA Coding sequence (CDS) from alignment at sc0000084_pilon:270483..273688- >XLOC_034745 ID=XLOC_034745|Name=XLOC_034745|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1938bp|location=Sequence derived from alignment at sc0000084_pilon:270483..273688- (Clytia hemisphaerica_ch_hm2_pilon)
GCTCTTTCGGTAGCTGCGACTATCAGAAAAACAAGATGTTTGTCCAATGT
TCGATATTTTGGAGCACTGGGTACTAATCTTCAAAGGGGACTGGTAACCA
AAGCGCAACAAGATGAGTTTGAAGAAAATGGAGTTATTTGTTTGAGAAAT
GTTTTCAATCAGCACTGGTTGAAGACCGTCGAGAAAGGCTCTTTCGGTAG
CTGCGACTATCAGAAAAACAAGATGTTTGTCCAATGTTCGATATTTTGGA
GCACTGGGTACTAATCTTCAAAGGGGACTGGTAACCAAAGCGCAACAAGA
TGAGTTTGAAGAAAATGGAGTTATTTGTTTGAGAAATGTTTTCAATCAGC
ACTGGTTGAAGACCGTCGAGAAAGGAATTCATCAAAACATTTTATCGCCA
TCTCTCCATTGTGATTGGCTAACAAACGAAAAAGATGGGAAATCTTTATT
TTTCAACGATTACTTCAACTTCAATAACATTTATGAATACAACTCATATG
TCAGAGAATCACCAGTGACAGAAATTGCACAAGAAATCACCAACAGCAAG
GAATTCATCAAAACATTTTATCGCCATCTCTCCATTGTGATTGGCTAACA
AACGAAAAAGATGGGAAATCTTTATTTTTCAACGATTACTTCAACTTCAA
TAACATTTATGAATACAACTCATATGTCAGAGAATCACCAGTGACAGAAA
TTGCACAAGAAATCACCAACAGCAAGAAGATGGGTTTATTTCACGAGCAC
GTGTTTTACAAAGATAAAGGATCCATGAGAGAAACACCATGGCATCACGA
TCAAGCATATTATCCCTTTGATGGGAACAAGAAGATGGGTTTATTTCACG
AGCACGTGTTTTACAAAGATAAAGGATCCATGAGAGAAACACCATGGCAT
CACGATCAAGCATATTATCCCTTTGATGGGAACAAGAATTGTTCCATTTG
GATGCCGACACGCCAAGTCAGCAAATCGTGCAGTTTGAAATTCATCAAAG
GTTCACATCACATCAACAAATGGTTTGTACCAAGACTTTTCAAAAGTAAT
GAGAATTACATCGACATTGATGAATTGCCACAAGAGGAGCGTGAGAAAGC
ACATGATATTAGAGAAGTTGTGGATGGCGTGAAGGATAAAGATATATTGC
AATGGCATCTCCAGAATTGTTCCATTTGGATGCCGACACGCCAAGTCAGC
AAATCGTGCAGTTTGAAATTCATCAAAGGTTCACATCACATCAACAAATG
GTTTGTACCAAGACTTTTCAAAAGTAATGAGAATTACATCGACATTGATG
AATTGCCACAAGAGGAGCGTGAGAAAGCACATGATATTAGAGAAGTTGTG
GATGGCGTGAAGGATAAAGATATATTGCAATGGCATCTCCAGCCTGGAGA
CTGTCTCGTGTTCCACATGAAGACAATCCACGGTACAGATTCATCTTTTT
CTAATCAAAAGAGGATCGTCATCTCAACTCGGTGGTTAGGCGAAGATATC
ACTTATTGCCAACGACCATGGCCTACTTCACCACCTAAAGAATTTTTACC
GAAAGATTTGAATTTTGATGATTTCATTGTAGAGAATAAACATTTTATGG
GACAAGTGAAGAAAATGTATAATGATGGTGAAGAGGATAAATTGTATAAT
AGGTTGTCAAGTTAACCTGGAGACTGTCTCGTGTTCCACATGAAGACAAT
CCACGGTACAGATTCATCTTTTTCTAATCAAAAGAGGATCGTCATCTCAA
CTCGGTGGTTAGGCGAAGATATCACTTATTGCCAACGACCATGGCCTACT
TCACCACCTAAAGAATTTTTACCGAAAGATTTGAATTTTGATGATTTCAT
TGTAGAGAATAAACATTTTATGGGACAAGTGAAGAAAATGTATAATGATG
GTGAAGAGGATAAATTGTATAATAGGTTGTCAAGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:270483..273688 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 715-987:274 |
| Aaloc | 487-714:1166 |
| Aaloc | 382-486:1806 |
| Aaloc | 208-381:2465 |
| Aaloc | 19-204:3207 |
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