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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:363872..366025+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034743 ID=XLOC_034743|Name=XLOC_034743|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2154bp|location=Sequence derived from alignment at sc0000084_pilon:363872..366025+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGGCGAGGGCAGCTTATGACAATCATGCGGATGCACCGGACGAGCTCAA
TATCCGGAAAGGTGACATTGTTACTGTCATTGAGAAAGACATTGACGGTT
TAACCGGATGGTGGTTATGTCTACTACACGGAGAACAAGGTATCGTACCG
GGAAACCGGTTACAGGTCATTGATCCCATGCAATTAGATCAACTCGAACG
TAAATCAGCGTCCACCAAAAAACGGGCGTCCTACGAAACGGATGATAATT
CTGACGGACATGACGCCCTCGATGGCGGAGCACCCAATAATTATGACTAT
CTACCCAACCCTGTTAAAACACCCGGTTTTGTACCGCAGTTGAGTATAAA
GGACATGTTTGACATACCATTGAAAGGGAAAAGTGGAAAAGAACAAGTAG
AGATTAGTCAAGAAGTTTATGATATTCCGAGTAGTTTAAATTCAACTCTT
GATACAACCCAAGAGATTTACGACATTCCATCTAACAGGAGTTCCAATAG
AAGCTCTGGTAATTTGAATCAATCGAATAGTATTCCAACTGGTTATGATT
CACCACGTACCGGACGTAAAGAATACGACGCCGGGCCGACAGAAACGTAC
GACGTCCCTTCAAATTTAAACCAAAGATCGGCACGTAAACAACATGAAGG
TCCGACAGAAACGTACGACGTTCCGTCGCAATTAAACCGTAGTCGAGTTG
AAGAACCGTCTGAAACGTACGACGTTCCTTCGAATCTCAATAAACGTGTA
TCACCGAAACACATTGACGGGCCGACAGAGACTTATGACGTGCCGTCTAA
TCTGAGAAAACAGGCACCGCCAAAACAACCAGAACCGTACAGAGTTCCGA
ATAATATTCCAGCCGTCAGTGACGAGGTTTATGATGTACCGAAATCAAGA
ACCAGTATCGACGTCGACGAACTAATGGGTGAGATTATGGATTCTCCTTT
TAACGAGGATCCAATCAGTAGCACCATCAAGAGAACGCCTTTGAATAGTA
ACACGTCTACACCACGTGGTAGTTTTACGTCTTCGAATACGGGAATTGAC
GCCGCGGACGGCCCGTCGCAAGAGATTTACGACGTTCCAAAGAAAGACGT
GAATGGCGGTCGACCACCCAATACAGGGCGTAAAAACTTTCATCTACAAA
GTCCGGCTAGTAACACCATGTCACATACTTTACCACGTGGGTTCAGCCCT
CGTTCTAACAATGCCAAGAACTTGAAAAACACTCCAACTCGCTTACAAGA
GATTTATAACGTCCCTTCCTCATCTGTGGCGGCGACCGCTAACGCACCGT
TAAACCGAAGTACGCCCGGTACGCCACAGTCCGCCCGAAAATCAAAAGAA
TCTTACCCAACGTCGCAAGAGATTTATGACGTGCCAGCACCAAGGAATCA
AGACCCAACCACTAATCCCGAGTTTATCGATATGCTTAAACAACTCGAAC
GCACTGATAACGCAACTTCGTCAAATAGATCGAGTTTCAACTCCACTCAT
TCATCTTCAAAACGAGCAAGTCAGGAACTCTACGATGTACCGACTAGCAA
TCCAACATCTAGTCGTAGAAGCGACCCAACTGCAGTCTCGCAATATCAGA
ACACGCAAAGCGAATACCGAAACACCGGTATACAACAAGAAATTTACGAC
GTACCTCCGTCAAGTCACCGAAGCCAAGAAGAATTATATGATGTACCCCC
TCCACGAAACACTCAAACCCTCGGACGTTCAACGAAAATCAATCGTTTAT
CAGGGGGTAACGACCTAAACTTTATACCACCAGCTCAAACTTCAACACCT
CGAGGTCAGGAAATCTACGACACGCCCCAATCATCTTCAAGAAGGCGTTC
GCCCGCCCCTGAACAGTACAAAATCCCTTCATATAATAAGGCTTCGAGAA
ACGATGGCCCTTCGGAAATATACGAcgttccaacaaacaacaaaaactcT
TCCCAACAAGAAATTTACGATGTGCCGTCTGCACATGATGTTGACCGGGT
AATGGCGGATGCATACGGAAGTCATAAGACGACAAGGAACCACAACAACA
ATTTGTTAACACCACAATTGCCGGTGGACGATGATGACTATGTTGACTAT
CATGATATTTGGAGCAAACAACCACCCAAAGAATTGATGAGACAACACGC
TAAG Coding sequence (CDS) from alignment at sc0000084_pilon:363872..366025+ >XLOC_034743 ID=XLOC_034743|Name=XLOC_034743|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3666bp|location=Sequence derived from alignment at sc0000084_pilon:363872..366025+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGGCGAGGGCAGCTTATGACAATCATGCGGATGCACCGGACGAGCTCAA
TATCCGGAAAGGTGACATTGTTACTGTCATTGAGAAAGACATTGACGGTT
TAACCGGATGGTGGTTATGTCTACTACACGGAGAACAAGGTATCGTACCG
GGAAACCGGTTACAGGTCATTGATCCCATGCAATTAGATCAACTCGAACG
TAAATCAGCGTCCACCAAAAAACGGGCGTCCTACGAAACGGATGATAATT
CTGACGGACATGACGCCCTCGATGGCGGAGCACCCAATAATTATGACTAT
CTACCCAACCCTGTTAAAACACCCGGTTTTGTACCGCAGTTGAGTATAAA
GGACATGTTTGACATACCATTGAAAGGGAAAAGTGGAAAAGAACAAGTAG
AGATTAGTCAAGAAGTTTATGATATTCCGAGTAGTTTAAATTCAACTCTT
GATACAACCCAAGAGATTTACGACATTCCATCTAACAGGAGTTCCAATAG
AAGCTCTGGTAATTTGAATCAATCGAATAGTATTCCAACTGGTTATGATT
CACCACGTACCGGACGTAAAGAATACGACGCCGGGCCGACAGAAACGTAC
GACGTCCCTTCAAATTTAAACCAAAGATCGGCACGTAAACAACATGAAGG
TCCGACAGAAACGTACGACGTTCCGTCGCAATTAAACCGTAGTCGAGTTG
AAGAACCGTCTGAAACGTACGACGTTCCTTCGAATCTCAATAAACGTGTA
TCACCGAAACACATTGACGGGCCGACAGAGACTTATGACGTGCCGTCTAA
TCTGAGAAAACAGGCACCGCCAAAACAACCAGAACCGTACAGAGTTCCGA
ATAATATTCCAGCCGTCAGTGACGAGGTTTATGATGTACCGAAATCAAGA
ACCAGTATCGACGTCGACGAACTAATGGGTGAGATTATGGATTCTCCTTT
TAACGAGGATCCAATCAGTAGCACCATCAAGAGAACGCCTTTGAATAGTA
ACACGTCTACACCACGTGGTAGTTTTACGTCTTCGAATACGGGAATTGAC
GCCGCGGACGGCCCGTCGCAAGAGATTTACGACGTTCCAAAGAAAGACGT
GAATGGCGGTCGACCACCCAATACAGGGCGTAAAAACTTTCATCTACAAA
GTCCGGCTAGTAACACCATGTCACATACTTTACCACGTGGGTTCAGCCCT
CGTTCTAACAATGCCAAGAACTTGAAAAACACTCCAACTCGCTTACAAGA
GATTTATAACGTCCCTTCCTCATCTGTGGCGGCGACCGCTAACGCACCGT
TAAACCGAAGTACGCCCGGTACGCCACAGTCCGCCCGAAAATCAAAAGAA
TCTTACCCAACGTCGCAAGAGATTTATGACGTGCCAGCACCAAGGAATCA
AGACCCAACCACTAATCCCGAGTTTATCGATATGCTTAAACAACTCGAAC
GCACTGATAACGCAACTTCGTCAAATAGATCGAGTTTCAACTCCACTCAT
TCATCTTCAAAACGAGCAAGTCAGGAACTCTACGATGTACCGACTAGCAA
TCCAACATCTAGTCGTAGAAGCGACCCAACTGCAGTCTCGCAATATCAGA
ACACGCAAAGCGAATACCGAAACACCGGTATACAACAACTGGCGAGGGCA
GCTTATGACAATCATGCGGATGCACCGGACGAGCTCAATATCCGGAAAGG
TGACATTGTTACTGTCATTGAGAAAGACATTGACGGTTTAACCGGATGGT
GGTTATGTCTACTACACGGAGAACAAGGTATCGTACCGGGAAACCGGTTA
CAGGTCATTGATCCCATGCAATTAGATCAACTCGAACGTAAATCAGCGTC
CACCAAAAAACGGGCGTCCTACGAAACGGATGATAATTCTGACGGACATG
ACGCCCTCGATGGCGGAGCACCCAATAATTATGACTATCTACCCAACCCT
GTTAAAACACCCGGTTTTGTACCGCAGTTGAGTATAAAGGACATGTTTGA
CATACCATTGAAAGGGAAAAGTGGAAAAGAACAAGTAGAGATTAGTCAAG
AAGTTTATGATATTCCGAGTAGTTTAAATTCAACTCTTGATACAACCCAA
GAGATTTACGACATTCCATCTAACAGGAGTTCCAATAGAAGCTCTGGTAA
TTTGAATCAATCGAATAGTATTCCAACTGGTTATGATTCACCACGTACCG
GACGTAAAGAATACGACGCCGGGCCGACAGAAACGTACGACGTCCCTTCA
AATTTAAACCAAAGATCGGCACGTAAACAACATGAAGGTCCGACAGAAAC
GTACGACGTTCCGTCGCAATTAAACCGTAGTCGAGTTGAAGAACCGTCTG
AAACGTACGACGTTCCTTCGAATCTCAATAAACGTGTATCACCGAAACAC
ATTGACGGGCCGACAGAGACTTATGACGTGCCGTCTAATCTGAGAAAACA
GGCACCGCCAAAACAACCAGAACCGTACAGAGTTCCGAATAATATTCCAG
CCGTCAGTGACGAGGTTTATGATGTACCGAAATCAAGAACCAGTATCGAC
GTCGACGAACTAATGGGTGAGATTATGGATTCTCCTTTTAACGAGGATCC
AATCAGTAGCACCATCAAGAGAACGCCTTTGAATAGTAACACGTCTACAC
CACGTGGTAGTTTTACGTCTTCGAATACGGGAATTGACGCCGCGGACGGC
CCGTCGCAAGAGATTTACGACGTTCCAAAGAAAGACGTGAATGGCGGTCG
ACCACCCAATACAGGGCGTAAAAACTTTCATCTACAAAGTCCGGCTAGTA
ACACCATGTCACATACTTTACCACGTGGGTTCAGCCCTCGTTCTAACAAT
GCCAAGAACTTGAAAAACACTCCAACTCGCTTACAAGAGATTTATAACGT
CCCTTCCTCATCTGTGGCGGCGACCGCTAACGCACCGTTAAACCGAAGTA
CGCCCGGTACGCCACAGTCCGCCCGAAAATCAAAAGAATCTTACCCAACG
TCGCAAGAGATTTATGACGTGCCAGCACCAAGGAATCAAGACCCAACCAC
TAATCCCGAGTTTATCGATATGCTTAAACAACTCGAACGCACTGATAACG
CAACTTCGTCAAATAGATCGAGTTTCAACTCCACTCATTCATCTTCAAAA
CGAGCAAGTCAGGAACTCTACGATGTACCGACTAGCAATCCAACATCTAG
TCGTAGAAGCGACCCAACTGCAGTCTCGCAATATCAGAACACGCAAAGCG
AATACCGAAACACCGGTATACAACAAGAAATTTACGATGTGCCGTCTGCA
CATGATGTTGACCGGGTAATGGCGGATGCATACGGAAGTCATAAGACGAC
AAGGAACCACAACAACAATTTGTTAACACCACAATTGCCGGTGGACGATG
ATGACTATGTTGACTATCATGATATTTGGAGCAAACAACCACCCAAAGAA
TTGATGAGACAACACGCTAAGGAAATTTACGATGTGCCGTCTGCACATGA
TGTTGACCGGGTAATGGCGGATGCATACGGAAGTCATAAGACGACAAGGA
ACCACAACAACAATTTGTTAACACCACAATTGCCGGTGGACGATGATGAC
TATGTTGACTATCATGATATTTGGAGCAAACAACCACCCAAAGAATTGAT
GAGACAACACGCTAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:363872..366025 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1639-1833:1960 |
| Aaloc | 1-1638:1 |
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