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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000030_pilon:158034..160568+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034712 ID=XLOC_034712|Name=XLOC_034712|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2535bp|location=Sequence derived from alignment at sc0000030_pilon:158034..160568+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGGACCCATCACCTCCTCAGAAAAAGAGTAAAGTTGGTAAGTGTTGTCA
TATGTTTTTAGTATACATTGTATGATTTCTTATTACTGAACTGAAAGGTT
TGTAAATCTAATAGTAGGTCCATATCAGTGGTTTTTCACTGTCTGCTAGT
TTGTTTTGACCTtctttaccaaataaattaataataataataataataat
agctaTTATATTTTCCTTGGCTCTGTTAAAAGCATGAGgaattaattttg
tttttaagctTCCAGATCACAATCACAAAGAAAGTTTTCAGATGATCAGG
GGAAGAGAAAAAACTATGGTAAAGCCTTATCCTTGTAAGGTTGTAATTTT
TGGTTGCATTCTAGTTGCACCATCATGctcattaaaaagatatttgcgat
attatcctaacaatatttgaaaagaattaatagtggaaattgaaaattaa
agaaaaaatgaactttttgtagaattgaattACAATGACCatttccacga
ttttttacacaatttccattttcatttttcaatactttttggaataactt
ttATAAGATATGATATTCCACCATTAAATGTCTTTTCAAGAGAACAAATC
GACAATTCAATTCTGGCTCTCTAAAGTTACATCCAGTTATAGTCACTGTA
GAGTGTTTTGAGATTAACTCATTTTTTAACATACTGAcaatattaagcag
atattcaataggtaaaagttgtaGAGTGTAGGAACTATTCAATGACTGTT
TTTGCCTACgggtatataataaaataagttaaccctttcagtcccagttt
ttttttacctcaaaaaagaattatttcaatAAACGTCATAGAATTATTTT
ATTGTAGCCTTTTGGAAGCTCTAAATTGACTACTTGTTATCCTCATAATT
TTGACAACTTCAGTCTTTCATTTTAGAAGAATCACAGTtcatttctttgt
ttgattttattttaggCGCCCACAAAGTTGATTCAGATGATGATTCATCA
GACAGTGAAAGTTCTGAAAGTAAGTTACAtgttttaacctttttttaaat
ctattacatcttttttttgattAAGTTGCCCTAGGATTGAATTATAGACT
AAACTGGATGCTGACTTTTTAAATTGTTAAATACACTAGATATTTTGACA
AGATTACTGTCATTATTTTGCTTTACTTTTTTAAGGAGAAGATAATCGTA
CTATGAATTTGTCGACTTTGAAAAATAGTAAGTGCACTCTGATAGAAATG
TTGGGGATGCTGGAAACAGGGGCTATACATACATACAATGCAGGCGTCTG
GGTTTAAGATCTTAcaaaatattgtaaacaaaGGAACTAACTCTATAACT
ATCAGTTGCTGAAAAACacaacagatttttctattTCCCCAAATAACTTT
TGTAACCTATCTTATGACATGGGTTAAATGATTAATGATTCgcaaaataa
aaagacaaagaGCAAAAATAGACGTTATATAATGACATTGAAAAACTTTA
GTCTATCTAATTGAAGTAATAGAACCTAATTAtagcttttctttttcctt
ttatagCACATCTTTCATCACAATCGTCTCCCCTAATTCATTTTGACGGC
GGCCCATTTAATGAATCGCCACTGCCaaaaaaaaCCGTCCGAGAAAACGA
AAGTCCGAGACGGTCACCTCGTAAGCACGTAACACCAAATTCACATAAGT
CAACATTTTCAACGAGTAGCAGTGGAAAAGAGAGAAAGAGTGAATCAAGG
AGTGAATCAAAGAGTTCAAGAAAAAGTCTTGGTTTTGGCTCGGGAACCAA
ATCAAGCGAATCAGGTATGTATGACAGTTTTTACAAAGAATTAATGAGCA
CTGTCACTTAATTCTTGACAGTGCCATCTGTTTGATTATATTCAGCAAAA
GTATTTATGGTACATTTCTTTTCCGTATgattcttttgaatgaaatggTT
ATAcacagaaatcttttttttaatcggTGAAAAGATATTCCTTGTGTGCA
GTATGTAGTAAACAAATGTATATTATATTATAGGAAAAGGAAAACATCGC
AGCAAATCCGCAGCATGTAATATCCAAGACATGTACCCATTACCTGAAGC
AGGTCAGTATGGATTtatgaatttgattttaaagttGCCTTTCAATGAGC
TAATATTTTAAGTGTACATATATATTCATCACCGTCTCTTAGCATGTATG
ATACTACTGAAATCATAATATCTATATAGCCGCCTGATGGAAGACTGAGA
TGAAACGAAAACTTTGTGTATGATAGCAACAGTTTATGAGAAAAGCTTTT
CGGTTTTAGAAAACGGGACggaatgaataaataaaaaaactttacaatcA
TACTCATcgatttttcagaatttcagcGGAAGCAAATAAACCTTCTCttg
gaaataaaaaagttgGTGGGCGGTCCTAATAAGGACAAAATTTATGACCG
TACAGAGAAGAAAAAGTGTGAAACCGTGGAAGAATTGTGTGCATATGATA
AGAAGCTGGACGATCAGAAGGAGTTTGAAAATTTG Coding sequence (CDS) from alignment at sc0000030_pilon:158034..160568+ >XLOC_034712 ID=XLOC_034712|Name=XLOC_034712|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000030_pilon:158034..160568+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGGACCCATCACCTCCTCAGAAAAAGAGTAAAGTTGGGGGACCCATCAC
CTCCTCAGAAAAAGAGTAAAGTTGctTCCAGATCACAATCACAAAGAAAG
TTTTCAGATGATCAGGGGAAGAGAAAAAACTATGctTCCAGATCACAATC
ACAAAGAAAGTTTTCAGATGATCAGGGGAAGAGAAAAAACTATGgCGCCC
ACAAAGTTGATTCAGATGATGATTCATCAGACAGTGAAAGTTCTGAAAgC
GCCCACAAAGTTGATTCAGATGATGATTCATCAGACAGTGAAAGTTCTGA
AAGAGAAGATAATCGTACTATGAATTTGTCGACTTTGAAAAATAGAGAAG
ATAATCGTACTATGAATTTGTCGACTTTGAAAAATACACATCTTTCATCA
CAATCGTCTCCCCTAATTCATTTTGACGGCGGCCCATTTAATGAATCGCC
ACTGCCaaaaaaaaCCGTCCGAGAAAACGAAAGTCCGAGACGGTCACCTC
GTAAGCACGTAACACCAAATTCACATAAGTCAACATTTTCAACGAGTAGC
AGTGGAAAAGAGAGAAAGAGTGAATCAAGGAGTGAATCAAAGAGTTCAAG
AAAAAGTCTTGGTTTTGGCTCGGGAACCAAATCAAGCGAATCAGCACATC
TTTCATCACAATCGTCTCCCCTAATTCATTTTGACGGCGGCCCATTTAAT
GAATCGCCACTGCCaaaaaaaaCCGTCCGAGAAAACGAAAGTCCGAGACG
GTCACCTCGTAAGCACGTAACACCAAATTCACATAAGTCAACATTTTCAA
CGAGTAGCAGTGGAAAAGAGAGAAAGAGTGAATCAAGGAGTGAATCAAAG
AGTTCAAGAAAAAGTCTTGGTTTTGGCTCGGGAACCAAATCAAGCGAATC
AGGAAAAGGAAAACATCGCAGCAAATCCGCAGCATGTAATATCCAAGACA
TGTACCCATTACCTGAAGCAGGAAAAGGAAAACATCGCAGCAAATCCGCA
GCATGTAATATCCAAGACATGTACCCATTACCTGAAGCAGaatttcagcG
GAAGCAAATAAACCTTCTCttggaaataaaaaagttgGTGGGCGGTCCTA
ATAAGGACAAAATTTATGACCGTACAGAGAAGAAAAAGTGTGAAACCGTG
GAAGAATTGTGTGCATATGATAAGAAGCTGGACGATCAGAAGGAGTTTGA
AAATTTGaatttcagcGGAAGCAAATAAACCTTCTCttggaaataaaaaa
gttgGTGGGCGGTCCTAATAAGGACAAAATTTATGACCGTACAGAGAAGA
AAAAGTGTGAAACCGTGGAAGAATTGTGTGCATATGATAAGAAGCTGGAC
GATCAGAAGGAGTTTGAAAATTTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000030_pilon | genome | sc0000030_pilon:158034..160568 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 523-687:2371 |
| Aaloc | 454-519:2036 |
| Aaloc | 196-450:1559 |
| Aaloc | 154-192:1188 |
| Aaloc | 100-150:968 |
| Aaloc | 40-96:261 |
| Aaloc | 1-36:1 |
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