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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000305_pilon:292202..296657+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034707 ID=XLOC_034707|Name=XLOC_034707|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4456bp|location=Sequence derived from alignment at sc0000305_pilon:292202..296657+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCAAAGGAGAACAGACTAGGCTGCAAATGAAGAACAACGAggagaaaaa
aagttataacgGGGTAGAGAATACTACAAGTGTGCTGCTAAAGAAAATCT
TTACCTTTGCACTAATTCCGCCTTTTGCCGCTTTTCTTCTCGTGTTGCCA
AAACCTGGAATTGTTTGGGCGATGTCTGGTGTAGGCGCTCTTTTTGTGCT
GGGTGTGAACCTTTTGACGGAAGCAGCGGACAGTTCTATCACTAAAGAAG
GTATACTATacttttcaagtcaaatttgaaacgtcaaaaaaactaGTCGG
CAAAAATGACGAAAAGAAAGTCGTTTGCTCGGCGAAATCTTTTACCGAAG
GGGGTAGCAGCGAGAAGTGGATTATCGGATCAAACTATACTTATACAgta
tatattttcgaaaatttagcccaaaacccttggggaTAGGCATTTCTAAG
GGTTGGAGGGTGCCAAAAAAGGGGGGTCATTTAATAAGGGGGAATCAGAC
ATCTTTCCGCACTATAATTCCTCTATGTCTACTATCTTATTATTCTACTC
CATAGATGTTGATGAGGCGCTTTTGTTGTCAACCACTCCACCAGGGGGGA
AAGAAGCAAAAAACAAAGGTTTGTATAAAATTGCGTTAAAATTTGTCTTC
AGTTTTGGGAGGGTAACGATATGAAGTTTATGAACATTTGAATTCCaatc
atcaattttattatTCTACTCCATAGATGCCGATGAGGCGCTTTTGTTGT
CAACCACTCCACCAGGGGGGAAAGAAGCAAAAAACAAAGGTTTGTATAAA
ATTGCGTTAAAATTTGTCTTCAGTTTTGGGAGGGTAACGATATGAAGTTT
ATGAACATTTGAATTCCaatcatcaattttattatTCTACTCCATAGATG
CCGATGAGGCGCTTTTGTTGTCAACCACTCCACCAGGGGGGAAAGAAGCA
AAAAACAAAGGTTTGTATAAAATTGCGTTAAAATTTGTCTTCAGTTTGGG
AGGGTAACGATATGAAGTTTATGAACATTTGAATTCCAATCATCAATCTT
ATTATTCTACTCCATAGATGCCGATGATGCGCTTTTGTTGTCAACCACTC
CACCAGGgggaaaagaagcaaaaaacaAAGGTTTGTATAAAATTGCGTTA
AAATTTGTCTTCAGTTTTGGGAGGGTAACGATATGAAGTTTATGAACATT
TGAATTCCAATCATCAATCTTATTATTCTACTCCATAGATGCCGATGAGG
CGCTTTTGTTGTCAACCACTCCACCAGGgggaaaagaagcaaaaaacaAA
GGTTTGTATAAAATTGCGTTAAAATTTGTCTTCAGTTTTGGGAGGGTAAC
GATATGAAGTTTATGAACATTTGAATTCCAATCATCAATCTTATTATTCT
ACTCCATAGATGCCGATGAGGCGCTTTTGTTGTCAACCACTCCACCAGGG
GgaaaagaagcaaaaacaaaggTTTGTATAAAATTGCGTTAAAATTTGTC
TTCAGTTTTGGGAGGGTAACGATATGAAGTTTATGAACATTTGAATTCCA
ATCATCAATCTTATTATTCTACTCCATAGATGTTGATGAGGCGCTTTTGT
TGTCAACCACTCCACCAGGGGAAAAGGAAGCAAAAAACGAAGGTTTGTAA
ATGCCTTTAACCTGATCTTCagtgtttggaaaaaaatgatatGAAGTTTA
TGTGCATTTGAATTCCAAACTATTGCCCACCCAGGAAAATTGAGCTAAAA
CTCCCGGGGTGGCTACTAGGGCAAATTGGGTTAAGGGGATAAATAGAATG
TATAGAAGAGTCcaacgtagggtccatttttcaaacctcagcggagcacc
cccgttgatcggcaagggtagtacccctcCGGGCTAAAGCTCAATATGCT
TAGCTGATTGGATTTTCAGCTTTAAGTTATGCttagttaaaaaaacttca
aagcttccttaattttgattcattttcatttccacTTGTTTCTCAAGTTC
GTTGTTAGTTTTTACATTCACCCGATACCACATTAAAACCTTCTTCGTGT
TCTTCCCTGTTTCATTTATCCCGTTTTCGAAGTTTCAATGACTTTAAAAG
GCTTCAAGATACGCTTaacattatgcttatttttttttgcaaatttcagt
ATAAATATGCTTATAATCGTTATGCTTATAAAGCAAAATGTACGTATGTA
TCTGATTATTCTATTCTATAGATTATGATCGAGCCGCTCCCCCAGGTGGA
CGACCAAATTTCCGTAGGTGTTTTTCATAAATAATCTTGCACAAATGTCA
ATAGGCTTTCTTAAGTACGGTATCAATCCTTTCGTCAAAAGCTTTGCTAG
ACTTATCAAAGCCATTTTTTGCCCTTCATTAtttagtcatttttcaaaaa
gtggcaTTTTCGGGGGCAAATTGAAACCTATATAGGTGAATAGGTTGGCT
TTCAAAGATTCTAAATTTCTTTGCTGAACATCGCAATTTTTCTTTTGGGC
CAAGATGTATCCCGACGTCACTATTTCCCATGCAGAACCCTAAGCCCCAA
AAATCTGACGAAAAATCAAAGTCGCTACTAAAACCTAAAACCACTTATAC
TATTCGAtaactctcaaaatttgatatagaagacttttaaacgaaTATAG
TCGATTTTtcaacctaactcgagaaaattgtcaaaacgggacttttttgt
gatttttgacgtcaaatgagtGAAGAATTGACGTTTTTGGTCTTCGGAGC
TAATCTTTTCGAGTTAGGTTGAGAAATGGACTATATTCACATAAAAATTC
TCTATATCGtttttttAGAGCTATCGAATGGTATAAGTGCGGTTTTAGGT
TTTACCGACTTTGATTTTTCGTCAGATTTTTTAGTGAATAGTGCGAGTCA
ATAGTGCGAGTCAATAGTGCTTTACTTGAGGATAACTGAAGTCATGtttt
ttttAGCTAGACGTAACGCTCAAGAACATTCAGAGTATCCAGCTTACATT
TTAGCGTCCCATAGATCTAAAGAATGAACTCCAAAAGTTTCAGTTTGCGC
CCccaccccaaattttttttaaaaaatggctgTCAGCTTCCTGACTATTT
ACCTCGAGAGTTAACCCTTTGTGCATCTTGGCCAAAAATTTTTACTAGTT
TTTCATagacttaatattttttcatgaaatttgggCAGTGTGACTAAATC
AAGGATTGACACCTTCTGAcaaaattttatcattagtgATGATTCAttgc
cacctgatgacgtcatcaatttttgacATCTCCAAAAATAGGACCCCGCC
CCTCTAATTCTTTTTCGagcttcaatattttttgcttaaattttgTGTGG
GAATTCCATTTGACATATGTATACGGGGCACACGGTCAATTTTGCCCACC
TGTCATAggcgtgtattttacagaccgtcCCAGATTTgccttttttgcct
aaattagtgttaaattttgatatctcaagctattgacttgaaattttgac
cagtgataGGTATTGATAATAGAAGCTTGCTCTCAAGACTTTAGTGAGAT
TGGACCAGTAGTAATGCAGAAGGTGAGCATTTCAGGTAAAATACTGACTT
gtttgtaaaataccaaccacgcAGGTGGCCgaattgaaattttacacaTT
GTCTCAGATGGTCAAGACCTttcactggtgaaaatttcaactCAAAAGTT
ACTGTAGCTCCTGAGTTCCGGAAAAGGGgggtgtattttacagaccggtc
tgtaaattaccaAATACCACCGTGGAACTGtttttttCCCTATACTCTGA
TCTAACTTGGCAAATGGATgcaatttcaacaaaaagtacCAAGACAATCG
GATAATTCATTCTAGCAGCTAATTtaacattctggtctgtaaaataccaa
ctaaACAGGTGACCGACCTGAAAATTTGTAAATCGTCTTCATATTTGTCA
ATATCTgtcactggtgaaaatttcaagttcacaGCACTTGTCAATCCTGA
GATCCGAGGGGGAGGGGCTAACATGCCCCCCAAGATGCTCCACAtataaa
aaaataggaagatgcacGAAGGGTTAACTTACTAGCCAAGATGGATAGAA
AAAGATACtaggaagatcgattaaaagATGGCAGAGGATAGAGCTTATGA
ACTCCACTTGACCGGATTTTATTCATCTTGATAACATCAGCAGTTTTTTA
TGGGATGCAGTTTTTGCAAAGCGCCATCTAGAAACTTCTGAAAGGGCGCC
TAAAAAGCATTATGAGAGGGTGTTACGTCATATATACATCGAtttccttt
tattttatagaCCTAGAGTACGTACTAGTATATGATACTAGCAGAACGGA
TGCACACAGTTCCCATTGCGTTTTCATAAaatcgatcaaagatggcaatT
TCAATTGTATAAATAGTTGGAGAGATATAGATCCCGCACCTCAAGTTCGA
ATCGGG Coding sequence (CDS) from alignment at sc0000305_pilon:292202..296657+ >XLOC_034707 ID=XLOC_034707|Name=XLOC_034707|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1002bp|location=Sequence derived from alignment at sc0000305_pilon:292202..296657+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCAAAGGAGAACAGACTAGGCTGCAAATGAAGAACAACGAggagaaaaa
aagttataacgGGGTAGAGAATACTACAAGTGTGCTGCTAAAGAAAATCT
TTACCTTTGCACTAATTCCGCCTTTTGCCGCTTTTCTTCTCGTGTTGCCA
AAACCTGGAATTGTTTGGGCGATGTCTGGTGTAGGCGCTCTTTTTGTGCT
GGGTGTGAACCTTTTGACGGAAGCAGCGGACAGTTCTATCACTAAAGAAG
CTCAAAGGAGAACAGACTAGGCTGCAAATGAAGAACAACGAggagaaaaa
aagttataacgGGGTAGAGAATACTACAAGTGTGCTGCTAAAGAAAATCT
TTACCTTTGCACTAATTCCGCCTTTTGCCGCTTTTCTTCTCGTGTTGCCA
AAACCTGGAATTGTTTGGGCGATGTCTGGTGTAGGCGCTCTTTTTGTGCT
GGGTGTGAACCTTTTGACGGAAGCAGCGGACAGTTCTATCACTAAAGAAG
ATGTTGATGAGGCGCTTTTGTTGTCAACCACTCCACCAGGGGAAAAGGAA
GCAAAAAACGAAGATGTTGATGAGGCGCTTTTGTTGTCAACCACTCCACC
AGGGGAAAAGGAAGCAAAAAACGAAGATTATGATCGAGCCGCTCCCCCAG
GTGGACGACCAAATTTCCATTATGATCGAGCCGCTCCCCCAGGTGGACGA
CCAAATTTCCaCCTAGAGTACGTACTAGTATATGATACTAGCAGAACGGA
TGCACACAGTTCCCATTGCGTTTTCATAAaatcgatcaaagatggcaatT
TCAATTGTATAAATAGTTGGAGAGATATAGATCCCGCACCTCAAGTTCGA
ATCGGGaCCTAGAGTACGTACTAGTATATGATACTAGCAGAACGGATGCA
CACAGTTCCCATTGCGTTTTCATAAaatcgatcaaagatggcaatTTCAA
TTGTATAAATAGTTGGAGAGATATAGATCCCGCACCTCAAGTTCGAATCG
GG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000305_pilon | genome | sc0000305_pilon:292202..296657 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 358-501:4313 |
| Aaloc | 316-354:2224 |
| Aaloc | 253-312:1582 |
| Aaloc | 1-249:1 |
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