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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000334_pilon:7303..10382+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034692 ID=XLOC_034692|Name=XLOC_034692|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3080bp|location=Sequence derived from alignment at sc0000334_pilon:7303..10382+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATCAGAAGACTCACAGCGGCACAAACCCCTATTTCTGCAAAACCTG
TGATATATATTTCCCAAGGAAATCAAAGTTAACGAAACATTTGAAAACGA
AAAGCCACCAAAGGAAGTGTTCCAACCAGACTATGGAGGATTCTACTGAG
GAAAGTTGTTTGGATGATACCACTGATGAACCACCTGCCAAACGGAATCG
CCAGGACTTCGAGCAATCTGTGGATGAAAACCAAAAGCCTTTGGAATGTC
AACATTGCTGCCAGAGGTTTTCAAATCTacacttttcttcttttaaaggc
cgatctccactttcgcgcgaaaatgAGCGAAAACCTTTTCTTAATCATTT
TTGCCAGCagaaaaaattacgtcattaaAAAGTTTCGAGCGAAAAAATAA
ACCGTTACGTCATATTtgcccaatggaattgcttcattttttaaaccgaC
AAATGGCCTTGGTCAAAATCTTTCACTCATtttgcgcgaaagtggagacc
ggccatAAGGTGAACTATTTTCATGACACTCCTTAAAAATTGTTGGGAAC
TGGACCTCTGCATTCTATtcgaaagaaattaaatttgttgttctacgggc
ccgatcGACttttttttCACTGGAATTCCAAAATATACTCAGGTTTCAAC
AGCTGTAAATGTtgcagccaattcgattgacttccaaatttgccatactc
accaactttgccaaatctacaatttcaatgtcaaaagatcatagcttcat
ggcaaatttgtacatcgctacgccgccattatgatttccgttttgtgatg
cttagtcagcagttttctgtcggcgtttgtaaagtgaacgattttttaac
caatcaaattgccgatcggtattgttttgctttagcattggaaggtcttc
tatttttaaaatctttggcaaaagtggcaaaattggaacgaaaagaacac
aggtctcgtgggaatattgttttgtatggagacgtatggaggtaagttcc
aaaaatgccaagaatgccaagaatgccagattcaccacatcttttttatt
tggcatttatggcactcaaattttgccacatttgccaaatttttgtcaag
tcgaatgcaaaataattggcaatcagggcaaaaatggcatattttgaagt
caatcgaattggctgttgCATATcaagtttttcgaaaaatcgCATACCAG
gcgcaaaatgccattttagtGAGCAACCGGACCAAATTACCCGACGATCT
GCCTAACTGCTTAGTTTTTATGTTTAACATCATGACTAATGTTCCGGTTC
GAGTTGCAGAAAGATTCGAGATATAGAGATTCTCGACTGTACATTGTAAA
ACATTTTCcaataaagggataatcagatggctTAAGATATTTGACCTTCT
GTATGAGGTCCCAGTGTCTTTCGAAGTCGAGAtatcataatttgaaattt
ttaaagatgggTTCTTACATGTTCCgtcaaatttctattgttttcttgtC
AAAAACTTGTTACTATAGAATCTGATTATTCGTTATTTTACATGTACACT
GGCCACTAATTACTAATTACTTATGATATTTTGAGGTCTTGCTCTGGTTA
ATAGAAGGAATCCATTTtccaaatatctcaaatcaATTGATCATcctttt
agaccatgttcacacgttactgttccgttgcCCTCCTGTATGATTTTTGT
TGCGGATCGAGTGTATTCATATAGTATTCATATGTATTCatagttccgtt
ccgatgaaaaaagtggagcgaaaccgtttcgatctttttttctttgtaaa
cgtcttctttttgacgtttagaattttgaattttgacgttcatttgtttc
GGAActgtttcgtttcggaacggaaccgtaacgtatGAACCGTAACGtat
gaacatggtcttaaacatcaattttagaTTCCCCAGTGAAGAGGAGAAAA
GCAGTCACCAATGTTGTCTGTTGAGAGACAAGAAACCGAAAATCCAGCCT
AAAGAATATCTCAAATCGCGTGCACATTACAAGAAGTTCGTCTGTCCGTT
GTGCGACGTCGAGTATTTCTCTTACGTCGAACTAAACCAACATTTAACAA
CCGAGCATACGGTTACGGAAGAGACGACGTTCCCTTGCAAGACGTGCGAC
GTCACTTACCAATCGAAAGACAAATGGGTCCAACATCTAAACGACACAAA
ACACATGTCGTTACTACAACCTTATTTCCGCGCCACATGTTGTGAGAAGA
CATTCAAAACACATAAAGCGTGTTATAATCACGAGCGTGTCCACACTCGG
TCCAGTCCCTACCACTGTGCGAGGTGTGATCGATATTTCTTGAAACGACA
CCATCTGACTGTTCATTTGGAGGGTTGTGTAGACAGCGAACGACCCTACC
AATGTCCCTTCTGCGTGCGAACGTATAAGACAAGCAGCCAGTTACAACAT
CATTTAGAAGGCGGTCATTCCTTCCAATGCGCGACGTGTCTGGAAAACTT
CACGTGTAAACCGCACCTTAAGACACATTTAGAAGAATCGCCAACTTGCA
TCAAAAATATTTGCTCCAGATGTAACAATTTGGAATTTGAAACCTACGAA
CAGCTTTTAAAACATAAAGAAGAATCTCATTCGACGAAAGGCCGTAAAAC
GTTTTCGTGTTCCGATTGCGGGAAAACGTACTGCGAGGCGTTCAAGTTGA
AGCAACACATGAAGTGGCACGAGACAGGTCGGTATCCGTACCAATGTACC
GTGGAAGGATGTACTATCATCTGTTACAAGAAGTCGAAACTGGATTCACA
CCATAAGCGGGTCCATCTGAAACTGATGGAATACGAATGCAGTGCATGTG
GCGAAgagttcaaaacaaagaaaaatttggaCGAACATTCGAGCAAAGTT
CACGGTACCGAATCATTCACATGTCCAGTATGTGATAAAGAATTTTACAG
TCTTCGAACGTTCAAAGCACACGAACTAACACACTCTAAACTTCCAACGC
AAACTCATTTGAGCAACACTTCAGCAATCAACAATAGTAGAAACACTACT
AACGGAGACGATGTTTTGCTTGATTTAAGA Coding sequence (CDS) from alignment at sc0000334_pilon:7303..10382+ >XLOC_034692 ID=XLOC_034692|Name=XLOC_034692|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2838bp|location=Sequence derived from alignment at sc0000334_pilon:7303..10382+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATCAGAAGACTCACAGCGGCACAAACCCCTATTTCTGCAAAACCTG
TGATATATATTTCCCAAGGAAATCAAAGTTAACGAAACATTTGAAAACGA
AAAGCCACCAAAGGAAGTGTTCCAACCAGACTATGGAGGATTCTACTGAG
GAAAGTTGTTTGGATGATACCACTGATGAACCACCTGCCAAACGGAATCG
CCAGGACTTCGAGCAATCTGTGGATGAAAACCAAAAGCCTTTGGAATGTC
AACATTGCTGCCAGAGATGCATCAGAAGACTCACAGCGGCACAAACCCCT
ATTTCTGCAAAACCTGTGATATATATTTCCCAAGGAAATCAAAGTTAACG
AAACATTTGAAAACGAAAAGCCACCAAAGGAAGTGTTCCAACCAGACTAT
GGAGGATTCTACTGAGGAAAGTTGTTTGGATGATACCACTGATGAACCAC
CTGCCAAACGGAATCGCCAGGACTTCGAGCAATCTGTGGATGAAAACCAA
AAGCCTTTGGAATGTCAACATTGCTGCCAGAGaTTCCCCAGTGAAGAGGA
GAAAAGCAGTCACCAATGTTGTCTGTTGAGAGACAAGAAACCGAAAATCC
AGCCTAAAGAATATCTCAAATCGCGTGCACATTACAAGAAGTTCGTCTGT
CCGTTGTGCGACGTCGAGTATTTCTCTTACGTCGAACTAAACCAACATTT
AACAACCGAGCATACGGTTACGGAAGAGACGACGTTCCCTTGCAAGACGT
GCGACGTCACTTACCAATCGAAAGACAAATGGGTCCAACATCTAAACGAC
ACAAAACACATGTCGTTACTACAACCTTATTTCCGCGCCACATGTTGTGA
GAAGACATTCAAAACACATAAAGCGTGTTATAATCACGAGCGTGTCCACA
CTCGGTCCAGTCCCTACCACTGTGCGAGGTGTGATCGATATTTCTTGAAA
CGACACCATCTGACTGTTCATTTGGAGGGTTGTGTAGACAGCGAACGACC
CTACCAATGTCCCTTCTGCGTGCGAACGTATAAGACAAGCAGCCAGTTAC
AACATCATTTAGAAGGCGGTCATTCCTTCCAATGCGCGACGTGTCTGGAA
AACTTCACGTGTAAACCGCACCTTAAGACACATTTAGAAGAATCGCCAAC
TTGCATCAAAAATATTTGCTCCAGATGTAACAATTTGGAATTTGAAACCT
ACGAACAGCTTTTAAAACATAAAGAAGAATCTCATTCGACGAAAGGCCGT
AAAACGTTTTCGTGTTCCGATTGCGGGAAAACGTACTGCGAGGCGTTCAA
GTTGAAGCAACACATGAAGTGGCACGAGACAGGTCGGTATCCGTACCAAT
GTACCGTGGAAGGATGTACTATCATCTGTTACAAGAAGTCGAAACTGGAT
TCACACCATAAGCGGGTCCATCTGAAACTGATGGAATACGAATGCAGTGC
ATGTGGCGAAgagttcaaaacaaagaaaaatttggaCGAACATTCGAGCA
AAGTTCACGGTACCGAATCATTCACATGTCCAGTATGTGATAAAGAATTT
TACAGTCTTCGAACGTTCAAAGCACACGAACTAACACACTCTAAACTTCC
AACGCAAACTCATTTGAGCAACACTTCAGCAATCAACAATAGTAGAAACA
CTACTAACGGAGACGATGTTTTGCTTGATTTAAGAaTTCCCCAGTGAAGA
GGAGAAAAGCAGTCACCAATGTTGTCTGTTGAGAGACAAGAAACCGAAAA
TCCAGCCTAAAGAATATCTCAAATCGCGTGCACATTACAAGAAGTTCGTC
TGTCCGTTGTGCGACGTCGAGTATTTCTCTTACGTCGAACTAAACCAACA
TTTAACAACCGAGCATACGGTTACGGAAGAGACGACGTTCCCTTGCAAGA
CGTGCGACGTCACTTACCAATCGAAAGACAAATGGGTCCAACATCTAAAC
GACACAAAACACATGTCGTTACTACAACCTTATTTCCGCGCCACATGTTG
TGAGAAGACATTCAAAACACATAAAGCGTGTTATAATCACGAGCGTGTCC
ACACTCGGTCCAGTCCCTACCACTGTGCGAGGTGTGATCGATATTTCTTG
AAACGACACCATCTGACTGTTCATTTGGAGGGTTGTGTAGACAGCGAACG
ACCCTACCAATGTCCCTTCTGCGTGCGAACGTATAAGACAAGCAGCCAGT
TACAACATCATTTAGAAGGCGGTCATTCCTTCCAATGCGCGACGTGTCTG
GAAAACTTCACGTGTAAACCGCACCTTAAGACACATTTAGAAGAATCGCC
AACTTGCATCAAAAATATTTGCTCCAGATGTAACAATTTGGAATTTGAAA
CCTACGAACAGCTTTTAAAACATAAAGAAGAATCTCATTCGACGAAAGGC
CGTAAAACGTTTTCGTGTTCCGATTGCGGGAAAACGTACTGCGAGGCGTT
CAAGTTGAAGCAACACATGAAGTGGCACGAGACAGGTCGGTATCCGTACC
AATGTACCGTGGAAGGATGTACTATCATCTGTTACAAGAAGTCGAAACTG
GATTCACACCATAAGCGGGTCCATCTGAAACTGATGGAATACGAATGCAG
TGCATGTGGCGAAgagttcaaaacaaagaaaaatttggaCGAACATTCGA
GCAAAGTTCACGGTACCGAATCATTCACATGTCCAGTATGTGATAAAGAA
TTTTACAGTCTTCGAACGTTCAAAGCACACGAACTAACACACTCTAAACT
TCCAACGCAAACTCATTTGAGCAACACTTCAGCAATCAACAATAGTAGAA
ACACTACTAACGGAGACGATGTTTTGCTTGATTTAAGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000334_pilon | genome | sc0000334_pilon:7303..10382 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 268-1419:1929 |
| Aaloc | 1-264:1 |
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