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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:3099917..3105912- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034665 ID=XLOC_034665|Name=XLOC_034665|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5996bp|location=Sequence derived from alignment at sc0000007_pilon:3099917..3105912- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTTCACAACCATCCCTTTAGCCAGTCTCATGTCGCTCTACTCCAT
CCCTCAGGTGAGTGAGATGTTTTTTCAACGGGACTGGTACGAGCTAAAAG
CATAGATTTATAAAGCCCGACGGGCTAGATGTTGTACTTTAAGCTTTCCA
TGCAAAAAAAAGTGAATACCGCAAAAAATATTGCTGCTACTGTTTTCGAA
AACCCGCGAAGCTTCTGATTGGTCTAGCGCTGAAATTCTATTATGATGTC
ACGTGATCCTACCTAACATCGGCACACTTTTTAGCACGATATCTAGCCTT
TCGGGCTTTATAAATCTATGGCTAAAAGGTAATACTCCTTACCTCTTTTC
TGATAATCTGATGTCACATTCTCTCTCCATGCAGGAGAAAACATTCTTGA
TATAGCACCTTTTATTCTGGCCTCATTATGTCACGTTTTTATTTTCACGT
CATTATGTCACGTCTGTCTCTTCATTCCATCCTCTCATACGCAAGGGAGT
GATTTCAATTCTCTTTAACCATTATTCCCGGTTGGATATTAACACAAATC
ACTTTGTCTAGATTGTTAAGGCTATAGAGTATCCGATTTTCTTCTGTCTT
TATGCGGAAATCCGAATTTTATTCGTTTTAGTTCCGTCCCTATTTAACGA
GTCTTGAAAGAAGAAATTTTTGTGATTCTGGATATGCCATCAATATATCT
TGTAAAATTGTTTGTGAATTTACATCTAGGTCAGCCCTGCATCATCGAGT
CGTTTGTTGAGTAAGCGAGACCTCTACAAATCGTTTTTCCGGACAATTCC
ATCGGACAAGAATCAGATCAAAGCAATGCTAAAAGTGTTCAAGAGGTTCG
ACTGGAATTACATCTTCGCAGTCGGCTCAGACGATGATTATGGAAAACTA
GGTTCGTATTCTCAACAGTAACTTTTTATGCTTTTTAGAAATTACAAGAT
GAAAAATAATAATATAAATTCACTAATAACGTCCTAGTGGTAGAAGCCAG
TCCTAGAGCAAGAAGAAATTTTGTATTACCGGTGTTCAAAGCGACAAGCC
TTGAAAGCTTAGGCTGCTGGTATCCTCTAACGAATTCGTGCTTCTTTTAG
AGGATGCTTAATAGTCGGTAAATCTTCTTTCCAGAGATTTGCCGCTCTTA
GCCGTATATAGGCTAAAGACAGTTTTTAGCTGGCGGTTTTGTAGTAATAA
ATGGGATAATTAAGTTGTGCGTATTTTCTAGCATCTATTCTTTATATTCA
TGACGTAATGTTTTATACGGGAACACTCAAAGTAGCCCGGGTGTTTACCA
CTAGTTTTAATGATTAGATTCAAAATTTATGTCAAACATCCGGTGTTTTT
TTTGGTTGCTTCCGGCTAAAAATAAATAGCTACCTCGGACAAGCAATATA
TGGAGAAGTTAGGACCTGTAAGCGTTGAAGTTGATCTAGAAGTCATTAAT
ACAACAACTTTTCAATTTACAGGTGTATCCGACTTGAAACAGGAGGCAGG
ACCTCTTGAAATTTGCATCACCAAGGACGAATATATCCCTTACCAATCCG
ACAAAACTGGTGAAAAGGTGGATAGTGTCATCCAAAAGATCGCAAAGGAG
GAGAAAGCCAAGGTCGTGGTGCTATTCTTGTATGTTCAAGGACTTGGTGA
TTTGATTCTCCAGAAAGCTGCAGCAATGAGTAAGTGAAATGTTCTTTGAA
GCCAGTCTTTATATTCACGAGGTTGTTAGCTTATCTTGCAAATCCAATGC
AGAATACTTTTTCCGCACACTCTTTCGTTTTAGATTCGTTTTGCGTTTAT
CTTCATTGGTTTCAAGCTTAACTTTTACTCTAGAACTGTCTAGACTATGT
TTTTGCAAGCTTAGTACTTTTTTTAAGGTTTTTCAAGTCAGCGATACAGG
CAATAAAATCCCAATTTGTTTTTAAGACATTGATTCTTCAGAGGAATTTT
TAATCGTTGATATTACGAAGCTGAAGTGATTACACTATTGTAAATTTTCT
TTGAAAAATCTTCTCTCGAGACAGCTTCCTTCATATATTTTACCATCTCT
CACTAGAACCGCCTCTTGAGCGCATCTGGTTGACAAGTGAATCATGGAAC
CCGTCAGCCGCTATCCATTTTTCAAGCAACATTTCACGGTATTACAACCA
AGCGGTCGGTATCCTGTCTATCTCAATCAAAAAGTATCCAATGACTGAGC
TAGTGGACTACATGACGGAACAAGTCATCGAGAATTGGGAATGTAACTTC
TGGTTCCGCAAATACATCCAACAAAACAAACCATTCGAATGTAATATCGA
CAGCATTTCACTGGACAAAAATACTTTTATTTGCAAGCCAGATACCAATG
GTAAAGTTAAGAATATATCGGTGGCCGCCGTTTTAACAGATATCAAGAAA
TTGCCTGGAAATATTGATAGGTAGGATTAGTCTATTTGTCTTGTGACATT
CATACTCGGTAAAATTACACTTTCGAGGCTTACTAAAATCAGGAGACCTA
ACCAGAGTGGTTAGTGGTTTTGTGAACATACGCAACTTTGACTCTTGTCG
CAGTGTTGTAAGAGATTCTTTGACATCGACATCGTATCTTAGTATGTGAG
CGTTTATTTGATATTCTTATTTATACAACTTAGTGTTTATGCGTGCAATT
TTCCTTACATTTATTCCTGTATCTTAGACTGATAGATGCTACAACAGCTC
TTGGTCATGCAATTCACAAGGTGGTTCGAACTCAATGCAATAATTCACCC
TGCTATATTGACACTGAAAATCTTGAGACTGCTGTAAGTTTTACTCAATT
TATAACTGGAGGTCAGTCCTTAGAATCTGTGACAACCTTAGAGATGTATA
TAATATGGTTCATTTGATAATAGATTTTTTCGAGAGTTGGGGCATTTTTG
AGCAAAAGAAAGAGGTGAAGAAATAATCGCACTATGGGTTATTTTTACAC
ATTTGGCGCGCCTTCAAAGAGAACTTTCGTCCTTTCGGACTCGGAAAATT
AAAAACAAAAAAATCACTCGTGCCATTATTTTCGAATTGCGCTCGTTAAC
ATGTGATTGCATATACATAGCGCTTAAAATATGTGCAAACGATTAAATTC
GAATATAAGCGGTTTTTAACAGAGTCTCATACTTACCTTCAAACACGAAG
AGTTGCACGTGATAAGAAATCCTGTTCAATTACGAGACAATATTTGACCT
ATATTGTACTCGATATGACAAACAATATTGAATCCCTTTTCATTCAATAT
ACCAGAGTGTATCTCACGTTAATCGCTTCGTAGTACACTCTGTACGCATT
GTCTAATTCCCGTACGGAAACCTCTGCGAAGAAGTATGATGCATATATAG
CAAAACTTTTCTCATCGTCTACCTTCTCTCACCAACACTTCATCGCAACG
GTCGGTTTTAAAAGTTTCAAATGAGAAAAGACAATGACAACAGACCCTCT
ACGGCAATGTATTTTGAAATTAGCGTAGATACTGGGTCTGTGTACGGACA
AGAGCTATACTGGATTGAAAGAATATCTGAGTAAAATAAACAAGTCATTT
TTCAGAGCATCACAAAACAGATGTTTAAGACGAACTTCACGAACGAACAA
GGCGAGATCATTTCTTTCACCAAAGATGGTAACCCACTCAATGCTTATTA
CACTATCGAAAACTTGATCTTCAATAACGAGACGGGCGCTTTTGAATATG
TTCCTGTCGGACATTGGGCGTTGTACAATAATTCAAGAACTGAACTGAAA
TTGAATGAATCAGCAATCGTGTGGCCTCAGTGGTTCAACAACAGCCGACA
AAAAACTGATGGCTCTGGAGACTGGGTAAGATAACCTTAACTTTATCGTT
CACAGGTTAGAATATTACTCTTTCATCTTTTAGTCCATCTTGACTGATTA
AAACCCAGTCGAGCCGCGCCAACTCAGCGAATGAGTAGCTTAAATTGGGT
AATCTCTTGACTCTATTCGAACCTTCCGAACCTTCCTAGCCACTTTTTTA
CTGGAACAAGTAAAATTCGAGTAAACAAATTACTCGAACTCTTCAAATTT
TTTCAAAAACGAGTAAGGAACTTACTCAAACTTTGGATTCTAAGGTATGT
TAAAAGTATCTTTTGGTAATTACTCGAACTTTTCTTTGATTGAACCTCTC
GAGCTTATCTTCGAGCGAACTATCCCGAACTTTTTTTCGGTCAAACTTCT
CGAACTTTTGTTCAATCGTACTTCTCGAACTTTTTTTTCAATCGAATTTC
TCGAACATTTCTTCAATCGAACTTCTCGAACACAAATTTTTGAAAATTTC
CAAAAGTTCGAGTAAAGGAATTACTCGAACTTTACTTGTTCGAGTAAATT
CGAGTAGTTCGAACTGTTCGAGTAATGGTCTATATAATAAGTTACTAGGA
GCTGAGTCAAGGCTTGGTGCTCCATTTCAGCAAAACCCAAAAATGGATTA
CTTTACCACATGTCCCACTTTGTCCCGAAAAGGTTTTATGCAATGGGCTC
TTCCAGAAAATGTCCGTGCATGGGGGTGAAGGATATAGTCCCTAGGAATT
AGTGGAAAATCTACAAAATTTGCTTTGTCTGGAAAAGCCCAATGTTCTAG
ACTGGAGTCGTTTATAATGCGTGTAATACTAATAATACCAATACTAATAA
TAATAATACGGGATTTAGTTTGTATAAACTAAAATTGTTCCCTTCATTAC
TTTTTGCCTTATTTCTACTATGTATAAATTAGTCGTCTAGCTTGCTATAC
TACCAATGTTCCAAAATTACAAATTTTTCAAAATTTGAACATTGCATTGG
GATTGCATTACAAAGAAAAATCGCATATGATACCAGTAGCACTTAACGGA
TTAAAGGAAAAACGCGTACGTAAAACTTGTAGTGAACGTTACTATTTCAG
GTGGAAACAGACATCCCAGCATCCCGATGTAGCGATCGTTGTGAACCAGG
TTACAAAGTGGTGGGTCGAAGTAGTTGTTGTTGGAATTGTCACGCCTGCA
CCGATAATAATCACACCAGTCACGAAATGGCTGAAGAGTGTAAACCGTGT
GGTAAGCCTATTCTTACGTCCAAACAACATCTTTCTAACGTTCATAAGGT
TTTCTTTTTAGTTTGTCAAGCTCGAATATGGAAGGCCTACTCTCTGTCGA
TTTCTTTGCATTACCTTAAGCGACGCTAGTCAAAAATTTTCATTTTCTAG
AGGTTGGAATATTATTGTAAATCTATTGTAAATCTATTGACCTCTACCAT
GAAAGTTAACCCAGGGTCGATTGGAGTCATTCTACCCTACTGTAGACTAA
GTTCGACCCGATCATGTAGCGTTAGGTGTTGAAAGTACGATACTCATAGA
TTTATATAAAGTCCGAAGGGCTAGATGTCGTGCCTTGGCTGAAAAATGTG
CCAAGGTTAGGTAGGAAATCCTACCTAGGTCACGTGACATTACAATAGAA
TTTCAGCTCTTGACCAAAAAAAAGCTTTGCAGGTTTTCGAAAACAATAGC
AGCAATATTTTTTTGCTTGGAAGAGCTTAAAGCACGACATCTAGCCTTTC
GGGGCTTTACAAAAATCTGTGACCATACTATCATCAAATCGAAGTTGTAT
AACGCTAACGACGACCTAACCACTGATCACATCTTCACGCATTACGTTTT
CCTTTCGTGAGTCACTCTGATTTAAGGTCTTCGCTATCCATAGGTACCAC
GTGAGTTGATAAAATGAAATTAATTTCCTTAGGTAATTACCATCATACAC
TGGATAACATCCGTTGTTTGGAGACACCCATCAAATGGTTAAAAATTGAC
GATCCTGCTGGTCTTTCAATCGTTATCATCTCATGTCTGGGTATCTTGGC
TAGTATTGCAACTTGCATCTTTATGTACCGTTTCTGGGAGTTAGTGACAG
TCCATGAGAAATCAAAACATTTGCTGACTTTTGTTTGTGTGTTGTTATTC
TTCACTTTCGGTTATGGCCCTTTGCACATTATCGAACCAACTTTGA Coding sequence (CDS) from alignment at sc0000007_pilon:3099917..3105912- >XLOC_034665 ID=XLOC_034665|Name=XLOC_034665|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2478bp|location=Sequence derived from alignment at sc0000007_pilon:3099917..3105912- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTTCACAACCATCCCTTTAGCCAGTCTCATGTCGCTCTACTCCAT
CCCTCAGATGAGTTTCACAACCATCCCTTTAGCCAGTCTCATGTCGCTCT
ACTCCATCCCTCAGGTCAGCCCTGCATCATCGAGTCGTTTGTTGAGTAAG
CGAGACCTCTACAAATCGTTTTTCCGGACAATTCCATCGGACAAGAATCA
GATCAAAGCAATGCTAAAAGTGTTCAAGAGGTTCGACTGGAATTACATCT
TCGCAGTCGGCTCAGACGATGATTATGGAAAACTAGGTCAGCCCTGCATC
ATCGAGTCGTTTGTTGAGTAAGCGAGACCTCTACAAATCGTTTTTCCGGA
CAATTCCATCGGACAAGAATCAGATCAAAGCAATGCTAAAAGTGTTCAAG
AGGTTCGACTGGAATTACATCTTCGCAGTCGGCTCAGACGATGATTATGG
AAAACTAGGTGTATCCGACTTGAAACAGGAGGCAGGACCTCTTGAAATTT
GCATCACCAAGGACGAATATATCCCTTACCAATCCGACAAAACTGGTGAA
AAGGTGGATAGTGTCATCCAAAAGATCGCAAAGGAGGAGAAAGCCAAGGT
CGTGGTGCTATTCTTGTATGTTCAAGGACTTGGTGATTTGATTCTCCAGA
AAGCTGCAGCAATGAGTGTATCCGACTTGAAACAGGAGGCAGGACCTCTT
GAAATTTGCATCACCAAGGACGAATATATCCCTTACCAATCCGACAAAAC
TGGTGAAAAGGTGGATAGTGTCATCCAAAAGATCGCAAAGGAGGAGAAAG
CCAAGGTCGTGGTGCTATTCTTGTATGTTCAAGGACTTGGTGATTTGATT
CTCCAGAAAGCTGCAGCAATGAAACCGCCTCTTGAGCGCATCTGGTTGAC
AAGTGAATCATGGAACCCGTCAGCCGCTATCCATTTTTCAAGCAACATTT
CACGGTATTACAACCAAGCGGTCGGTATCCTGTCTATCTCAATCAAAAAG
TATCCAATGACTGAGCTAGTGGACTACATGACGGAACAAGTCATCGAGAA
TTGGGAATGTAACTTCTGGTTCCGCAAATACATCCAACAAAACAAACCAT
TCGAATGTAATATCGACAGCATTTCACTGGACAAAAATACTTTTATTTGC
AAGCCAGATACCAATGGTAAAGTTAAGAATATATCGGTGGCCGCCGTTTT
AACAGATATCAAGAAATTGCCTGGAAATATTGATAGAACCGCCTCTTGAG
CGCATCTGGTTGACAAGTGAATCATGGAACCCGTCAGCCGCTATCCATTT
TTCAAGCAACATTTCACGGTATTACAACCAAGCGGTCGGTATCCTGTCTA
TCTCAATCAAAAAGTATCCAATGACTGAGCTAGTGGACTACATGACGGAA
CAAGTCATCGAGAATTGGGAATGTAACTTCTGGTTCCGCAAATACATCCA
ACAAAACAAACCATTCGAATGTAATATCGACAGCATTTCACTGGACAAAA
ATACTTTTATTTGCAAGCCAGATACCAATGGTAAAGTTAAGAATATATCG
GTGGCCGCCGTTTTAACAGATATCAAGAAATTGCCTGGAAATATTGATAG
ACTGATAGATGCTACAACAGCTCTTGGTCATGCAATTCACAAGGTGGTTC
GAACTCAATGCAATAATTCACCCTGCTATATTGACACTGAAAATCTTGAG
ACTGCTACTGATAGATGCTACAACAGCTCTTGGTCATGCAATTCACAAGG
TGGTTCGAACTCAATGCAATAATTCACCCTGCTATATTGACACTGAAAAT
CTTGAGACTGCTAGCATCACAAAACAGATGTTTAAGACGAACTTCACGAA
CGAACAAGGCGAGATCATTTCTTTCACCAAAGATGGTAACCCACTCAATG
CTTATTACACTATCGAAAACTTGATCTTCAATAACGAGACGGGCGCTTTT
GAATATGTTCCTGTCGGACATTGGGCGTTGTACAATAATTCAAGAACTGA
ACTGAAATTGAATGAATCAGCAATCGTGTGGCCTCAGTGGTTCAACAACA
GCCGACAAAAAACTGATGGCTCTGGAGACTGGAGCATCACAAAACAGATG
TTTAAGACGAACTTCACGAACGAACAAGGCGAGATCATTTCTTTCACCAA
AGATGGTAACCCACTCAATGCTTATTACACTATCGAAAACTTGATCTTCA
ATAACGAGACGGGCGCTTTTGAATATGTTCCTGTCGGACATTGGGCGTTG
TACAATAATTCAAGAACTGAACTGAAATTGAATGAATCAGCAATCGTGTG
GCCTCAGTGGTTCAACAACAGCCGACAAAAAACTGATGGCTCTGGAGACT
GGGTGGAAACAGACATCCCAGCATCCCGATGTGGAAACAGACATCCCAGC
ATCCCGATTTATGGCCCTTTGCACATTATCGAACCAACTTTGATTATGGC
CCTTTGCACATTATCGAACCAACTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:3099917..3105912 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1207-1239:34 |
| Aaloc | 1177-1203:1097 |
| Aaloc | 907-1176:2442 |
| Aaloc | 802-906:3319 |
| Aaloc | 439-798:3939 |
| Aaloc | 232-435:4523 |
| Aaloc | 58-228:5268 |
| Aaloc | 1-57:5997 |
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