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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000452_pilon:80385..85015- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034661 ID=XLOC_034661|Name=XLOC_034661|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4631bp|location=Sequence derived from alignment at sc0000452_pilon:80385..85015- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGAAGGGAATACTACCACTGGAAGCTTTGAGAATTTGTCATGATAA
AAATCCTGGAATGCGAAAATATATGGAAGATGAAATTTCGATTGTTCATG
CCCCCAATGATCAAATACCAACTACTTATCTTGGAGTTTTTGATGGTCAT
GGAGGAAAGGAGGCTGCAATATATGCTCGAGACAATTTATTTAAAAATCT
CAAACTTCAACCTGGATTTTTTGATAACGAACCATCAAAAGTAAAGGAGG
CTATTCGAGAAGGCTTCATCAAAACACACATGGATATGTTTCAAATAGTT
GGTGAGCAAATTTTCTGTTGTGCTAGAGACAAAGTAACTTTAAATTTTTG
AGTCCGTATAAGTGTTTTTCCATCATAAAGTGAGGCCCCCAGCAGCGACA
CCCCTAATCACGCCATCACGCAAAAAAAATTTCTCTATCACGCAAGGACC
CTGCCGACGCACCGGACTTAATGAACACCGAACACGCGAAAGTCCGGTGT
AAATGAGAATTTTTTTACCACGGGACAATTTCTACACCAGAGTTAAGGAA
GTCGGATGTCCGGTGTCGGAGAAGGATATTTTTCCCACCGGACAACAATC
AAAACATCAGACATGACCAGTCTGGTGCGTCCGGTGTTTCTTAATCTTTT
GTTTCATAAATGTCCGGTGTCCTAAATTCCCTGTATGCAACACCAGACTG
ACACCAGACTTATTGCGTCCGGTGTAGCGAAAGGATACTTTTTGCCATTG
GGGACAAATACACTGAACAGTCCGGTGCGTCGACAGGGTCCTATCACGCA
TCATGAAAATTTACTAAAATTTGTCATCACGCAAAAAATAGCGAAAATAG
CCCAAATCACGCATCACGCCTCAAATTTTTGCCCTATCACGCATCACGCC
AAAATCTTGATCACGCCATCACGCCAATAAAAATCTCTAATCACGTCATC
ACGCAAGAAAAAGTCCCAATCACGCCATCACGCAAACCGCTGGGGGGCCT
CATAAGTCATTGGTTGTAATGTTGTATCAGTCTAAAGAATAGAGACAAAT
TTATTTTCTGATACTCAGAGGTTTGTGCCGTTTCAGGCAGTTTTCAGTCA
GATTTTAATGTTGTAACGTTGTAATTTTAATGTTGTAATATTGTATATGT
TCCAAAATTAACCATAGGCCTTACTAGGGGAAGTTGGCCATCCTATTATT
TGTGTCATTTTAATTTTGAATATATATACATAATCTGGCATGAGTTGAAG
CAAAGTTTTATTCCATAATTCAATTACACAAATTAATAGTGTTAGGAATA
AGCCTTAAGGCAGAATGTTCTGCACCGTTGAGGTTTTGTGTCACGTATGT
AACAACTGAATTAAATATGTAGCTACTCTATTAGTACTGTGAGATAGCCC
TGCCTAAACAGACCTTTTCGCCTTTCCATCCGCCATCTTGAATTGTATGC
AAAAATAGAGGAGAGAAAAAACTGTGGTTGGATTTAGTTGGAAAATATGC
AAAACATAAGCAAGTTTACACAAAGCTTAAAAAGACAAAAAAGCATCTTA
TAAAGAAATAATATTATAATCATTAAAACAATTAAAGATGGAATTTTTTA
ATCCAAAAAGACAGCCCTGTGAATGCAGACAAAATCATATCGGCATGTAA
GTGCCTACCAAAACGGCCGTAGGCCGGCAAAATTTTGTCGACTTAGAGGT
CATTTTAGGTCTGCAAAGACAATAATTAACGAACTAACAAATTCAGCTGC
TCTATAATTGTGTTAATAAGTTTTATGTTTTATAAAGAGAATGGAACGAG
GCTTGATTATCATGTGTTATCAAATGATAACACAATTAGATTAACCTGAC
AAATAATATTTTTCCTCTTTAGGTCGGCTTTGCCGACCCAAAACATTTCT
TTTGTCGGCATGCAGACCTAGAGTGTAAACTAGTCGGCAAATAAAAGCCG
ACTTCAGCTCAAGTTATGTCGGCTTTCAGGTCGGCATTGCCGAATGCCGA
CCTGGATTCACAGGGCTGAAAGAAATATTTACAGAACAACAAAAGCCTTT
TAGAAATTTTTTCTTAAAGACATTGCATATTCTGTTTTCATGCCATTATT
AAAAAATTCCACCAAGACAGAGTACACACATCAAACTTTCAAAACACGCA
AACTGAAAGCAGTATATAATTATGACGTCACACATTCAGCGGGTTCGGAT
CAATGTTTTGATTTGATTGTCTGACGGTTCTATTCCCAGGAGAATAATTT
ACCGTCAGCAGAATAAGGAATATTTCTGTCCTTCGCTGGTGATTTTTCAG
CTTGAGAATATGTCTAATGTTATGGTTTTTTGAAGTGCTTGTTCTAAGAG
ATGAGCGAATTTGATTATTTCAATGCCAATTATGCATGTAAGTTTTACAT
TAATACTTTCTTTTTGCATATGTTTTGCATACTTTCTAAGGTAATTTCAC
CACGGCAATTCGGCCACCATAATTTTTGCATATAATTCAATATGACGGAT
ACAAACATTCCCTCTCCAAGTTGAACAATAAACTATTGCAAGTCTCGGAA
CAAAACATCCAGACAATGTCAATCGAACAACTTTGAACAAAAATCGCAAT
CGAACGTAATCGGATGCAGTCGAATAATTGCGATTCAATTGTCCAATGTA
ATTGAATCTCAATCGAACGACCGATTCCTGGGTAATATTCCATTGTGTTG
TGTTCAATTGCGTTCGAGTAAGGTTAGATTGGTTCAATTAATAGTTGACT
ATGTTGACCATTTGTTCGATTGATTGTCAATATACCTTTTCGCCTTTCCA
TCCGCCATATTGAATTGTATGCAAAAATTATGGTGGCCGAATTGCCGTGG
TGAAATTCCCTTAGAAAGTATGCAAAACAAATGCAAAAAGAAAGTATTAA
TATAAAACTTACATGCATAATTGGTATTATATTAAAGTGTAATCTTGTAG
AGTAAAGATTAACTTTGTTTCTTTTGAAAACTAGAAATAATCAAATTCAG
TCATCTCTTAGAACAAGCACTTCAAAAAACCATAACATTAGACATAAACT
CAAGCTGAAAAATCACCTGCGAAGGTACAAAAATAATCCTTATTCGGCTG
ACGGTAAATTATAGACCTTTTTTTAAAGAGACAGCCATGTTGAATAATTA
TGTACTCCAGCATAAAAACAATGATACAGCCATGCATAATTACTGTATCA
TGCATATTTTAAAAATTATGCATGGCTGTATCATTGTTTTTATGCTGGAG
TACATAATTATTCAACATGGCTTCCTCTTTAAAAAAGGTCTATTCTCCTG
GGAATAGAACCCCCAAACGATCAAATTAAAACATTGAACCTGCTGAATGT
GTGACGTCATAATTACTGCTTTCAGTTTGCGTGTTTTGAAAGTTTGATGT
GTGTAAGTCCGTCTTGGTGGAATTTTTTAATGGCTTGAAAACAGAATATG
CAATGTCTTTACGAACAAATTTCTAAAAGGGTTTTGTTCTGTAAATATTT
CTTTTTGGATTAAGAAGCTCCATCTTTTATTGTTCTAATGATTATAATAT
TTCTTTATAAGATGATTTGTTGTCTTTTTAATCTTTGTGTAAACTTGCAT
ATGTTTTGCATATTTTCCAACTAAATCCAACCACGGCTTTTTTGTTCCTT
TATTTTTGCATACAATTCAAGATGGCGGATGGAAAGGCGAAAAGGTCTAT
TACATTTGATTTTGTTCGATTAGGATTATGTTCAATGAGTTTGATTGCGA
TTAAAATTAAATTGAGTCACTCCGTTAGAGCTTTTTAGAGTAGTTACTCT
AGGGGCTGAGTTAGGTCTCGTATGCACATCGGGATATAGTCATTTTTTCT
TTTGATCATGAAAGTATAGTCCTTGAAGAGTCAGAAAACGTGTGTGGCGT
TATTTGGATCAGGCACAAATTTCCATAAAACATAAATTTTAAACATAGAC
ATATTATATACCAATCGATCACAAATTTTATGCTGATTAAGAAAAATGTC
AGAACCATGGTCTGTAAATTTCGTTATCTGGAGATATGAAGCACTTTCTA
TTTCGATTTTTTGAAATGACTACTTTTGGTTCCAAATTTGCGTAGCTGTA
ACATTTGATTGGCTTACTTGATTTACTTGAAATTTTCGGAGGGTCTTGCC
TACCGTTCAAATAATAAAATTCAGGAAAAGTTTTTTTCTACATGAATTTC
GAAATCCATAATGGCGGATTCAAAATTTTCTTTCGTCACATCGGCTCTTA
GGCTCTGCTTCCCTAAGAAAAATATTTTTGAGCTTTAAACCCTGCATATT
ATATACCATACCAATCGATCAGAAATTTTATGCTGATTAAGAAAAAGGTC
AGAACTATGGTCTGAAAACTTAGAAAACGTAAATACTTCGTATCTCTTGA
TAACGAAATTTTCAAAATTCTTTTTCAGATACATGGCCGAAAAGAAAAGA
TGGACACTTATCTACAAGTGGAACAACAGCGACGGTAGTTATTCTTAGGC
AAAACAAAGTTTATGTTGCTCATGTGGGAGATTCTGCAGCAGTTATTGCC
CAAAAGAAAAACAATAGATATGTTGCTCAAGAATTAACAGTTGACCATAA
GCCGGAAAGCGTGAAAGAGAAAACAAGGTAA Coding sequence (CDS) from alignment at sc0000452_pilon:80385..85015- >XLOC_034661 ID=XLOC_034661|Name=XLOC_034661|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1008bp|location=Sequence derived from alignment at sc0000452_pilon:80385..85015- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGAAGGGAATACTACCACTGGAAGCTTTGAGAATTTGTCATGATAA
AAATCCTGGAATGCGAAAATATATGGAAGATGAAATTTCGATTGTTCATG
CCCCCAATGATCAAATACCAACTACTTATCTTGGAGTTTTTGATGGTCAT
GGAGGAAAGGAGGCTGCAATATATGCTCGAGACAATTTATTTAAAAATCT
CAAACTTCAACCTGGATTTTTTGATAACGAACCATCAAAAGTAAAGGAGG
CTATTCGAGAAGGCTTCATCAAAACACACATGGATATGTTTCAAATAGTT
GATGCAGAAGGGAATACTACCACTGGAAGCTTTGAGAATTTGTCATGATA
AAAATCCTGGAATGCGAAAATATATGGAAGATGAAATTTCGATTGTTCAT
GCCCCCAATGATCAAATACCAACTACTTATCTTGGAGTTTTTGATGGTCA
TGGAGGAAAGGAGGCTGCAATATATGCTCGAGACAATTTATTTAAAAATC
TCAAACTTCAACCTGGATTTTTTGATAACGAACCATCAAAAGTAAAGGAG
GCTATTCGAGAAGGCTTCATCAAAACACACATGGATATGTTTCAAATAGT
TGATACATGGCCGAAAAGAAAAGATGGACACTTATCTACAAGTGGAACAA
CAGCGACGGTAGTTATTCTTAGGCAAAACAAAGTTTATGTTGCTCATGTG
GGAGATTCTGCAGCAGTTATTGCCCAAAAGAAAAACAATAGATATGTTGC
TCAAGAATTAACAGTTGACCATAAGCCGGAAAGCGTGAAAGAGAAAACAA
GGTAAATACATGGCCGAAAAGAAAAGATGGACACTTATCTACAAGTGGAA
CAACAGCGACGGTAGTTATTCTTAGGCAAAACAAAGTTTATGTTGCTCAT
GTGGGAGATTCTGCAGCAGTTATTGCCCAAAAGAAAAACAATAGATATGT
TGCTCAAGAATTAACAGTTGACCATAAGCCGGAAAGCGTGAAAGAGAAAA
CAAGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000452_pilon | genome | sc0000452_pilon:80385..85015 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 304-504:202 |
| Aaloc | 1-300:4632 |
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