XLOC_034634 (mRNA) -

Overview
NameXLOC_034634
Unique NameXLOC_034634
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000347_pilon:57311..58579+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034634 ID=XLOC_034634|Name=XLOC_034634|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1269bp|location=Sequence derived from alignment at sc0000347_pilon:57311..58579+ (Clytia hemisphaerica_ch_hm2_pilon)
AATCAGGATCAAATGGAAAGCACGCAAGACCAAAAGCCTATCGGGCGCCA TTTAAAGCCACCCTTGTCTTGCCACTCACCAAACAATACCATAAATGAAA GTGACCACCGACCTCTGTTCTCACCAGACGCTATAAGTTCTCCTCACTCA ATGAATGAATTCCCAGTTAGCAAAAACGTTGAAACTCCTTACATGGGTCA AACTCTCACAAACTCGAACCGCTATTTGCGAATTTCCTTTGACGCTTTAG ACGCGTGTACAGACTCTACTCTGGACTCGATTAATCAAATTGTATCAGAC ATCGAGACAAATTATGACGACTTATTGTTGGATTCCCAACAGAGATTACG TCTTCAACCTATACATCATCAAAAAATggctgacatcagcatttttATTG AAAGTGATGATCCTACTACTCCGAATACACAACTGCGGGTCAATGCAGGA TCTTCAGAAGACACAGGTTATCAAACCTCACAAGCCAGCTATTGCGGTAG TAATTCTGAGGTCGATGTATCGTATGATCAAATCAAACTGAAAAACACTG GCAAATATTTTAGAGACCATATCTTTACCCGGGAAGGTTTCCAAGGCTTT CAATGCAACGAGTTTTGTTGTATAACATATATAGAACTTTTATTTGTTTC CTTcgagacaaaagaaaaaggttacCAGTATGGGCGGAGGTTGGATCTTG GGGGCGTATCTACAACTGACGTCTCTACAGATGAAGAGAGTGACCACAAA AAGAGAATTTACAACTACAAACAGAGTAAAAATAAGAGAAACAGGTTCTC CAGTACCCAACCTTCTAGTGCAATGAAACCCTTAAGAAAACTTATGTTAG AGAACACAACAGTTACAGCTTCAGGTTGCCGTGTAAAACGCTACAGCGCA AGAGAGTGCAAAGTCTCTCCAACACAGAGCGGAAATCGCAACCAAACACG ACACATGAAGAGCTATATAGCTTTACGTCAACAATGTCGATTAAATGATG ATTTGTCTCCATTATCCAAACACAAAGGACTTATACCGAACTTAAAATCA CCTCTCGAAACGGCAGGTGCTATACGAAAATCTAAACTGAAACGAAAGAA AGCCTTCAAAGTGTCAAGTGAGACGGATAATATCGGGAAAGCGAGACAAC GTATAATGAGACGGGAAAATCGAGGCAAACGAACATTGAGCAGAGTTGAT ACTTCATCTGACTCATCGAGTTTGTCATCAGCAAACACGTCATGGGACTC ACTTGTTCAGGTATGTTGA

Coding sequence (CDS) from alignment at sc0000347_pilon:57311..58579+

>XLOC_034634 ID=XLOC_034634|Name=XLOC_034634|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000347_pilon:57311..58579+ (Clytia hemisphaerica_ch_hm2_pilon)
AATCAGGATCAAATGGAAAGCACGCAAGACCAAAAGCCTATCGGGCGCCA
TTTAAAGCCACCCTTGTCTTGCCACTCACCAAACAATACCATAAATGAAA
GTGACCACCGACCTCTGTTCTCACCAGACGCTATAAGTTCTCCTCACTCA
ATGAATGAATTCCCAGTTAGCAAAAACGTTGAAACTCCTTACATGGGTCA
AACTCTCACAAACTCGAACCGCTATTTGCGAATTTCCTTTGACGCTTTAG
ACGCGTGTACAGACTCTACTCTGGACTCGATTAATCAAATTGTATCAGAC
ATCGAGACAAATTATGACGACTTATTGTTGGATTCCCAACAGAGATTACG
TCTTCAACCTATACATCATCAAAAAATggctgacatcagcatttttATTG
AAAGTGATGATCCTACTACTCCGAATACACAACTGCGGGTCAATGCAGGA
TCTTCAGAAGACACAGGTTATCAAACCTCACAAGCCAGCTATTGCGGTAG
TAATTCTGAGGTCGATGTATCGTATGATCAAATCAAACTGAAAAACACTG
GCAAATATTTTAGAGACCATATCTTTACCCGGGAAGGTTTCCAAGGCTTT
CAATGCAACGAGTTTTGTTGTATAACATATATAGAACTTTTATTTGTTTC
CTTcgagacaaaagaaaaaggttacCAGTATGGGCGGAGGTTGGATCTTG
GGGGCGTATCTACAACTGACGTCTCTACAGATGAAGAGAGTGACCACAAA
AAGAGAATTTACAACTACAAACAGAGTAAAAATAAGAGAAACAGGTTCTC
CAGTACCCAACCTTCTAGTGCAATGAAACCCTTAAGAAAACTTATGTTAG
AGAACACAACAGTTACAGCTTCAGGTTGCCGTGTAAAACGCTACAGCGCA
AGAGAGTGCAAAGTCTCTCCAACACAGAGCGGAAATCGCAACCAAACACG
ACACATGAAGAGCTATATAGCTTTACGTCAACAATGTCGATTAAATGATG
ATTTGTCTCCATTATCCAAACACAAAGGACTTATACCGAACTTAAAATCA
CCTCTCGAAACGGCAGGTGCTATACGAAAATCTAAACTGAAACGAAAGAA
AGCCTTCAAAGTGTCAAGTGAGACGGATAATATCGGGAAAGCGAGACAAC
GTATAATGAGACGGGAAAATCGAGGCAAACGAACATTGAGCAGAGTTGAT
ACTTCATCTGACTCATCGAGTTTGTCATCAGCAAACACGTCATGGGACTC
ACTTGTTCAGGTATGTTGAAATCAGGATCAAATGGAAAGCACGCAAGACC
AAAAGCCTATCGGGCGCCATTTAAAGCCACCCTTGTCTTGCCACTCACCA
AACAATACCATAAATGAAAGTGACCACCGACCTCTGTTCTCACCAGACGC
TATAAGTTCTCCTCACTCAATGAATGAATTCCCAGTTAGCAAAAACGTTG
AAACTCCTTACATGGGTCAAACTCTCACAAACTCGAACCGCTATTTGCGA
ATTTCCTTTGACGCTTTAGACGCGTGTACAGACTCTACTCTGGACTCGAT
TAATCAAATTGTATCAGACATCGAGACAAATTATGACGACTTATTGTTGG
ATTCCCAACAGAGATTACGTCTTCAACCTATACATCATCAAAAAATggct
gacatcagcatttttATTGAAAGTGATGATCCTACTACTCCGAATACACA
ACTGCGGGTCAATGCAGGATCTTCAGAAGACACAGGTTATCAAACCTCAC
AAGCCAGCTATTGCGGTAGTAATTCTGAGGTCGATGTATCGTATGATCAA
ATCAAACTGAAAAACACTGGCAAATATTTTAGAGACCATATCTTTACCCG
GGAAGGTTTCCAAGGCTTTCAATGCAACGAGTTTTGTTGTATAACATATA
TAGAACTTTTATTTGTTTCCTTcgagacaaaagaaaaaggttacCAGTAT
GGGCGGAGGTTGGATCTTGGGGGCGTATCTACAACTGACGTCTCTACAGA
TGAAGAGAGTGACCACAAAAAGAGAATTTACAACTACAAACAGAGTAAAA
ATAAGAGAAACAGGTTCTCCAGTACCCAACCTTCTAGTGCAATGAAACCC
TTAAGAAAACTTATGTTAGAGAACACAACAGTTACAGCTTCAGGTTGCCG
TGTAAAACGCTACAGCGCAAGAGAGTGCAAAGTCTCTCCAACACAGAGCG
GAAATCGCAACCAAACACGACACATGAAGAGCTATATAGCTTTACGTCAA
CAATGTCGATTAAATGATGATTTGTCTCCATTATCCAAACACAAAGGACT
TATACCGAACTTAAAATCACCTCTCGAAACGGCAGGTGCTATACGAAAAT
CTAAACTGAAACGAAAGAAAGCCTTCAAAGTGTCAAGTGAGACGGATAAT
ATCGGGAAAGCGAGACAACGTATAATGAGACGGGAAAATCGAGGCAAACG
AACATTGAGCAGAGTTGATACTTCATCTGACTCATCGAGTTTGTCATCAG
CAAACACGTCATGGGACTCACTTGTTCAGGTATGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_034634XLOC_034634-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000347_pilongenomesc0000347_pilon:57311..58579 +
Properties
Property NameValue
Aaloc1-1269:1