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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000347_pilon:61981..66670+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034626 ID=XLOC_034626|Name=XLOC_034626|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4690bp|location=Sequence derived from alignment at sc0000347_pilon:61981..66670+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGTGCGCGAATTTTCAATCATGTTGGATTCGAACCGTCAAGTGTT
CTATCCTGGTGAAACAGTAACAGGAAATGTCATTTTAGATTTACAAGGAC
AAATGTCTATGAAGGGAATCACCATTGAATTTGAAGGTATGTTAACTCAA
CTTTTTATCCGATGTTTTGGTAATAAGAAATATTCCGATGCACTAAATGG
AATTAATTATTAGCACAGTTCTCTACAGATTTCGCTTGTCATCCCTATAA
TATTGAAATCTCTTAGCAATCTCCCCTGCGTCTCTTAAATCCACAATGTT
TTGAACTTAAGGTTCGCAAAGGTGACTCAAAACTCAGAAATTAGAATTGT
GAAACAGACTTTATATGCATACCAttttttgtggtcaaaaaatAAAGTGC
TTTCTCGAGTGTATTTTAGCCTAttctagacgtcacccgcgttttttcta
cgcgattaacgtctattccactatgcgacttttttgaatgtttgaagCCC
AGGTTTTTgggtagcctatactagacgtcacccgcaagatgaaaaatccc
ggtttttagtgaggtgctcgctaggtTTTCGGGCTGCAaacattttttga
cgtcacttttaacttgtGAATCCCTAGACGATCCTAttgtctacacaaga
tcactaaaaaagggaatagtttaggagaggcgtgataaattcgggtggag
taagcagtggcggagatgtttacagtgttccaaaactctagcgccacttt
tttcccgtaaaccgccctgacgcccgaattttttcccgcgtttaactgac
ctttaaacggacgatagcatcgtctagtgaATCCCTTGCAGTATAAAaga
atcgaatttgcgtcaaagcacttgaaaggtttcgtttttcagaaaatcgt
caaagtggaattcactaagaaacgagatgaaaaatcccagtTTTTGGTGA
GTTGCTCACTAATGCATTCTAGGCTTTAATTGAATTTAACATATTTGCAC
ACGGtccttttgaaaatgtttaggGTCAGAAACCTAGACTGAAATTTGAC
GCTTTTTTCGTGTCTTTGTGACTAAACCCTTTTTAGTTACAATCTCGACT
TGACCAAGATAAGCAGACTAAACAAACAAATCGttaataaaatctaaatt
tacaTTTATAGTGGAGGAATGGCAGATTCTTCTGTCCCTTATTTCTTTaa
gtattcaaaatattttaccaaTACCACTAGACAACCCTCCGATTCCCGAT
ACTGCCCTCTAGCCCTCTTTCCTCGAAAATAATGTAGGGATTCATTTTTC
AAGTTATGGAACAATCTGTAAATTTCATCAACCTCTAAAGGTATCATTTC
CACATAATGTAGAATTAAGGCTTCCAACTTGAATACTGAGGGCTAATGTC
TGTATGCTTCGTGTTTTATTATCAGGAAAGTCATTTTGCCATTGGACTGA
ACAAACTTGGGAAGGGACTGGTGAAGACAGGCGTCAAGTTACCAAACACA
TCGaagggaaagaaaaatatttcgaaaacaaaacgTGTTTATTTGGTGCC
ATTTCTGGAGGACACACAAGGATCCATCCACACGGTCACTTCAAATATCC
ATTTGTCTTTAACATTCCACAGAGTGTACCAAGCTCCTTTGAAGGAAGTC
ATGGAAGAATCAGATTCGAATTGAAAGGTAGTTATTCCTGAACGTTAAAA
TGACGTCTATCTTACATCCATAACGGGTATATAACGCTAGATgaaaatga
acgttgaaacatgaaagctgaaaattttttctttcggCCTCAAATTGAAT
TGCAGATGCCACCGAACAATTAACTAGCTTgattaaattttaaagaaata
aattgTCCATGTTTTTCCCGTTAAACTACTATTTTAAATTTCCATACTTC
CATATTCCATATTTCCTCAAATTAtttaaatttagattttcaacaGGCTC
CTTAAATAAACTGATAATGCCTGATGGTTTCGTCTATAGTCACTCGTCTT
GACCAAAATAGCAACAGACCTGTTCCATcttatctaaaatatttttgaat
ctaTTTCTAGCCGAGATCGATATTCCAGGAAAACGAGACATCAAAACAAG
ACGACCAATTACAATCAACGAAATTGTCGACACAAATAACCCAAATTATG
GGCAATCTCCAAATGGCCGTTTAACAAAAGAAGTTGGCTGCCTCTGTTGG
AAGGCTGGAAATCTAGATGTCGAAGGTTGgtataaaaaaattcagattta
AGATATCACGTCAAAAATCTTATGTCAGAAAACTTGAATAAACTTCCCTC
TAAAGAATAATGCCATAACTACCAATGAACTGGTTTTAAGGAACAATGAA
TGAAGTTATGAAGCCCCCTATGTACAATGTAGCCCCATCCCTATTCCTAT
TTTCCTAGCCCCACTTTAAAGATCAATAGCTGGCAAAAGTTAGCAAAGTT
CTTCAATACcattaatgttttcttttaagGACATATTGATCGAAAGTGCT
ATTGTCCAGGTGAATTAATTTTGGTCAATTCACAAGTGCAAAACCAAACC
ACAAAGGATATGAAGGCATTAAAAGCGAAATTGTATCAAGATATTCTGTA
CATTGCTGAAGGCCACAAACAGAAACGAGAAAACAAAGTAATTGCCAGAA
TTGACGGTAAGTTGAAAACATTAgaaacaaactttaaaaatcTTATCAGG
GTCTTTTTGATATCTGACAATTTGCTTTCGAACTGCAAAGTAGATCTTTC
CCAAATCTCTGTTCGAAGTATGACGGAAAATGTACCATAAAATTTGAAGA
TAAGACCAAATTATCCAAccaaatgaaaaacaaacaatatgtCATTGTAC
AAATTCTTTCCCACACCAAATtcatcttttcgaccgtagtcgcgcggacA
GGCACGTGCTATTTGATTACTAAATTACCCCCTGAACTTTATCCAGTCCT
TTTTACACCTTTCTCTTTCGTATTCATGTGGGAAAataaatagacgatat
cgcgtttagataaatgcaatgcattctggtttctcggggaccctcaaggg
aattataatctattccagatcattatataattgacattataattcctttg
agagtccccgagaaaccagaatgcattgcatttatctaaacgcgatatcg
tctattgatacaagtttagggtggtaaacaGAAAagtgcccgcgcggcaa
ttggcggctacggtcaaaaaggtgcaTTGTGGGTAATGACGGTATTGTAA
AAGGAAATCCGTTAAAAAGACTATATCATTTACAAACTTTAGGACCACAA
ATACCTCAAGGCAAGAATGAAACATGGAGTAACAGACCTTTGGCTATTCC
AGCCTGTCCCCCATCTATTAGCAAATCATCGATAATCAAAGTCTCTTACA
TGGTTCGTGTGGAGGTTGATGTCCCATGGGGAATCGATCCCAAGATTGAA
ATGCCCATTATTTTGGGTACTGTACCATACAGAGGAACATATGGACAACC
ACAACAATATGGGTTACCACAAGAACAAATGCCTGTGCCAGAAAATAGTA
AGTATATTTGACATTTTAACTCGAACCCAACCCCTTTATAGCTAACTTTA
TTATGATTCACAAAAAGTAGCACGTAGCTCTGGCAACGagattgatattt
tcattgcCTCAAACACTAAGTAGGTAAGTCAAAACATGGAACTACAGAAA
TATTCTGTCAAGCAATATATTTGCGGGTGCAAGCAAAATATTGGTGAGTT
ACAACGATAGAGCACTCAAAATACATATTGAAAAATCGTCCTCGATACAC
CATCAAAGCACAAAGCCAAAGGAGACTGGCTTACATTTTACCACAAAAGA
ATGAAGTCATTGATGTTTCTTAagacattttgacgtcaatcgtacTTGAT
AAACAGCCTCCTCAAAGTCTCTAAAGTTATGATTAAACTGGGGTAATAAT
AatgttcattttattttctctttagaCTTTTCAAACACACCTCAAATGCC
ACCAGCACCATCAAATATGCTTGGTTACCCAGACATGGCTCCCCCTGCTT
ATGCAGCAGCTGTTGGGAGTAGTCGAGTCAATGTTCATCAAGATGACAAC
AGTGAATTAATGGGAAACTCTATGTACATCCCTGTTTACACATTTGCTGC
ACCTTACAAGGTAAGTATTCTTTCCACTGGATAAAAGACCaaaaaaaCTT
GCCTATTGGAATAATTACTTTCAGAGATCTTATCACCATTtcggaaaaaa
actttcagactCTCGATGACTGATTTAGATTTATCATGCAAACAACGAAT
CGCTTAATATTCTAGCAGCCATAAAGTTGTATGCTTTACTTTATTCCCTA
TACTGTCCATTGATGTAAGTTTCTCTGAACGAAGTGAGACAGGGATATTT
GATAAGACGCAATTTTAAAAGCCGAAATCACGAGACTAACTATTTATTTA
CTTTAGGGCTCTATGAAGATTGAACAGGGTAGCATGAACCCACAACAGCC
AACAGCACCACCTGCAGGGTATCCCCCTCAACAGCCAGGTTACCCACCTG
TCCAACCTGGCTACCCACCCACACAACCAGGCTACCCCCCACAACAACCT
AATAACCTGATTGGTTTCGATGGCTCTGCTTATCCAGCTGCGCACCCTGG
CTATCAACCACAACCTGGAATGGCTGCTGGACCATACTGA Coding sequence (CDS) from alignment at sc0000347_pilon:61981..66670+ >XLOC_034626 ID=XLOC_034626|Name=XLOC_034626|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2808bp|location=Sequence derived from alignment at sc0000347_pilon:61981..66670+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGTGCGCGAATTTTCAATCATGTTGGATTCGAACCGTCAAGTGTT
CTATCCTGGTGAAACAGTAACAGGAAATGTCATTTTAGATTTACAAGGAC
AAATGTCTATGAAGGGAATCACCATTGAATTTGAAGATGGGTGTGCGCGA
ATTTTCAATCATGTTGGATTCGAACCGTCAAGTGTTCTATCCTGGTGAAA
CAGTAACAGGAAATGTCATTTTAGATTTACAAGGACAAATGTCTATGAAG
GGAATCACCATTGAATTTGAAGGAAAGTCATTTTGCCATTGGACTGAACA
AACTTGGGAAGGGACTGGTGAAGACAGGCGTCAAGTTACCAAACACATCG
aagggaaagaaaaatatttcgaaaacaaaacgTGTTTATTTGGTGCCATT
TCTGGAGGACACACAAGGATCCATCCACACGGTCACTTCAAATATCCATT
TGTCTTTAACATTCCACAGAGTGTACCAAGCTCCTTTGAAGGAAGTCATG
GAAGAATCAGATTCGAATTGAAAGGAAAGTCATTTTGCCATTGGACTGAA
CAAACTTGGGAAGGGACTGGTGAAGACAGGCGTCAAGTTACCAAACACAT
CGaagggaaagaaaaatatttcgaaaacaaaacgTGTTTATTTGGTGCCA
TTTCTGGAGGACACACAAGGATCCATCCACACGGTCACTTCAAATATCCA
TTTGTCTTTAACATTCCACAGAGTGTACCAAGCTCCTTTGAAGGAAGTCA
TGGAAGAATCAGATTCGAATTGAAAGCCGAGATCGATATTCCAGGAAAAC
GAGACATCAAAACAAGACGACCAATTACAATCAACGAAATTGTCGACACA
AATAACCCAAATTATGGGCAATCTCCAAATGGCCGTTTAACAAAAGAAGT
TGGCTGCCTCTGTTGGAAGGCTGGAAATCTAGATGTCGAAGCCGAGATCG
ATATTCCAGGAAAACGAGACATCAAAACAAGACGACCAATTACAATCAAC
GAAATTGTCGACACAAATAACCCAAATTATGGGCAATCTCCAAATGGCCG
TTTAACAAAAGAAGTTGGCTGCCTCTGTTGGAAGGCTGGAAATCTAGATG
TCGAAGGACATATTGATCGAAAGTGCTATTGTCCAGGTGAATTAATTTTG
GTCAATTCACAAGTGCAAAACCAAACCACAAAGGATATGAAGGCATTAAA
AGCGAAATTGTATCAAGATATTCTGTACATTGCTGAAGGCCACAAACAGA
AACGAGAAAACAAAGTAATTGCCAGAATTGACGGACATATTGATCGAAAG
TGCTATTGTCCAGGTGAATTAATTTTGGTCAATTCACAAGTGCAAAACCA
AACCACAAAGGATATGAAGGCATTAAAAGCGAAATTGTATCAAGATATTC
TGTACATTGCTGAAGGCCACAAACAGAAACGAGAAAACAAAGTAATTGCC
AGAATTGACGGACCACAAATACCTCAAGGCAAGAATGAAACATGGAGTAA
CAGACCTTTGGCTATTCCAGCCTGTCCCCCATCTATTAGCAAATCATCGA
TAATCAAAGTCTCTTACATGGTTCGTGTGGAGGTTGATGTCCCATGGGGA
ATCGATCCCAAGATTGAAATGCCCATTATTTTGGGTACTGTACCATACAG
AGGAACATATGGACAACCACAACAATATGGGTTACCACAAGAACAAATGC
CTGTGCCAGAAAATAGACCACAAATACCTCAAGGCAAGAATGAAACATGG
AGTAACAGACCTTTGGCTATTCCAGCCTGTCCCCCATCTATTAGCAAATC
ATCGATAATCAAAGTCTCTTACATGGTTCGTGTGGAGGTTGATGTCCCAT
GGGGAATCGATCCCAAGATTGAAATGCCCATTATTTTGGGTACTGTACCA
TACAGAGGAACATATGGACAACCACAACAATATGGGTTACCACAAGAACA
AATGCCTGTGCCAGAAAATAaCTTTTCAAACACACCTCAAATGCCACCAG
CACCATCAAATATGCTTGGTTACCCAGACATGGCTCCCCCTGCTTATGCA
GCAGCTGTTGGGAGTAGTCGAGTCAATGTTCATCAAGATGACAACAGTGA
ATTAATGGGAAACTCTATGTACATCCCTGTTTACACATTTGCTGCACCTT
ACAAGaCTTTTCAAACACACCTCAAATGCCACCAGCACCATCAAATATGC
TTGGTTACCCAGACATGGCTCCCCCTGCTTATGCAGCAGCTGTTGGGAGT
AGTCGAGTCAATGTTCATCAAGATGACAACAGTGAATTAATGGGAAACTC
TATGTACATCCCTGTTTACACATTTGCTGCACCTTACAAGGGCTCTATGA
AGATTGAACAGGGTAGCATGAACCCACAACAGCCAACAGCACCACCTGCA
GGGTATCCCCCTCAACAGCCAGGTTACCCACCTGTCCAACCTGGCTACCC
ACCCACACAACCAGGCTACCCCCCACAACAACCTAATAACCTGATTGGTT
TCGATGGCTCTGCTTATCCAGCTGCGCACCCTGGCTATCAACCACAACCT
GGAATGGCTGCTGGACCATACTGAGGCTCTATGAAGATTGAACAGGGTAG
CATGAACCCACAACAGCCAACAGCACCACCTGCAGGGTATCCCCCTCAAC
AGCCAGGTTACCCACCTGTCCAACCTGGCTACCCACCCACACAACCAGGC
TACCCCCCACAACAACCTAATAACCTGATTGGTTTCGATGGCTCTGCTTA
TCCAGCTGCGCACCCTGGCTATCAACCACAACCTGGAATGGCTGCTGGAC
CATACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000347_pilon | genome | sc0000347_pilon:61981..66670 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1171-1404:4457 |
| Aaloc | 988-1170:3978 |
| Aaloc | 733-984:3295 |
| Aaloc | 556-729:2482 |
| Aaloc | 391-552:2063 |
| Aaloc | 139-387:1428 |
| Aaloc | 1-135:1 |
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