|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000351_pilon:40003..46524- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034603 ID=XLOC_034603|Name=XLOC_034603|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6522bp|location=Sequence derived from alignment at sc0000351_pilon:40003..46524- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAAAATAATCCGTCAACAGCAGACTATTCAACGAGCTCTTCGAGA
AGCAAAATATTCACGCAGAAATTACTCCAGACTGGCACAGCAGACGAATC
AGCTGCGTGCAACTCCGACGAACCATGGAGCTCTTAGAGCAGGTAATGAT
AATTCTTTCTCTTTAGAAATCTTCCAAACAACGAATAGGAATTTTTCATT
CAAATTTTAAAAGTAAAAGTTCTGATACCGTATTTTGAATATCATAATGG
TTTTCAGGCATCCGTCGCATGGCAACAAGTGGTTCCAGTGGAGGTGGAAA
TGACGCCATGTTGATTGCAGCAGGAATGGGAATCCTTGGTGCCACCGGAA
TGATGGTAAGTCTTCCTTTTTAAATTTTCTTCGATTATTGCAACAACGTT
TTTTTAACTTCGACTGCAGTCGAACAATGATGATGACGATAAAAACTCTA
ACATTTTTATACCCTCCTTTTTAAATGAGACATTACCTCCATGTCAACCT
TTCGGAAAAATATTAAACTTTTGATCAATCGGTATATATCGAAAGGTTTC
TCCAAGATAGAGGTTTTAAGTGAGTTTAAAATATTCCACAAAGTAGTACT
CTTACATTTATCTAACCAGTGTTCAGATAACGTTAATAGCGTTCATGTTA
ATGTTAAAGATAATGTTACTTTTTTGAACACTAACGAAGTACTTTCATAA
TTACTCAAATCAACGACATCGAACTGCATATCATGATTGTTTTGGACTTT
TTCCATCTCAGGGTTATTACATGACAAATACCGAATACGAGGGTCCAAGA
GATGTCAAAGAACCTGAACCTGTTGCTGAAGTCGAAGAGGTTTGGTATTG
CTTTCTTTATTTTCAAAGGAGCCTCTTTTCATATTACTATTGGTTAGGTA
GATGTTTGCCCAGTAATGTCTCATGGTATTATTATCAGGTTTGTGTAAAG
TCTGGTCAACAAGGTTTGACTTATAAAGGCTTCTTTACTACACGCTTTTT
TATAAAAGCACGCAGCTGAAAATTTGCCGAAACTTTTGAACAAATTAAGA
ACAATCCTAAGCCTCAGGTTTCTGAAATTACTGAAAATTTCAAAAAATTG
AGAACAGCCCAAAAAAGTGTGTACTACTAACTACTCATGGACGTCAATAA
AGCCTATCTTCAACCTTAGAATTGTTTTTATAGGAAGTGGCCGAAGCACC
AGAAGAAGCTGCTACCGAAGAGGCTGCTACCGAAGAGGCTGCCACAGAAG
AGGCTGCTACCGAAGAGGCTGCCACAGAAGAAGCTGGCACAGAAGAAGCT
GCTACCTCTACTGACCAAGAACAAACACCTACCGAAGTTGTTGAAACACC
TGAAACTTCCTCTGAAGAAATCGTGGAAGGTTGATTTACTATTTAAATTT
TTTATTTCGAACATTTCGGTCTAATTTTTTGGGTCTTACAACATTGAATC
CTGTTAGATATTTTCTTGTCTCTGATTAGAAAAATTACACTCACTTCTTT
GAAATAATATGTCATTTTTCACATTCAGAGCCGTCAACCCCTCTTCGTAA
ATATCCCGAAGAAGCTACATACGTCATCATTGGTGCAGGCACGGCTGCTC
ATGCGGCTTGTAGAGCCATTAGGAAGAAGGATAAAACAGCAAAGGTAAAG
TTCGTTTGAAAGCTTTCCCCACGTTTCCCAATCTACCGATGGACTCGCCT
TGTTTATGGAATTCATTATGGGGATTCGGTTGAAAAAGTTTGTTGCATAT
TGTCTCTTTAGTTATTTTGTTGGTTTCAGAAGGATAAATGTAATCTCTGT
TATACAAAGTGCTCTATACCAGAAAACAAGCTGATTAGAGTCTACATTTA
TTTGTCAACAAGTAAAAAAATACATTACTTATTAGTCGATTTCATTGATT
AGAGAAAGTGGTCAAAAATGAAACATTTCAACCTTTGTTTACAGATTCTG
ATCATCGGTGAAGAGAATGCGTTGCCATACATGAGGCCACCTCTTTCAAA
GGAGTTATGGTTCAGTGAAGATGAGAAGGTCACCGAAACATTGAAGTTCA
AGTCATGGAATGGTAAAGAACGCAGGTTAGATCTTCATGCAGTCAGTGAT
CTGTTATTAGTTTCTTTAGAATGCAACTACTTGCTGTCATTGTTTTTTTT
GACTGTTTTTGACAAAACACTTGAATCAATAGTTTCAATAGACGATATCG
GCTTTCTGAATTCTCCCCGAATGATTACCCATGATGCATTGTTAGGGTTT
GGGTTATCGTCCGTGAATTTTTTTGCGCAATGCATCATGGGTAATCATTC
GGGGAGAATTCGGTAAAGTCGATATCGTCTATTTACTGTACGCAGATTGA
ACGTATAATAGGTCATGATTTGCATAACAAAGTCTTTCCAGCGCTTGGGG
TAAATAAGTAAATTTAAAAAGGCAGGTTTGATTGCAGAACTGTTGAAAAC
AATATACTTTTTAAATCTTTGCAAATGGTAGGCACGAGAACAGTTTCCTT
TCCTACGATGGTAGGATCGATTTGTGTATGATCTTCGAGCAGATTCTGAT
TACTCCACTCTGGAACGCATTCACTCTAAAGGCAATGGCTCCTTAAGAGA
GCCTGCCCAGGCTGGCGCACCGCTTTGATCTTTTTCATCTAGATTTGAGA
TGAATATCAAAGGAGCGCGGTGACTGGTTAAAGCAAAACAATCGAACCAA
AATTGAATGCCGATCACAAACATAAACATTAGAACCCAGTCGCTCTCGCT
TTCGTTTTCGTTTTCAAGCAAAAAGCAATGCGGTTTTCGAATGTTTTAAC
TTGACAATCAGTTCAGATCTTCTCATTCGCAATATCCCTTTAGAGCAGAG
CGTGGTATGCTCAAAATGGATGATCTGTTACGAGATTAGTTTGTGTATAA
TATTTGATCACTTCAATTTCAGTGTCTTCTTCGAAGGTGAAGATTATTAC
ACTAAAGTAGAAGATTTCAATGAAGGCGATCGAGCTCTTTCCGTTATTAC
TGGCGAAAAGGTAAACCTATCTCAGTTTGTAAACCCTTTTACCTTCCTTT
GTCATCGAAGTTGGCAGTACACGTCTTGTCTACTCTCATTCACCACAGGA
TAACAAATCATATTTTTTAATGATGAATGATTAATGCCATGCAAAGTAAT
GTTCGATAAAAATCAAGAAAACAAAAATTTTGTTTACTGTACTGACGATG
ACGATAGTCGAAAAGCTTTTACAATAAATTGAACAAAATTTTTGTTTTCT
TGATTTTTATCGAACATATTTTTTAATATTATGATTCTTTTTTTAAGGTC
GTTCAAGTGAATCCTGAATTTCATGAAGTGACTTTGGCGAGTGGAGAAAG
TATCAAATATGGAAAACTACTCATAGCAACAGGTTCCCAGCATATCATGT
TTCTTTGTTTCAAGCTGTGTTCTGTTAGCGAACTTTTTGAGGTTTAACTC
TTTTCTTGGTCTCTTTGATTCAAATTTTTGTCTAAATATTTTGCATGTTA
TTTTTTTCTTCCAGGTGGAACTCCACGTGGGCTCAGCGTTTTCGATACTC
AAGGCGTCAAAGATAAATTAACTCTCTTCAGAAATGTAAGATCTTTCTTT
TTGTCTTCGAAAATCATATTATTTGCGATTTAGGCCAGTAAGGATTTGTT
TGTTTATTTACTGAATTCTCTTGGTTACCATACAACTGTCTTTCGAGGTT
TCTCTTCCATCTACTTTCTCTTCCTTTACAGATAGCAGACTTCCAGAGTT
TGACATCAGCAGTGAGTGAAGCAGAGCATGTGGCCGTTGTTGGTGGAGGT
TTCTTAGGAAGTGAATTAGCATGTGCCCTCGCCTCCCATGGTAGGTCCTT
CATATTCTGATTTAATGATAAGGGAAAGCTTGCAATTGCGGTATAATTAT
TCACTTGCAATAACAGTTTAAATGTTAATTTATACTCACGATACACGCAA
GAAGTAGAAGTTAAAATTCAAATGGATTTCGCACTGTTCTCAATGCAAAA
ATGTAAGGCCATGCCTGGTGATTTCGGTCCACACTAAGATAGTCCCTCGG
GGATCGTTAATTTTTTTGGACGATAACTGAAAAAGGTTTTTACACGTTCG
CTGCTGCCAACTGCGAGTATACTCGTAGTAGAGTGATTAAAATATCGGCA
GTACTTCAAAGAGCCATACATTTTGATACAGAAACTAACATATTTTTATT
GCATTTTTGGAATCTACGTAAAATTTTGCATTGATTGGAATACAATTTGA
AAGTATTTAAAGCAAAATTTAGGCCACAGGACACTCTGAAAGCTGCTGAA
AGTCAAACTTTTGATAAAATTTCAAGAGGATGAAATTTCGATTTCTGAAA
ATGGCTTGTCAGCGAACGTGTCAAGGAGAAAGAAGTCAATAGAGAGGAAT
TTATACATTTTATGAGGGACTTAAAAGGGCTTTAAGAACTATCACATCTA
TCACATCTTTTACCATTCAGGCAAGAAAAAAGGACTGAAGGTGACACAAA
TTTACCCAGAAGAAGGAAATATGGCGAAGGTGCTTCCCAAGTACCTCAGT
GACTGGACCACAAATAAAGTCAAAAATGGTAAGCTCGTTGCAAATGTCTC
TTGTTCATATCTTCTGCCATAAGTAATATAACTCAAAATTGGGCTGATGT
TTCAGACTAGCTTTTTTAATGAGGTGGATTAAATAACCTTTGGATAATTT
TCGTATATAAAGAACAACTTTACACATCACACTGTCCTGTATGATTCCTT
AATCTCTCGCCAATCACTCATCATTTTAGAGGGCGTCAATATATTATCGA
AGAGTTCAGTGAAAGAGACCTCAAGCGAAGGAAAACAAGTCAAGTTGACA
TTGGATAGTGGTGAAGAAGTAAGAAAGCTGTCCTTAATCTGAGAATCTCT
AATCACAGATAAACTCGAATTTACCATGGCAAATTCTTCCAATTTAGGCT
TAGTACGATTCCACTGTTCTAAGAGCAATGAAGTACTTCTTTAATCGGAT
TAATTTTCACGAGAATTTATTTCGTGTGCTAAAAAATCGCGAAAGTTTCG
GCATTTTCAAATACTTTGCGTGGATTTATTTCCGCGAATCAGCCAAAATC
AGTTAAGAATAGTCTTGAAAACGTCAATTTTTGTCACATTTGGATTTACA
GATAATTTTAAGCCGATTATCTGATCGTGAAAATTTCGCGCGGATTTAAT
ATCGAGAGTCAGCAATCTCACATACAATTGCGATTTTTTTTTCTCTCTTC
TTTTTCATTCAGGCGTTGGCAGACCATGTTGTTGTATGCGTGGGCCTTCA
ACCCAATGTGGAACTTGCAAAATCTGCTGGTCTGGAGGTGGATTCACAAC
AAGGGGGTTTCAGAGTCAATTCAGAATTAGAAGCAAGATCTGATATCTGG
GTGGTAAGTCACCCCCTTTCAACATGGTTTATTTGTTATTTGCTACCTCT
TGGGACTGGGTTTTACCCTAAGATAAATCAAAGTTAGCGTCGTTGAGGAG
GATTTGCGAAATAATTATTATGTTTCAGCGATCTCTCTAAAGCATCCTGT
CAAGCCAAATAATTTAGTTTGGACCAATTAAAATTAGTTTTGACTTCAAA
CTTTTTTCTTCATTAGGCTGGAGATGCTGCTTGTTTCTACGACATCAACT
TGGGACGTCGCCGAGTAGAACATCACGATCACGCTGTCGTCAGTGGAAGA
TTAGCTGGTGAAAATATGACGGGTGCCAAAAAGAGTTATCAACATCAATC
CATGTTTTGGTTGGTTAATTTCTCCTCCCCAGTTCTCTTGTGTCGCGTGC
TACTTGTGCCTTTCTTTTTTAAATGAATAAATGTTTGTTTGTTTGTTCAA
TGTTTGTTCAAAAGCTGTATTTTGTTCAACCAATTGTTTCCCAATTATTT
TAGGAGTGATTTAGGTCCAGAGGTAGGATACGAAGCAATTGGTGTATGTG
ATAGTTCATTGCCCACTGTTGGTTTTTGGGCCAAAGCCACAGCCAGTGAC
ACACCAAAAGGTTCTGAAGAAGCTACTGGTGAAAGCGTACGCTCTGATGC
GGAATCAGAAAATGTCGTAAGTGCTCTTATGTTCGTGTGTTAGTATTATT
TTACGCAAAAACCTGGAAACTACGTTGAAAGTTTGGTAATTAGTCGCTCG
CTATCTAAATTTTTTGTAAGTGTATCATTGACAAGAGTTGGTCGCTTAAT
GTACGTCTTATAGCTGGCCTGGTTTCCGTGAGAATCTAGTTCACCTGCTT
AGGAAAGAATCTAATAATTTTTTCTTTCCTCTATTCTATCAAAGGCACAA
AGTGAAGGTAGCGCAGTCGCAGTGGAAACACCGGCAGCACAAACTGAGGG
ATCTGAAGAATCGTTTGGGAAAGGAATTGTTTTTTATACACGTGAAAAGA
AGGTGGTTGGTATTTTATTATGGAACATTTTCAGTCAAATGCCCATTGCA
AGGAAGATCGTTACTGAGGGAAAAGACCATGACGATTTCAACGCCCTCGT
TAAAGCATTCAAATTACACTGA Coding sequence (CDS) from alignment at sc0000351_pilon:40003..46524- >XLOC_034603 ID=XLOC_034603|Name=XLOC_034603|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3882bp|location=Sequence derived from alignment at sc0000351_pilon:40003..46524- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAAAATAATCCGTCAACAGCAGACTATTCAACGAGCTCTTCGAGA
AGCAAAATATTCACGCAGAAATTACTCCAGACTGGCACAGCAGACGAATC
AGCTGCGTGCAACTCCGACGAACCATGGAGCTCTTAGAGCAGATGTATAA
AATAATCCGTCAACAGCAGACTATTCAACGAGCTCTTCGAGAAGCAAAAT
ATTCACGCAGAAATTACTCCAGACTGGCACAGCAGACGAATCAGCTGCGT
GCAACTCCGACGAACCATGGAGCTCTTAGAGCAGGCATCCGTCGCATGGC
AACAAGTGGTTCCAGTGGAGGTGGAAATGACGCCATGTTGATTGCAGCAG
GAATGGGAATCCTTGGTGCCACCGGAATGATGGCATCCGTCGCATGGCAA
CAAGTGGTTCCAGTGGAGGTGGAAATGACGCCATGTTGATTGCAGCAGGA
ATGGGAATCCTTGGTGCCACCGGAATGATGGGTTATTACATGACAAATAC
CGAATACGAGGGTCCAAGAGATGTCAAAGAACCTGAACCTGTTGCTGAAG
TCGAAGAGGGTTATTACATGACAAATACCGAATACGAGGGTCCAAGAGAT
GTCAAAGAACCTGAACCTGTTGCTGAAGTCGAAGAGGAAGTGGCCGAAGC
ACCAGAAGAAGCTGCTACCGAAGAGGCTGCTACCGAAGAGGCTGCCACAG
GAAGTGGCCGAAGCACCAGAAGAAGCTGCTACCGAAGAGGCTGCTACCGA
AGAGGCTGCCACAGAAGAAGCTGCTACCTCTACTGACCAAGAACAAACAC
CTACCGAAGTTGTTGAAACACCTGAAACTTCCTCTGAAGAAATCGTGGAA
GAAGAAGCTGCTACCTCTACTGACCAAGAACAAACACCTACCGAAGTTGT
TGAAACACCTGAAACTTCCTCTGAAGAAATCGTGGAAGAGCCGTCAACCC
CTCTTCGTAAATATCCCGAAGAAGCTACATACGTCATCATTGGTGCAGGC
ACGGCTGCTCATGCGGCTTGTAGAGCCATTAGGAAGAAGGATAAAACAGC
AAAGAGCCGTCAACCCCTCTTCGTAAATATCCCGAAGAAGCTACATACGT
CATCATTGGTGCAGGCACGGCTGCTCATGCGGCTTGTAGAGCCATTAGGA
AGAAGGATAAAACAGCAAAGATTCTGATCATCGGTGAAGAGAATGCGTTG
CCATACATGAGGCCACCTCTTTCAAAGGAGTTATGGTTCAGTGAAGATGA
GAAGGTCACCGAAACATTGAAGTTCAAGTCATGGAATGGTAAAGAACGCA
GATTCTGATCATCGGTGAAGAGAATGCGTTGCCATACATGAGGCCACCTC
TTTCAAAGGAGTTATGGTTCAGTGAAGATGAGAAGGTCACCGAAACATTG
AAGTTCAAGTCATGGAATGGTAAAGAACGCAGTGTCTTCTTCGAAGGTGA
AGATTATTACACTAAAGTAGAAGATTTCAATGAAGGCGATCGAGCTCTTT
CCGTTATTACTGGCGAAAAGTGTCTTCTTCGAAGGTGAAGATTATTACAC
TAAAGTAGAAGATTTCAATGAAGGCGATCGAGCTCTTTCCGTTATTACTG
GCGAAAAGGTCGTTCAAGTGAATCCTGAATTTCATGAAGTGACTTTGGCG
AGTGGAGAAAGTATCAAATATGGAAAACTACTCATAGCAACAGGTCGTTC
AAGTGAATCCTGAATTTCATGAAGTGACTTTGGCGAGTGGAGAAAGTATC
AAATATGGAAAACTACTCATAGCAACAGGTGGAACTCCACGTGGGCTCAG
CGTTTTCGATACTCAAGGCGTCAAAGATAAATTAACTCTCTTCAGAAATG
TGGAACTCCACGTGGGCTCAGCGTTTTCGATACTCAAGGCGTCAAAGATA
AATTAACTCTCTTCAGAAATATAGCAGACTTCCAGAGTTTGACATCAGCA
GTGAGTGAAGCAGAGCATGTGGCCGTTGTTGGTGGAGGTTTCTTAGGAAG
TGAATTAGCATGTGCCCTCGCCTCCCATGATAGCAGACTTCCAGAGTTTG
ACATCAGCAGTGAGTGAAGCAGAGCATGTGGCCGTTGTTGGTGGAGGTTT
CTTAGGAAGTGAATTAGCATGTGCCCTCGCCTCCCATGGCAAGAAAAAAG
GACTGAAGGTGACACAAATTTACCCAGAAGAAGGAAATATGGCGAAGGTG
CTTCCCAAGTACCTCAGTGACTGGACCACAAATAAAGTCAAAAATGGCAA
GAAAAAAGGACTGAAGGTGACACAAATTTACCCAGAAGAAGGAAATATGG
CGAAGGTGCTTCCCAAGTACCTCAGTGACTGGACCACAAATAAAGTCAAA
AATGAGGGCGTCAATATATTATCGAAGAGTTCAGTGAAAGAGACCTCAAG
CGAAGGAAAACAAGTCAAGTTGACATTGGATAGTGGTGAAGAAAGGGCGT
CAATATATTATCGAAGAGTTCAGTGAAAGAGACCTCAAGCGAAGGAAAAC
AAGTCAAGTTGACATTGGATAGTGGTGAAGAAGCGTTGGCAGACCATGTT
GTTGTATGCGTGGGCCTTCAACCCAATGTGGAACTTGCAAAATCTGCTGG
TCTGGAGGTGGATTCACAACAAGGGGGTTTCAGAGTCAATTCAGAATTAG
AAGCAAGATCTGATATCTGGGTGGCGTTGGCAGACCATGTTGTTGTATGC
GTGGGCCTTCAACCCAATGTGGAACTTGCAAAATCTGCTGGTCTGGAGGT
GGATTCACAACAAGGGGGTTTCAGAGTCAATTCAGAATTAGAAGCAAGAT
CTGATATCTGGGTGGCTGGAGATGCTGCTTGTTTCTACGACATCAACTTG
GGACGTCGCCGAGTAGAACATCACGATCACGCTGTCGTCAGTGGAAGATT
AGCTGGTGAAAATATGACGGGTGCCAAAAAGAGTTATCAACATCAATCCA
TGTTTTGGCTGGAGATGCTGCTTGTTTCTACGACATCAACTTGGGACGTC
GCCGAGTAGAACATCACGATCACGCTGTCGTCAGTGGAAGATTAGCTGGT
GAAAATATGACGGGTGCCAAAAAGAGTTATCAACATCAATCCATGTTTTG
GAGTGATTTAGGTCCAGAGGTAGGATACGAAGCAATTGGTGTATGTGATA
GTTCATTGCCCACTGTTGGTTTTTGGGCCAAAGCCACAGCCAGTGACACA
CCAAAAGGTTCTGAAGAAGCTACTGGTGAAAGCGTACGCTCTGATGCGGA
ATCAGAAAATGTCGAGTGATTTAGGTCCAGAGGTAGGATACGAAGCAATT
GGTGTATGTGATAGTTCATTGCCCACTGTTGGTTTTTGGGCCAAAGCCAC
AGCCAGTGACACACCAAAAGGTTCTGAAGAAGCTACTGGTGAAAGCGTAC
GCTCTGATGCGGAATCAGAAAATGTCGCACAAAGTGAAGGTAGCGCAGTC
GCAGTGGAAACACCGGCAGCACAAACTGAGGGATCTGAAGAATCGTTTGG
GAAAGGAATTGTTTTTTATACACGTGAAAAGAAGGTGGTTGGTATTTTAT
TATGGAACATTTTCAGTCAAATGCCCATTGCAAGGAAGATCGTTACTGAG
GGAAAAGACCATGACGATTTCAACGCCCTCGTTAAAGCATTCAAATTACA
CTGAGCACAAAGTGAAGGTAGCGCAGTCGCAGTGGAAACACCGGCAGCAC
AAACTGAGGGATCTGAAGAATCGTTTGGGAAAGGAATTGTTTTTTATACA
CGTGAAAAGAAGGTGGTTGGTATTTTATTATGGAACATTTTCAGTCAAAT
GCCCATTGCAAGGAAGATCGTTACTGAGGGAAAAGACCATGACGATTTCA
ACGCCCTCGTTAAAGCATTCAAATTACACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000351_pilon | genome | sc0000351_pilon:40003..46524 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1714-1941:229 |
| Aaloc | 1552-1713:619 |
| Aaloc | 1408-1548:907 |
| Aaloc | 1267-1407:1261 |
| Aaloc | 1180-1266:1742 |
| Aaloc | 1072-1176:2051 |
| Aaloc | 961-1068:2792 |
| Aaloc | 892-960:3007 |
| Aaloc | 805-888:3226 |
| Aaloc | 718-804:3600 |
| Aaloc | 586-714:4579 |
| Aaloc | 472-585:4993 |
| Aaloc | 385-468:5229 |
| Aaloc | 319-381:5340 |
| Aaloc | 241-318:5762 |
| Aaloc | 145-240:6264 |
| Aaloc | 1-141:6523 |
|
