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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000154_pilon:771654..774408+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034590 ID=XLOC_034590|Name=XLOC_034590|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2755bp|location=Sequence derived from alignment at sc0000154_pilon:771654..774408+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTTTCATCACACTTGCTGCACCAGAAGTTTTCCACAGTCCTGATGATTT
GAATGTTGGAATTTATGGTTTGGAAGGATCGAAACCTGGAGCTGCAGCCT
GTGGCGTTCTTTTGTCTCACCGGGTAAGATCATCAATACACCCCCTCTCA
CAGACCctgtagaattttttcagccagtggggataaaaataacggaatgA
AATTCATGGCTGGGGATATATTCATATTCTtctgttttcaagtcagaaaa
ttgggtggcgatgggaaaaatagcataatatatTCCAGTatgattgattt
atttgattaaattcagtggggacaaaagttgtaggataattttccaccta
gggcgatattttggccaattttttcagtgggatgGGTTCTCAGTGTGTCT
GTGATAAGGGGGTGTAATAATCCAAAAGTACCCTCAGTAATCAAGCGAGA
AAaATGTTTGAATAATttgaGAAACCAACAAATCTGGCCGACCAAAAAGA
CAATTTGAGATGTCTTCAGTGGAAGAAGCACTAATGTTTCCCGAATTTTT
GTCTTAGTGCTTTATATCGTCGAGGGAACCCTTTAGGATTGTTATGGGTA
AGGACGATAGTATTCTCACAGAACGGCAATCCCAATTTTATAATCAGGTC
TAGTTTGGGTTCCAAATATTCAAAGGGagaaataaatgaaaagaaCTATA
TTATTTTAACGTAAGCACACTTATGATCACAAGAAAAATGGTTCTAGAGA
CATAGTTCGACTCTCTAGGTCGTTGGATTGGATCAAAACGGTTACGGTCG
TATTCTTGGCCAATGTCAACTTGGTGCAAAACTTTTCTACAGCATGTGGG
AAACAGTCGCCAGAGATGATGATCCTTTCATTTGCTGCAACTTCATTCCA
CTCGATTTGAAAGAATTACAAGAAAAAGGATTCTCGTTCAAAACACAACA
AGATGTCCATGACTACATCAAGAAACATATTATCGGTAAACCAAATGAAC
AACTTGTCAAGAATGTTCACAAAGAAATCGATTTCTTGGGAATCGTTGGT
CCTGACGCTTTGATCAATTCGTTCACCGTCAACTGTAAGGGTCAAAGCAC
TGGTAAAGGTCAACAAAATATCGAGTTGGTCAACGATTTGCAAAATCTTG
TCTTCAATGAATTAACTTGTAAGTGTTTCAGTCTAGTCCCCtatctttca
aattctaaaATGCACATTTTCTTTATTACTGTCATTTGAAGTTATCTAGG
ACTGAAACTTTTCACGGTATGTTAAACCGTGACGGGTGTTAACCTGTGAA
GATAATTCACATTCCACTAAGTGTATTTGCTATTCTTTCAGCGAGTGTTG
GCGAAGACACTAAACGGGTCAAGATGTTTTTGACAACCTCAAAACTGGAA
TATGCAAATTATGGGAAATCCGTCCAACAATTGAAGGAGAGATTGAATTT
ACCGACCGAAAATACCCATGATGCACTTGGATTCTCGCTTGGATTCTTGA
GGAACACTTGTATGGAACCATATCAAGCAAGCGAAGCTTATGTGGAAGTT
CTTGGTGATTTATTCAGAAAGACTGTTCTCACTTGCATTGGTGCTGTAAG
TATCAGATATTTATCTTAGCATCCCCATGAACTATTAAGGTTAATtccta
aaaaaaacgttttgtaCCTTACATGAGGCTTAAACAGAAATATTTTGCAC
TACACTACCTTTTTTACTAGTgaggaaaatgagaaaattaatCCATGACC
GTTGATTAGTCCTTGGTCAAACGGAAGTCAAACAATTGCTAAAAGattta
gatttcaaaatgaaaaaaatagatttaaCGCTTTTTGAGATGGGTAATGG
CTTTTTTGAAGTAACATAACGCTTATTTTCTCTCATATACCACAGTAACA
AATCATAGATAAATCTCTATTATGAATCGTTTAACCTTCCTGATTTCTCT
TATATtgtgatttgatttttAaaaaaattttcttttttagctGGACACTT
CATACGGAGAAGAATATGGAGATTCTTTGGATTATCACACCTTCACTGTT
GTCAACAATCTTCGAAAAGATGGAAAAATCTTCTTGGATTTCGTTCCCAC
ATTCACCATCAAGAAGATCAAGCAACCTTCAGGTAGGTGTTTGTTACAAT
TTTCCCGCTGATATCCGTCTTCATAgctttaatattttcataagcagccg
ccggcagatttttttgaaatattctttttttcCAGGATTAAATACATCTG
TtCttaaaatccaggagcacattttaaggaaaaacacatacaataTTTCC
CAGCGAacaatctgttcaaaaaattcaggagctaaattgtgaaaaacaca
accagatgccatagattttttccagggagcttcgtaattttcttaaaagg
tctattttctagaagcattttaactttcttagggaatggctgttatattt
ttccaggagcataatacTTCTAGAGAAcatatacattttccaggagtccc
attttttcccaaaacagatgatataatccaggaaagcccaggatacagaa
cagatagttttttccaggagaaagggacctcaagaaccGATATTCCATAg
ttcctagccggtggctgctcttgtaGTTTTTATTCTCACCGAGATTACGT
ACTGAAGGCTTCAAACTTCTGGAAAACAGGAAATGTAATAGATTTTTGTC
TTTTATCTTATTTTCAGGGAGATTCAATCAAAAGCAACCGAACTACTCTT
CTTGA Coding sequence (CDS) from alignment at sc0000154_pilon:771654..774408+ >XLOC_034590 ID=XLOC_034590|Name=XLOC_034590|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1914bp|location=Sequence derived from alignment at sc0000154_pilon:771654..774408+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTTTCATCACACTTGCTGCACCAGAAGTTTTCCACAGTCCTGATGATTT
GAATGTTGGAATTTATGGTTTGGAAGGATCGAAACCTGGAGCTGCAGCCT
GTGGCGTTCTTTTGTCTCACCGGAGTTTCATCACACTTGCTGCACCAGAA
GTTTTCCACAGTCCTGATGATTTGAATGTTGGAATTTATGGTTTGGAAGG
ATCGAAACCTGGAGCTGCAGCCTGTGGCGTTCTTTTGTCTCACCGGGTCG
TTGGATTGGATCAAAACGGTTACGGTCGTATTCTTGGCCAATGTCAACTT
GGTGCAAAACTTTTCTACAGCATGTGGGAAACAGTCGCCAGAGATGATGA
TCCTTTCATTTGCTGCAACTTCATTCCACTCGATTTGAAAGAATTACAAG
AAAAAGGATTCTCGTTCAAAACACAACAAGATGTCCATGACTACATCAAG
AAACATATTATCGGTAAACCAAATGAACAACTTGTCAAGAATGTTCACAA
AGAAATCGATTTCTTGGGAATCGTTGGTCCTGACGCTTTGATCAATTCGT
TCACCGTCAACTGTAAGGGTCAAAGCACTGGTAAAGGTCAACAAAATATC
GAGTTGGTCAACGATTTGCAAAATCTTGTCTTCAATGAATTAACTTGTCG
TTGGATTGGATCAAAACGGTTACGGTCGTATTCTTGGCCAATGTCAACTT
GGTGCAAAACTTTTCTACAGCATGTGGGAAACAGTCGCCAGAGATGATGA
TCCTTTCATTTGCTGCAACTTCATTCCACTCGATTTGAAAGAATTACAAG
AAAAAGGATTCTCGTTCAAAACACAACAAGATGTCCATGACTACATCAAG
AAACATATTATCGGTAAACCAAATGAACAACTTGTCAAGAATGTTCACAA
AGAAATCGATTTCTTGGGAATCGTTGGTCCTGACGCTTTGATCAATTCGT
TCACCGTCAACTGTAAGGGTCAAAGCACTGGTAAAGGTCAACAAAATATC
GAGTTGGTCAACGATTTGCAAAATCTTGTCTTCAATGAATTAACTTCGAG
TGTTGGCGAAGACACTAAACGGGTCAAGATGTTTTTGACAACCTCAAAAC
TGGAATATGCAAATTATGGGAAATCCGTCCAACAATTGAAGGAGAGATTG
AATTTACCGACCGAAAATACCCATGATGCACTTGGATTCTCGCTTGGATT
CTTGAGGAACACTTGTATGGAACCATATCAAGCAAGCGAAGCTTATGTGG
AAGTTCTTGGTGATTTATTCAGAAAGACTGTTCTCACTTGCATTGGTGCT
CGAGTGTTGGCGAAGACACTAAACGGGTCAAGATGTTTTTGACAACCTCA
AAACTGGAATATGCAAATTATGGGAAATCCGTCCAACAATTGAAGGAGAG
ATTGAATTTACCGACCGAAAATACCCATGATGCACTTGGATTCTCGCTTG
GATTCTTGAGGAACACTTGTATGGAACCATATCAAGCAAGCGAAGCTTAT
GTGGAAGTTCTTGGTGATTTATTCAGAAAGACTGTTCTCACTTGCATTGG
TGCTctGGACACTTCATACGGAGAAGAATATGGAGATTCTTTGGATTATC
ACACCTTCACTGTTGTCAACAATCTTCGAAAAGATGGAAAAATCTTCTTG
GATTTCGTTCCCACATTCACCATCAAGAAGATCAAGCAACCTTCAGctGG
ACACTTCATACGGAGAAGAATATGGAGATTCTTTGGATTATCACACCTTC
ACTGTTGTCAACAATCTTCGAAAAGATGGAAAAATCTTCTTGGATTTCGT
TCCCACATTCACCATCAAGAAGATCAAGCAACCTTCAGGGAGATTCAATC
AAAAGCAACCGAACTACTCTTCTTGAGGAGATTCAATCAAAAGCAACCGA
ACTACTCTTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000154_pilon | genome | sc0000154_pilon:771654..774408 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 922-957:2720 |
| Aaloc | 778-918:1991 |
| Aaloc | 526-777:1344 |
| Aaloc | 124-522:769 |
| Aaloc | 1-123:1 |
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