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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:872709..874197- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034589 ID=XLOC_034589|Name=XLOC_034589|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1489bp|location=Sequence derived from alignment at sc0000079_pilon:872709..874197- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGCCAGCTCAAGTAATTCAGGCAGTGATTACCCAATTGAAGATAT
CCTTTCCTTGCTTGATGCTGGTTTTTTCGACTGTGAGGAAGAAGTATCGG
AGCAGATTAACTCTATGGAGTCAGATGTAAGTTCCAATGCAAATCTTTGT
TCTTTTTTCACACGTAAACCTTCCCTTTATACCAATAATATTTGCTTTAC
TTTTGACTGCTTTTAAAGTGTAAGGGTGCATGCAATAGTTTCTATACTTA
TGTTTGGTTATGATGTAGGACACCCAAATCAAGCATAGAGCAACATAATC
CAGACCTTTCAAAAATCTTTTCTTTCAATCACTTTAACAATCAAGTTTTC
TTGATTCTTTCAGTTTCAATGATGGAAAATACTTGGAAAATTAACTAATT
GAAAGTTAATAATTCAACTTTTGTTTTCTTTGTCTACAGCTTACAGAAAC
ATCACAAGTGGCAACATTTGATTGTGAAATATGCGGAAAGATTTGCAAGA
CAAAGGGTGGAATAAAGAGACATAAAGCAGCAAAACATCCACACGAAGTG
TATTTGGAAAAAGTTAAAGAGAAGGAGGAAAAAACAAAGATTGCAAGTGA
CAAATTGGGATCGATGGATATTATGAGACTAATCAAAGAATCTGCTGAAA
GATTATCACATGACCAGTGCTATCCAGAGGAGTTTCGATCCCAGTTTATT
GATTTTGAAATTACGCAAAATCAAGGTGATGTAATCTTTAAACAATTGGA
GGAGATCATCTTCAAATACAAGGAAAATAAAAATGACGAATTCCTTGCTG
CTTTTCGGCGAATAACTTCATCAAAACTTGATCTATTATTTACTGACAAA
CGAGTTCATAACCTTCTAATGTTGGAATTTGCTAGCAGTTGTGTAAAGCA
TCTAAAGCCAAATCAAAGTGATGCAAATGTTGATATTAGAACTGCACTGG
GGACAAAGGAGAAGGCAGCCCTCAATTACATAGCCGGACATGCAGTCCAC
AAAATCTATGCAAAACTACGCACCAGTAAACATTGGCGAACAGATATTTT
TCAAAAATCATTTAATCTTTTGAAGAAATTCAAAATTGAACCAACTGACA
TGGAAGAGCATGCTTTGATTAAAGCAAAAAATAGAGGTGGATTGTGGTGT
GTCTCCAAATTAACGGTACAAGTTTTTGAACAAGCTGAACTTTTGTTCAC
AAGTGAAACATGTAGACATGTCACAAGGGTTGACTATAAAGCAATGGTCA
GAAATTTAATGAAAAACTTATTGGTTAAAAAGTATTGGGAACAGCTTTTA
AGTGATTCACCAGAAATAGATACAGATCTTGGGAAAGACTTACTTGATCA
ACTACTCTCTCTTTACCTCAAAATCAGAGGATTTTCATATGCAAAAAGCA
TAAGGGAAAAACACAAGTGTAAAAGCAAGTCAACTCAAAAACACTCTTTG
AGAGCAAATTTGAAAAAATCAGAGAAAGAGGAGCCATAA Coding sequence (CDS) from alignment at sc0000079_pilon:872709..874197- >XLOC_034589 ID=XLOC_034589|Name=XLOC_034589|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2352bp|location=Sequence derived from alignment at sc0000079_pilon:872709..874197- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGCCAGCTCAAGTAATTCAGGCAGTGATTACCCAATTGAAGATAT
CCTTTCCTTGCTTGATGCTGGTTTTTTCGACTGTGAGGAAGAAGTATCGG
AGCAGATTAACTCTATGGAGTCAGATATGGCGGCCAGCTCAAGTAATTCA
GGCAGTGATTACCCAATTGAAGATATCCTTTCCTTGCTTGATGCTGGTTT
TTTCGACTGTGAGGAAGAAGTATCGGAGCAGATTAACTCTATGGAGTCAG
ATCTTACAGAAACATCACAAGTGGCAACATTTGATTGTGAAATATGCGGA
AAGATTTGCAAGACAAAGGGTGGAATAAAGAGACATAAAGCAGCAAAACA
TCCACACGAAGTGTATTTGGAAAAAGTTAAAGAGAAGGAGGAAAAAACAA
AGATTGCAAGTGACAAATTGGGATCGATGGATATTATGAGACTAATCAAA
GAATCTGCTGAAAGATTATCACATGACCAGTGCTATCCAGAGGAGTTTCG
ATCCCAGTTTATTGATTTTGAAATTACGCAAAATCAAGGTGATGTAATCT
TTAAACAATTGGAGGAGATCATCTTCAAATACAAGGAAAATAAAAATGAC
GAATTCCTTGCTGCTTTTCGGCGAATAACTTCATCAAAACTTGATCTATT
ATTTACTGACAAACGAGTTCATAACCTTCTAATGTTGGAATTTGCTAGCA
GTTGTGTAAAGCATCTAAAGCCAAATCAAAGTGATGCAAATGTTGATATT
AGAACTGCACTGGGGACAAAGGAGAAGGCAGCCCTCAATTACATAGCCGG
ACATGCAGTCCACAAAATCTATGCAAAACTACGCACCAGTAAACATTGGC
GAACAGATATTTTTCAAAAATCATTTAATCTTTTGAAGAAATTCAAAATT
GAACCAACTGACATGGAAGAGCATGCTTTGATTAAAGCAAAAAATAGAGG
TGGATTGTGGTGTGTCTCCAAATTAACGGTACAAGTTTTTGAACAAGCTG
AACTTTTGTTCACAAGTGAAACATGTAGACATGTCACAAGGGTTGACTAT
AAAGCAATGGTCAGAAATTTAATGAAAAACTTATTGGTTAAAAAGTATTG
GGAACAGCTTTTAAGTGATTCACCAGAAATAGATACAGATCTTGGGAAAG
ACTTACTTGATCAACTACTCTCTCTTTACCTCAAAATCAGAGGATTTTCA
TATGCAAAAAGCATAAGGGAAAAACACAAGTGTAAAAGCAAGTCAACTCA
AAAACACTCTTTGAGAGCAAATTTGAAAAAATCAGAGAAAGAGGAGCCAT
AACTTACAGAAACATCACAAGTGGCAACATTTGATTGTGAAATATGCGGA
AAGATTTGCAAGACAAAGGGTGGAATAAAGAGACATAAAGCAGCAAAACA
TCCACACGAAGTGTATTTGGAAAAAGTTAAAGAGAAGGAGGAAAAAACAA
AGATTGCAAGTGACAAATTGGGATCGATGGATATTATGAGACTAATCAAA
GAATCTGCTGAAAGATTATCACATGACCAGTGCTATCCAGAGGAGTTTCG
ATCCCAGTTTATTGATTTTGAAATTACGCAAAATCAAGGTGATGTAATCT
TTAAACAATTGGAGGAGATCATCTTCAAATACAAGGAAAATAAAAATGAC
GAATTCCTTGCTGCTTTTCGGCGAATAACTTCATCAAAACTTGATCTATT
ATTTACTGACAAACGAGTTCATAACCTTCTAATGTTGGAATTTGCTAGCA
GTTGTGTAAAGCATCTAAAGCCAAATCAAAGTGATGCAAATGTTGATATT
AGAACTGCACTGGGGACAAAGGAGAAGGCAGCCCTCAATTACATAGCCGG
ACATGCAGTCCACAAAATCTATGCAAAACTACGCACCAGTAAACATTGGC
GAACAGATATTTTTCAAAAATCATTTAATCTTTTGAAGAAATTCAAAATT
GAACCAACTGACATGGAAGAGCATGCTTTGATTAAAGCAAAAAATAGAGG
TGGATTGTGGTGTGTCTCCAAATTAACGGTACAAGTTTTTGAACAAGCTG
AACTTTTGTTCACAAGTGAAACATGTAGACATGTCACAAGGGTTGACTAT
AAAGCAATGGTCAGAAATTTAATGAAAAACTTATTGGTTAAAAAGTATTG
GGAACAGCTTTTAAGTGATTCACCAGAAATAGATACAGATCTTGGGAAAG
ACTTACTTGATCAACTACTCTCTCTTTACCTCAAAATCAGAGGATTTTCA
TATGCAAAAAGCATAAGGGAAAAACACAAGTGTAAAAGCAAGTCAACTCA
AAAACACTCTTTGAGAGCAAATTTGAAAAAATCAGAGAAAGAGGAGCCAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:872709..874197 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 127-1176:1051 |
| Aaloc | 1-126:1490 |
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