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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000438_pilon:152550..154410+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034505 ID=XLOC_034505|Name=XLOC_034505|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1861bp|location=Sequence derived from alignment at sc0000438_pilon:152550..154410+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACCTGGAGCGCGAATATGATTCCACTAAATGATGGAACAGATTTGAG
GGTTTCTTCTATGATCGATCGCATACCTAATCTACCATGCTCAGATTCAC
AAGTATCTTGTATGCCAGATGAAAAAGTTTACACATCACAACAAATCACC
GTCAATAGCTCAACTCCGAATAACGAAGACTGGCGAACGGTAAGACTCGC
TTCTCGtttttttctcgactatttttttctttctctaattttttcttact
ttcttattttAGTTAGTTCCATGTTCCTGTTAGTTCCATCTCAATCTTGA
AATGTATCTTAAGTGATGGAAATACTTTTCTGTAGAGAAATCATGTCACG
GTTAAAGCAACCTTGAATGTTAgaacttgaatttttttgttttttacttt
ctctttttGATGTTAAAGTACCATAACAGCGTGTGCTAGCTAAgtcaaat
aaataaacaaacatGAAGCTACCCCTCAGAgatcagatttttttgttttc
tcttaaCCTTTCAACGTTACACTTAATTTCCATAACAACACTACATACAA
ATTCTTGCTTCAAAACACCGTTGAACTTATTATGAAGGCATTCTCATTAT
AATGACATGACATttctttaattaatttttctccttttgaATTGCTTTCT
CCTATTGTCCTAATGCCGCTTAATGACAGCTTTTTGCAAATTAAATACAA
TAATGAGGCAtcatttgttttgcttttccTTGCATTAATCACCAGTTTGA
AGAGAGGGGCACTTCGAGCTCAAAATGTTCTTTCTAGCCTCGAGAAAGCC
TTCGTTAAGAAAAAGTAGCTACTATAAATTTTTAATTGATCCTTTAGTTT
TAAGTTTAGTAGTAAGATTAAGAATTCTATTCCATTTGTTTCTGTTGGAT
AGCTCCCTTCGTGAAAGGGAGAGTTCCATAACTTTcttctgaattttttg
atgtgcagaaaaagaacaaaacatgacgaaatttacttttctcttcttta
CAGACTTTGAATGAGATGGACGTATACCTTGCTGAGGACGAATTCACTCG
TCAAAATGTTTTCAACAGATCACCAAATAAACCAGTTTGTCTACCTACTT
CAACCATTGTTTCAACACGCCAGCGACGCCCATCCGTCGGCCGTGTGGAA
GAATTTTGCAGTGAAAGCGAAAGTGATTCTTCTTCTACAACATACGATGA
ACCAATGCATGAAAGCAATTCCCTCATGGAACACGAGCAAACACCAATGG
GAAGCCCTGTTTTTCACTGTGCTTCAAACACCGTCAAAACAGAAGTACCT
CCGACTTATTTCGAAAGTATGAAATGTGAGCCCACCAGCCCTTCAACCAT
TTTTACCTCCACCACGACACTTTTCTCACAAAAATTAAACAATACAACAT
CTTCTCTACAAAAATCATTCATCAATCAACCTCCAATCAACGTTCGTCCG
CCACCTTACCTAGATGCAGCCACTATGGCTGCTAAACGTCAAACATATCG
ACAAACAATACCTACAACGAGAGCATTTCCCATCAACTTTAGTTGTGCTC
CACTTAGAGACACTCAGAgtgaaatcatcaaaaataagaaaacacaTAGA
TGCGATTATCCAAACTGCAATAAAGTATACACAAAATCGTCGCACTTGAA
AGCTCACTTCCGTACACATACCGGTGAAAAACCGTACGAATGTCAATGGG
AAGGCTGTGATTGGAAGTTTGCTCGATCTGACGAGCTGACGAGGCATTAT
CGTAAACATACTGGCGACAAACCATTCAAATGTGCACATTGCGATAAAGC
TTTTTCACGATCAGATCACTTAGCTCTTCACAATAGAAAGCATACCAACC
aaaaccattaa Coding sequence (CDS) from alignment at sc0000438_pilon:152550..154410+ >XLOC_034505 ID=XLOC_034505|Name=XLOC_034505|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2094bp|location=Sequence derived from alignment at sc0000438_pilon:152550..154410+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACCTGGAGCGCGAATATGATTCCACTAAATGATGGAACAGATTTGAG
GGTTTCTTCTATGATCGATCGCATACCTAATCTACCATGCTCAGATTCAC
AAGTATCTTGTATGCCAGATGAAAAAGTTTACACATCACAACAAATCACC
GTCAATAGCTCAACTCCGAATAACGAAGACTGGCGAACGATGACCTGGAG
CGCGAATATGATTCCACTAAATGATGGAACAGATTTGAGGGTTTCTTCTA
TGATCGATCGCATACCTAATCTACCATGCTCAGATTCACAAGTATCTTGT
ATGCCAGATGAAAAAGTTTACACATCACAACAAATCACCGTCAATAGCTC
AACTCCGAATAACGAAGACTGGCGAACGACTTTGAATGAGATGGACGTAT
ACCTTGCTGAGGACGAATTCACTCGTCAAAATGTTTTCAACAGATCACCA
AATAAACCAGTTTGTCTACCTACTTCAACCATTGTTTCAACACGCCAGCG
ACGCCCATCCGTCGGCCGTGTGGAAGAATTTTGCAGTGAAAGCGAAAGTG
ATTCTTCTTCTACAACATACGATGAACCAATGCATGAAAGCAATTCCCTC
ATGGAACACGAGCAAACACCAATGGGAAGCCCTGTTTTTCACTGTGCTTC
AAACACCGTCAAAACAGAAGTACCTCCGACTTATTTCGAAAGTATGAAAT
GTGAGCCCACCAGCCCTTCAACCATTTTTACCTCCACCACGACACTTTTC
TCACAAAAATTAAACAATACAACATCTTCTCTACAAAAATCATTCATCAA
TCAACCTCCAATCAACGTTCGTCCGCCACCTTACCTAGATGCAGCCACTA
TGGCTGCTAAACGTCAAACATATCGACAAACAATACCTACAACGAGAGCA
TTTCCCATCAACTTTAGTTGTGCTCCACTTAGAGACACTCAGAgtgaaat
catcaaaaataagaaaacacaTAGATGCGATTATCCAAACTGCAATAAAG
TATACACAAAATCGTCGCACTTGAAAGCTCACTTCCGTACACATACCGGT
GAAAAACCGTACGAATGTCAATGGGAAGGCTGTGATTGGAAGTTTGCTCG
ATCTGACGAGCTGACGAGGCATTATCGTAAACATACTGGCGACAAACCAT
TCAAATGTGCACATTGCGATAAAGCTTTTTCACGATCAGATCACTTAGCT
CTTCACAATAGAAAGCATACCAACCaaaaccattaaACTTTGAATGAGAT
GGACGTATACCTTGCTGAGGACGAATTCACTCGTCAAAATGTTTTCAACA
GATCACCAAATAAACCAGTTTGTCTACCTACTTCAACCATTGTTTCAACA
CGCCAGCGACGCCCATCCGTCGGCCGTGTGGAAGAATTTTGCAGTGAAAG
CGAAAGTGATTCTTCTTCTACAACATACGATGAACCAATGCATGAAAGCA
ATTCCCTCATGGAACACGAGCAAACACCAATGGGAAGCCCTGTTTTTCAC
TGTGCTTCAAACACCGTCAAAACAGAAGTACCTCCGACTTATTTCGAAAG
TATGAAATGTGAGCCCACCAGCCCTTCAACCATTTTTACCTCCACCACGA
CACTTTTCTCACAAAAATTAAACAATACAACATCTTCTCTACAAAAATCA
TTCATCAATCAACCTCCAATCAACGTTCGTCCGCCACCTTACCTAGATGC
AGCCACTATGGCTGCTAAACGTCAAACATATCGACAAACAATACCTACAA
CGAGAGCATTTCCCATCAACTTTAGTTGTGCTCCACTTAGAGACACTCAG
AgtgaaatcatcaaaaataagaaaacacaTAGATGCGATTATCCAAACTG
CAATAAAGTATACACAAAATCGTCGCACTTGAAAGCTCACTTCCGTACAC
ATACCGGTGAAAAACCGTACGAATGTCAATGGGAAGGCTGTGATTGGAAG
TTTGCTCGATCTGACGAGCTGACGAGGCATTATCGTAAACATACTGGCGA
CAAACCATTCAAATGTGCACATTGCGATAAAGCTTTTTCACGATCAGATC
ACTTAGCTCTTCACAATAGAAAGCATACCAACCaaaaccattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000438_pilon | genome | sc0000438_pilon:152550..154410 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 190-1047:1004 |
| Aaloc | 1-189:1 |
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