|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000199_pilon:512783..514230+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034427 ID=XLOC_034427|Name=XLOC_034427|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1448bp|location=Sequence derived from alignment at sc0000199_pilon:512783..514230+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCGGTTGATCGCTGCCCTCGGATGCCTCATCGTCGTTGCATGTAA
GTTAAATTAACCAAtagttttttctcaatttttttttcgcttaAATTTTC
AGCCATTTATTGATTTTCGGTGTCTTTTCCGGCAATGTAGAGGCCTAATT
TCCCCCAATGCGTTCCCCTCCAAACTTTATTGTTCTATTTATGGTAAAAA
TTGAGTCATTGGCATCAATTATGTTCACCTTTTAGATGCATGCACCGATA
GAAGTAAAAATTGTCCTAATTGGGCAAAATCTTCACAAAACTACTGTCAA
ACAAACGGATGGGTCAAGGATAATTGTAAGAAATCTTGCGGCACCTGCCC
TGGCGGAAACGGTGGCTCAGGAGGAAACGGTGGCTCAGGAGGATCTGGAA
GTAATGGACAATGTGGAATTTCCAAAGTCTCACAAAGTCGTGTAGTCAAT
GGTGTTGAAGCCAAACCTGGAGCTTGGCCATGGATCGTGTCTCTCCAAAC
TTCGCGAGGATTCCACTTCTGTGGTGGTTCAATCTTGACTCCGAACTGGG
TAAGCATTATGAAATTAGTATAATTTCCCACATAGAAGTTGAGGGTTCTA
CTTTCcaaaatacaaaagatttttgttttgttttcaagacCGAAATCTCG
TACGCCAAccccccccATTATAATGTCTACGTATCCCCTTTTCCAGTAAA
GAGTACTTAAAGgacttttattttttagattttgactgCTAGCCATTGTG
TTGAACGACAAATGGGTAACCAAAGAGgagtcgttgttgttgttggagcT
CATGACAAAACACGAAGAGAGAGCACTCAACAAAGAATCCAATCTTCTCA
AATCATCATGCACCCAAACTATAAACAAGGAGGTGGTCTCAATGCTGATG
TTGCTTTGATTCGACTTTCATCTCCTCTTAAATTGAACGACCGTGTTGTC
AAAGCTTGCATGCCACAACAAGGAGTCTATCCAAGAGTTGGAAAGAACTG
CTATATTGCCGGTatgattttttcgatttttttttgcttctagAGTAGAG
GAACAGAGTGAATGaactaatttctttttaaatttagaCTAACATTCAAA
TGATCTATTTTTGTAGGATGGGGAGCCACAAATCACCCAGGCACTGGCGC
TCCACCAAAGCTTCAACAAGCTAAGCTTCCAGTTGTTGGTACGCCACACA
GAGGTTGCCATAACAACAAAGAAGTCGTTTGCGTTGGTCTTGGATTCGGA
AAACAATCTGACGGTAAACAACATCCAAACGCATGCCGTGGTGATTCTGG
TGGCCCATTGATGTGTCAACAATCAAACGGATCATGGACTGTTGAAGGTG
TTGCTAGTTATGTTTACACTTATTGTAAATACTACACAGCTTACGCTCCA
GTCAACAAATACTTGCCTTGGATCAAGCAATACGTTCGTGATTTGTAA Coding sequence (CDS) from alignment at sc0000199_pilon:512783..514230+ >XLOC_034427 ID=XLOC_034427|Name=XLOC_034427|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1950bp|location=Sequence derived from alignment at sc0000199_pilon:512783..514230+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCGGTTGATCGCTGCCCTCGGATGCCTCATCGTCGTTGCATATGT
TTCGGTTGATCGCTGCCCTCGGATGCCTCATCGTCGTTGCATATGCATGC
ACCGATAGAAGTAAAAATTGTCCTAATTGGGCAAAATCTTCACAAAACTA
CTGTCAAACAAACGGATGGGTCAAGGATAATTGTAAGAAATCTTGCGGCA
CCTGCCCTGGCGGAAACGGTGGCTCAGGAGGAAACGGTGGCTCAGGAGGA
TCTGGAAGTAATGGACAATGTGGAATTTCCAAAGTCTCACAAAGTCGTGT
AGTCAATGGTGTTGAAGCCAAACCTGGAGCTTGGCCATGGATCGTGTCTC
TCCAAACTTCGCGAGGATTCCACTTCTGTGGTGGTTCAATCTTGACTCCG
AACTGGATGCATGCACCGATAGAAGTAAAAATTGTCCTAATTGGGCAAAA
TCTTCACAAAACTACTGTCAAACAAACGGATGGGTCAAGGATAATTGTAA
GAAATCTTGCGGCACCTGCCCTGGCGGAAACGGTGGCTCAGGAGGAAACG
GTGGCTCAGGAGGATCTGGAAGTAATGGACAATGTGGAATTTCCAAAGTC
TCACAAAGTCGTGTAGTCAATGGTGTTGAAGCCAAACCTGGAGCTTGGCC
ATGGATCGTGTCTCTCCAAACTTCGCGAGGATTCCACTTCTGTGGTGGTT
CAATCTTGACTCCGAACTGGattttgactgCTAGCCATTGTGTTGAACGA
CAAATGGGTAACCAAAGAGgagtcgttgttgttgttggagcTCATGACAA
AACACGAAGAGAGAGCACTCAACAAAGAATCCAATCTTCTCAAATCATCA
TGCACCCAAACTATAAACAAGGAGGTGGTCTCAATGCTGATGTTGCTTTG
ATTCGACTTTCATCTCCTCTTAAATTGAACGACCGTGTTGTCAAAGCTTG
CATGCCACAACAAGGAGTCTATCCAAGAGTTGGAAAGAACTGCTATATTG
CCGattttgactgCTAGCCATTGTGTTGAACGACAAATGGGTAACCAAAG
AGgagtcgttgttgttgttggagcTCATGACAAAACACGAAGAGAGAGCA
CTCAACAAAGAATCCAATCTTCTCAAATCATCATGCACCCAAACTATAAA
CAAGGAGGTGGTCTCAATGCTGATGTTGCTTTGATTCGACTTTCATCTCC
TCTTAAATTGAACGACCGTGTTGTCAAAGCTTGCATGCCACAACAAGGAG
TCTATCCAAGAGTTGGAAAGAACTGCTATATTGCCGGATGGGGAGCCACA
AATCACCCAGGCACTGGCGCTCCACCAAAGCTTCAACAAGCTAAGCTTCC
AGTTGTTGGTACGCCACACAGAGGTTGCCATAACAACAAAGAAGTCGTTT
GCGTTGGTCTTGGATTCGGAAAACAATCTGACGGTAAACAACATCCAAAC
GCATGCCGTGGTGATTCTGGTGGCCCATTGATGTGTCAACAATCAAACGG
ATCATGGACTGTTGAAGGTGTTGCTAGTTATGTTTACACTTATTGTAAAT
ACTACACAGCTTACGCTCCAGTCAACAAATACTTGCCTTGGATCAAGCAA
TACGTTCGTGATTTGTAAGATGGGGAGCCACAAATCACCCAGGCACTGGC
GCTCCACCAAAGCTTCAACAAGCTAAGCTTCCAGTTGTTGGTACGCCACA
CAGAGGTTGCCATAACAACAAAGAAGTCGTTTGCGTTGGTCTTGGATTCG
GAAAACAATCTGACGGTAAACAACATCCAAACGCATGCCGTGGTGATTCT
GGTGGCCCATTGATGTGTCAACAATCAAACGGATCATGGACTGTTGAAGG
TGTTGCTAGTTATGTTTACACTTATTGTAAATACTACACAGCTTACGCTC
CAGTCAACAAATACTTGCCTTGGATCAAGCAATACGTTCGTGATTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000199_pilon | genome | sc0000199_pilon:512783..514230 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 646-975:1119 |
| Aaloc | 361-642:729 |
| Aaloc | 49-360:238 |
| Aaloc | 1-45:1 |
|
