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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000199_pilon:547514..551010+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034426 ID=XLOC_034426|Name=XLOC_034426|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3497bp|location=Sequence derived from alignment at sc0000199_pilon:547514..551010+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATACAATCTGTGTTACACTAAGCTTAATCTGTATAGTAGCTGCTAT
ATCAGCTGAAAGTAAGTATTCAATGATTTTATCTGTAATGTGTGTAAGGC
ATTTGGACCCAATTCGCGAAAGGAATTTTATCTTTGTAATGAAATTCATG
TAGTAGCGTTGTGAGaaaaaaaGTCATGATCAATCATGAGCCATAACGTG
CTGCGGGCATATtcagatctttatttttcgataTTTCTTGAACCACTTTG
TGATTCTATTAATTTCACTGAATTCAATGATAAGAAAGGCAAGCGGATTT
ACTGACACTGACACTGCGTTAGTATCGGAATATGAATCGATGTATTCTCG
TTTCTTCTTTGCAGGATGCGAAGACAAATACCCTGAGAAATGTTACCAAC
AAGTTGTCGTTGGTATCAATGGAGAAAAGCGAAGATGCGGTAGTGGAGAT
TTCTATTGGAATGTTTGCCCTAAATCGTGTGGAGCATGTGGTAAGGAACC
ATAGAAAAATTCTAATGTAACTTTTTATGAGTATTTGGGTGTAATATTCT
AAGATATTATATGTTAAATACGAGCTCCCAAAAAGCTCTATGTCACCAAA
ATTTTGGGATTAGTTCGGCAGCAGCGCCATCGTTATAACTTTACGAGTTC
TATACGTCCAAATAAAGGTGCAAGTCTTTTGGGAAATTCTATTTGGCAAT
TTTATCATGATCATACCTTTAATGTACATTTTCATAGAACAAGAAATGCG
TGACTTGTTTGCCCAAATTTTCAGGTCCCTCCAAAAGAGAAAACACGAAA
CGTTCATGCGACTGCGATAATGTCACTCCTGATTGCGAAGACTATTGTCT
TATGGAACAATTCTGTGATTCCGCATGTAAACAAGGCTTAGCTGGCCCAG
AATGCAACTGTCCAGATCATCCAATTGGCAAAAGAGAAGGTAAAACCATG
TTAATAGACATTTTCATCatttacgtcacgagcaacgcttacctcgtttt
caaaatattgctatggtaattttATTCCCTGGGGAATTCGCTATTTTAAA
AGTAAGAAATGAAGCAtcaagggatttaatcaccttggtaacgGTTTCAA
AACGAAGCAGTCGTCGcactaaaaataatttatgaaaaggccaaTTCCTT
TTTCAATTATACAGTATGCCcggaaaaaaagtgaaacagataGTAGTTAA
ATCTCCAAAAATCTATTATCAAATACACTCCCTTCTTACAAACCTACTGG
GAACCCTTatatatcgtccccggtggaaaattatcctccaaattttgtcc
ccccctgaaaataatcaaataaaccaatcctcactgcaaaatattcccta
ttttttccatccccaatgaactttctgactttaaaacaaagaatttaaat
ccccttTCATAAAACATATATGAATATCAagccccatcgagtttcagtcg
gttaattttatccccactggctgaaaaagtcctaacgggtctgtgagaag
gggtgttcaAATTGGAGTTTAGACAATCAAACTAATGGAATTTCACTGTT
GAATCGTTTAGGTATCCAAAagatataattaaaattttttttttttaact
tgtgTATAATTAGGTATAAAAGATCTGTTctgttttttctctttatttgt
ctttgattttttGAGATATTGAATATTAAGTCAGCACACTGGTTCATTGT
GAGAATCTTGTTCATTTGCGATGAAATCTCAACCTACTATTTGGAAAAGA
CCTACATTCTACTCTAGGCCACCTAAAGTCATGTGATTGATGCACTTATA
ATGTTGAGGGGGAACACACAAAGAATAAAACTTTAATAGTAAAGGAGGGA
AATTGTCCaaaaaaaTctgttttgcacctttgtataAGGTAAGACTATGC
TAACAATAAAAACTTTCTAATTTCCAGCACACGCCAAAAGAAATAATGTC
AAACGAGAGTGCGACTGTCACGATTTCGATTGGGATTTGATTACCCCCGA
TTGTGAGGATTACTGCGTGTTTCAAGAATTTTGTTCAGAAGCATGCATTG
AGGGTATCGGTGGACCCGAATGCGGTTGTCCCGGCCACCCAATCGGCAAA
AGAGGAGGTACATTTTTATGATCATCTTTATGTATCAgtttttgcgggaa
ttaaatttggtgggtttagcagttttcagccaaaattttcatcatttttt
agtTCTTAAAACGTAAAATCAGCATTTTCAGGTCAAATACCAAGTAGTCT
TCGcatcaccaaattaaattcccatcaaaaaattcttttcggCCAACCAA
AAATTAAGGGAACGCCGAAACACTTAAGGTGTATTTAGAACCTTTTATTC
AGTACATCGAAACCAAAGTAGCTAATCTTGGTAAATATGGACGACATCTT
GCGGAACCTTTTTCTTGTTTCTCTATcaattattattaattattaattat
ttattattaagaTTTTTCTCTAGTTTCCATTGGCTATCACACTGTAGTCG
AACTTATGTTATTTTAAGTTTATTCTTGCATCACGAGCATGAATGTCGTT
CCTCTACAGCTTTTCAAATTAGTAGAAACCGAAACTAGAATACCGTAGCG
GGACCGTAGCTCTAGATCgaacataccttatcggggaaaaaatgttgggg
gaaagtgacgaaaattttgagggagtgacgaaatttccccccgacgaatt
ttttccccgatattttatcacccgatcaaaacttttacccgGTTTTCCAA
TCCCGACCAAGATCTTccccgatttttttatttcaacagaAAAAAGGATT
TCTATCGTAGTTTTCCATTTTAAACGTTCCATGGATGTTTCttaacaaaa
caaataaaatgactTTCTTTTCAAACGAGTTCTTTTGCCTAAACAACAAG
CTTATAGTTAAAACTACaatggtttgataaaaaataacaatagtaACACA
ATGTCGGTCGTTGGTCAAGTctttaaaaaatccaaatattaacaaagttt
ttatttaaaagatgtCCCTCATTTCTGGGCATTTTTGACAGCGAGAAAAG
GTAGTAGTTTGTAGCAGTAATTTAATGTTGTGATAAAACTATTGAAACAA
ATGAGCATTACTAAAAATCTTGATAATTCCTTTTTATGCTCTATATTTTA
TCgggaacatttaaaaaatttggtcggggaaaagtgacgaatttgaaatt
ttggttgggggaaagtgacgaaaattcctctaggtgacgaaatttttcac
caacgaaaaaaaacccgactattaaataaaactccgacatttttcccCAA
TAAGGTATACTCTGGTCTATAGCGCATATGATTTACACGAAAACACGAGT
AGAACTCTTTTTTACGTACGCGGTGGTTTCGGTCTATCTTACAATTTTCA
TTTAGTGAAAATCTTTCGTTTTATTAAAGTTATGGCCGGAAAATACCGAC
GCACCATGATGGCAAGGATTATGAAGGAAAAGAGAAACTCAAAGTAG Coding sequence (CDS) from alignment at sc0000199_pilon:547514..551010+ >XLOC_034426 ID=XLOC_034426|Name=XLOC_034426|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1200bp|location=Sequence derived from alignment at sc0000199_pilon:547514..551010+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATACAATCTGTGTTACACTAAGCTTAATCTGTATAGTAGCTGCTAT
ATCAGCTGAAAATGAATACAATCTGTGTTACACTAAGCTTAATCTGTATA
GTAGCTGCTATATCAGCTGAAAGATGCGAAGACAAATACCCTGAGAAATG
TTACCAACAAGTTGTCGTTGGTATCAATGGAGAAAAGCGAAGATGCGGTA
GTGGAGATTTCTATTGGAATGTTTGCCCTAAATCGTGTGGAGCATGTGGA
TGCGAAGACAAATACCCTGAGAAATGTTACCAACAAGTTGTCGTTGGTAT
CAATGGAGAAAAGCGAAGATGCGGTAGTGGAGATTTCTATTGGAATGTTT
GCCCTAAATCGTGTGGAGCATGTGGTCCCTCCAAAAGAGAAAACACGAAA
CGTTCATGCGACTGCGATAATGTCACTCCTGATTGCGAAGACTATTGTCT
TATGGAACAATTCTGTGATTCCGCATGTAAACAAGGCTTAGCTGGCCCAG
AATGCAACTGTCCAGATCATCCAATTGGCAAAAGAGAAGGTCCCTCCAAA
AGAGAAAACACGAAACGTTCATGCGACTGCGATAATGTCACTCCTGATTG
CGAAGACTATTGTCTTATGGAACAATTCTGTGATTCCGCATGTAAACAAG
GCTTAGCTGGCCCAGAATGCAACTGTCCAGATCATCCAATTGGCAAAAGA
GAAGCACACGCCAAAAGAAATAATGTCAAACGAGAGTGCGACTGTCACGA
TTTCGATTGGGATTTGATTACCCCCGATTGTGAGGATTACTGCGTGTTTC
AAGAATTTTGTTCAGAAGCATGCATTGAGGGTATCGGTGGACCCGAATGC
GGTTGTCCCGGCCACCCAATCGGCAAAAGAGGAGCACACGCCAAAAGAAA
TAATGTCAAACGAGAGTGCGACTGTCACGATTTCGATTGGGATTTGATTA
CCCCCGATTGTGAGGATTACTGCGTGTTTCAAGAATTTTGTTCAGAAGCA
TGCATTGAGGGTATCGGTGGACCCGAATGCGGTTGTCCCGGCCACCCAAT
CGGCAAAAGAGGAGTTATGGCCGGAAAATACCGACGCACCATGATGGCAA
GGATTATGAAGGAAAAGAGAAACTCAAAGTAGTTATGGCCGGAAAATACC
GACGCACCATGATGGCAAGGATTATGAAGGAAAAGAGAAACTCAAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000199_pilon | genome | sc0000199_pilon:547514..551010 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 535-600:3432 |
| Aaloc | 355-531:1930 |
| Aaloc | 190-351:777 |
| Aaloc | 64-186:367 |
| Aaloc | 1-60:1 |
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